mRNA_L-elsbetiae_contig814.17137.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig814.17137.1
Unique NamemRNA_L-elsbetiae_contig814.17137.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A6H5JG25_9PHAE (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG25_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 1.910e-98
Identity = 164/211 (77.73%), Postives = 180/211 (85.31%), Query Frame = 3 
Query:   60 MPADTLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAAGGAGDDE--TPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLTEAAELGSVLP 686
            MP DTLSNDDLTRLYTWVDEIKLSRPKRNI RDFSDGVLVAEVVA+YFPKLVDLHNYAAANAV QK YNWNTLN+KVLKKMQ+QIPKADVDAVVQCKPGAIE+VLYTLQLKMAQYR R+KAGW AS+S+RAEQ A KT+G    +GG G +   +PE++QAL  REEE QELRETNELLRLKITKLEQ          RLTEA+E+G +LP
Sbjct:   21 MPTDTLSNDDLTRLYTWVDEIKLSRPKRNITRDFSDGVLVAEVVAFYFPKLVDLHNYAAANAVGQKTYNWNTLNDKVLKKMQYQIPKADVDAVVQCKPGAIEKVLYTLQLKMAQYRERSKAGWGASSSSRAEQGA-KTSGG---SGGVGVEVAMSPEDKQALADREEETQELRETNELLRLKITKLEQXXXXXXXXXXRLTEASEVGGMLP 227
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: D7FHM0_ECTSI (CH_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM0_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 8.220e-67
Identity = 125/177 (70.62%), Postives = 140/177 (79.10%), Query Frame = 3 
Query:  162 SDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAAGGAGDDE--TPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLTEAAELGSVLP 686
            S   ++ EVVA+YFPKLVDLHNYAAANAV QK YNWNTLNEKVLKKMQ+QIPKADVDAVVQCKPGAIE+VLYTLQLKMAQYR R KAGW AS+S+R+EQ A KT+G    +GG G +   +PE++QAL  REEE QELRETNELLRLKITKLE            LTEAAE G +LP
Sbjct:    5 SQRCMLPEVVAFYFPKLVDLHNYAAANAVGQKTYNWNTLNEKVLKKMQYQIPKADVDAVVQCKPGAIEKVLYTLQLKMAQYRERCKAGWGASSSSRSEQDA-KTSGG---SGGVGMEVAMSPEDKQALADREEETQELRETNELLRLKITKLEXXXXXXXXXXXXLTEAAEAGGMLP 177
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A8J2WVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVQ1_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.760e-59
Identity = 112/200 (56.00%), Postives = 143/200 (71.50%), Query Frame = 3 
Query:   66 ADTLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAAGGAGDDETPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLTEAA 665
            A  + +D+L RLY WVDEI LSRPKRNIARDF+DGVL AEV  +YFP+LVDLHNY  AN++RQK YNW+TLN +VL+K+   +P+ADV+AV QC PGA+E+VL TLQLKMA+YRA  +   EA A+ +A   A     A   A    D +    ++ L  +E+E  +LRET ++L  KI KLEQLVRLKDAKI +L +AA
Sbjct:    2 AAMMDDDELQRLYAWVDEIPLSRPKRNIARDFADGVLAAEVCHHYFPRLVDLHNYPPANSMRQKLYNWDTLNARVLRKLDAALPRADVEAVCQCAPGAVERVLNTLQLKMARYRANQQRRKEAKATTQANNEAVAPPPAKAKASLQADVD----QELLVEKEQEIHDLRETVDILEQKIAKLEQLVRLKDAKIQKLKDAA 197
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A7S1CID1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID1_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.590e-48
Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 3 
Query:   66 ADTLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRAR 413
            A  L +D L ++Y+WVDEI LSRPKRNI RDFSDGV++AEVVA+YFP+LV++HNY+ AN+VRQK YNW TLN+KV KK+   + K DVDAVV CKPG +E VLY LQ KMA YRAR
Sbjct:   47 AAPLDDDQLQKIYSWVDEIPLSRPKRNITRDFSDGVMMAEVVAHYFPRLVEMHNYSPANSVRQKLYNWATLNQKVFKKLGFAVAKPDVDAVVNCKPGVVESVLYQLQSKMAAYRAR 162
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A7S0JIM5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIM5_9EUKA)

HSP 1 Score: 167 bits (423), Expect = 3.510e-48
Identity = 111/223 (49.78%), Postives = 140/223 (62.78%), Query Frame = 3 
Query:   75 LSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAK-----AGWEASASAR---------AEQSADKTAG-------AGRAAGGAGDDETPENR--------QALTAREEEN-QELRETNELLRLKITKLEQLVRLKDAKILRL 653
            L +DDL R+YTWVDEI LSRPKRNIARDFSDGVL+AE+VA+YFPKLV++HNY AAN+  QK YNWNTLN KV KKM   + + ++DA+  C+P A+E+ L  LQ +MA+Y AR       AG   S+ +          A QS   TA        A R A G G  +    +        Q L A ++ N  ELRET ++L +KI KLEQLVRLKD+KI+ L
Sbjct:    6 LDDDDLQRIYTWVDEIPLSRPKRNIARDFSDGVLMAEIVAHYFPKLVEMHNYPAANSYAQKIYNWNTLNAKVFKKMGFALRQEEMDALCNCQPQAVEKTLKNLQQRMAKYGARQAEISRVAGGNGSSPSTDVAQESGVAAPQSVRSTAPHSAAGVQAAREARGVGGAQAKLGQLGLHDSALQELLAEKDHNIHELRETVDILEMKIQKLEQLVRLKDSKIVTL 228
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: R1C9R5_EMIHU (Calponin-homology (CH) domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C9R5_EMIHU)

HSP 1 Score: 166 bits (419), Expect = 6.130e-48
Identity = 97/196 (49.49%), Postives = 138/196 (70.41%), Query Frame = 3 
Query:   75 LSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGA-----GRAAGGAGDDETPENRQALTAREEEN-QELRETNELLRLKITKLEQLVRLKDAKI 644
            + +D+L R+YTWVDE+ LSRPKRNIARDF+DGVL AE+V +YFP++V++HNY +AN+  QK YNW TLN +V KKM  Q+ + ++DA+  C+P A+E++L  LQ+++++Y +R+K   EA+      Q+  ++A A     G  AGGA         Q L A +++N  ELRET E+L +KI KLEQLVRLKD+KI
Sbjct:    1 MDDDELQRIYTWVDEVPLSRPKRNIARDFADGVLTAEIVHHYFPRIVEVHNYPSANSYAQKMYNWQTLNARVFKKMGWQLRQEELDAICSCQPQAVERMLKQLQVRLSKYGSRSKEE-EAAPQRPHAQATPRSAAAPPRRVGGLAGGAQVGLRDGAVQELLAEKDQNISELRETVEILEIKIQKLEQLVRLKDSKI 195
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A383W7R9_TETOB (Calponin-homology (CH) domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W7R9_TETOB)

HSP 1 Score: 164 bits (416), Expect = 1.640e-47
Identity = 97/196 (49.49%), Postives = 130/196 (66.33%), Query Frame = 3 
Query:   60 MPADTLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTA-GAGRAAGGAGDDETPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKI 644
            M   +++ +DL  LYTWVDEI LSRPKRNI+RDF+DGVL+AEVVA YFPKLV+LHNY++AN ++QK YNWNTLN KVLK++  Q+ K  +  +    PGAIEQ L  ++LK+A Y+  +        + R E S++    G+      A   +   + + L  +E    ELRETNE+L  K+ KLEQLV+LKDAKI
Sbjct:    1 MDTSSMNEEDLQGLYTWVDEIPLSRPKRNISRDFADGVLLAEVVANYFPKLVELHNYSSANGMQQKLYNWNTLNSKVLKRLGLQLSKQHMTEIANGTPGAIEQALQVVKLKIAAYQEPSSGR----TTPRGEPSSNNMCMGSSSKVSAARLQQAAISSEVLAEKERTIVELRETNEILETKVRKLEQLVKLKDAKI 192
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A835Z5Z0_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.970e-47
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 3 
Query:   75 LSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAA---GGAGDDETPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLTEAAE 668
            L+++DL +LY WVDEI LSRPKRNIARDFSDGVL AEVVA+YFP+LV+LHNY+AAN+V QK YNW TLN KV +++  Q+ + D++A+ QCKPGA+E++LY LQL+MA YRA+ +     SA +   ++   T+  G  +   GG G         +   R      LR    +L  K+ +LEQLV +KD KI RL  A +
Sbjct:    5 LTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGG---------SAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQ 196
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BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A1Y1I7X9_KLENI (Calponin-homology (CH) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I7X9_KLENI)

HSP 1 Score: 165 bits (417), Expect = 2.090e-47
Identity = 103/210 (49.05%), Postives = 132/210 (62.86%), Query Frame = 3 
Query:   75 LSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKA--------GWEASASARAEQSADKTAGAGRAA---GGAGDDETPENR-----QALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLT 656
            LS  +L  LYTWVDEI LSRPKRNIARDFSDGVL AE+VA+YFPK V+ HNY+ AN   QK YNWNTLN KV KK+Q  + + +++A+  C PGAIE++L  L++K+A+Y+   +         G E  AS    Q    +      A   GGA    T   R     +A+  ++ +  ELRETNELL  K+ KLEQLVRLK++KI  LT
Sbjct:    7 LSEAELQNLYTWVDEIPLSRPKRNIARDFSDGVLAAEIVAHYFPKTVETHNYSQANGFAQKMYNWNTLNLKVFKKLQFSVTREEIEAISNCVPGAIEKLLKQLKVKIAKYKPGRRPSSSEGPAPGTEGMASQSGHQRRGDSLSPNSKALSYGGANGTATDPTRRFQDLEAVAEKDAKILELRETNELLDSKVKKLEQLVRLKESKIQALT 216
[Close]
BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Match: A0A7S4FAW6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAW6_CHRCT)

HSP 1 Score: 166 bits (419), Expect = 4.110e-47
Identity = 109/217 (50.23%), Postives = 141/217 (64.98%), Query Frame = 3 
Query:   72 TLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPKLVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGAIEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAA-----GGAGDDETP---------ENRQA-----------LTAREEEN-QELRETNELLRLKITKLEQLVRLKDAKI 644
            ++ +++L R+YTWVDE+ LSRPKRNIARDF+DGVL AE+VA+YFPKLV++HNY AAN+  QK YNWNTLN KV KKM  Q+ + ++DA+  C+P A+E++L  LQ +MA+Y AR KA  E  +     QSA   +   RAA     GG G    P         E R A           L A ++ N QELRET ++L +KI KLEQLVRLKD+KI
Sbjct:   49 SMDDEELQRIYTWVDEVPLSRPKRNIARDFADGVLTAEMVAHYFPKLVEMHNYPAANSYAQKIYNWNTLNAKVFKKMGFQLKQEEMDALCNCQPQAVEKMLKNLQQRMAKYGAR-KA--EQDSGDAPPQSAAPPSRVPRAAAPGPNGGIGSVSPPGAARGVAAAEARMANMGLHDGSVQELLAEKDHNIQELRETVDILEVKIQKLEQLVRLKDSKI 262
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig814.17137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG25_9PHAE1.910e-9877.73Calponin-homology (CH) domain-containing protein n... [more]
D7FHM0_ECTSI8.220e-6770.62CH_2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J2WVQ1_9STRA4.760e-5956.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1CID1_9STRA1.590e-4867.24Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0JIM5_9EUKA3.510e-4849.78Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
R1C9R5_EMIHU6.130e-4849.49Calponin-homology (CH) domain-containing protein n... [more]
A0A383W7R9_TETOB1.640e-4749.49Calponin-homology (CH) domain-containing protein n... [more]
A0A835Z5Z0_9STRA1.970e-4749.25Calponin-homology (CH) domain-containing protein n... [more]
A0A1Y1I7X9_KLENI2.090e-4749.05Calponin-homology (CH) domain-containing protein n... [more]
A0A7S4FAW6_CHRCT4.110e-4750.23Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig814contigL-elsbetiae_contig814:3176..7385 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.9
Seed ortholog evalue1.3e-39
Seed eggNOG ortholog653948.CCA22721
Preferred nameUBL5
KEGG rclassRC00002,RC00078
KEGG koko:K00948,ko:K10643,ko:K13113,ko:K20524
KEGG ReactionR01049
KEGG Pathwayko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04212,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04212
KEGG ModuleM00005
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000746,GO:0000747,GO:0000753,GO:0000767,GO:0000902,GO:0002682,GO:0002684,GO:0003006,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005737,GO:0005829,GO:0005937,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006986,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019538,GO:0019953,GO:0022414,GO:0023051,GO:0023056,GO:0031347,GO:0031349,GO:0031386,GO:0032502,GO:0032989,GO:0032991,GO:0033554,GO:0034121,GO:0034123,GO:0034124,GO:0034126,GO:0034514,GO:0034620,GO:0034641,GO:0035966,GO:0035967,GO:0036211,GO:0042221,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044798,GO:0045088,GO:0045089,GO:0045292,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0080134,GO:0090304,GO:0120025,GO:1901360,GO:1901564
EggNOG free text desc.protein tag
EggNOG OGsKOG3493@1,KOG3493@2759
EC2.3.2.27,2.7.6.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03041,ko04121,ko04131
Ec32 ortholog descriptionProtein of unknown function DUF1042
Ec32 orthologEc-24_004040.1
Exons5
Model size689
Cds size630
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig814.17137.1prot_L-elsbetiae_contig814.17137.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig814 3176..7326 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816898.3531628-CDS-L-elsbetiae_contig814:3175..33011622816898.3531628-CDS-L-elsbetiae_contig814:3175..3301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 3176..3301 -
1691683896.4140077-CDS-L-elsbetiae_contig814:3175..33011691683896.4140077-CDS-L-elsbetiae_contig814:3175..3301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 3176..3301 -
1622816898.3644164-CDS-L-elsbetiae_contig814:3603..37981622816898.3644164-CDS-L-elsbetiae_contig814:3603..3798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 3604..3798 -
1691683896.426074-CDS-L-elsbetiae_contig814:3603..37981691683896.426074-CDS-L-elsbetiae_contig814:3603..3798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 3604..3798 -
1622816898.3745544-CDS-L-elsbetiae_contig814:4792..48731622816898.3745544-CDS-L-elsbetiae_contig814:4792..4873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 4793..4873 -
1691683896.436633-CDS-L-elsbetiae_contig814:4792..48731691683896.436633-CDS-L-elsbetiae_contig814:4792..4873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 4793..4873 -
1622816898.3869977-CDS-L-elsbetiae_contig814:5519..56211622816898.3869977-CDS-L-elsbetiae_contig814:5519..5621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 5520..5621 -
1691683896.447203-CDS-L-elsbetiae_contig814:5519..56211691683896.447203-CDS-L-elsbetiae_contig814:5519..5621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 5520..5621 -
1622816898.398479-CDS-L-elsbetiae_contig814:7200..73261622816898.398479-CDS-L-elsbetiae_contig814:7200..7326Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 7201..7326 -
1691683896.457446-CDS-L-elsbetiae_contig814:7200..73261691683896.457446-CDS-L-elsbetiae_contig814:7200..7326Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig814 7201..7326 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816898.4113033-UTR-L-elsbetiae_contig814:7326..73851622816898.4113033-UTR-L-elsbetiae_contig814:7326..7385Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig814 7327..7385 -
1691683896.4676394-UTR-L-elsbetiae_contig814:7326..73851691683896.4676394-UTR-L-elsbetiae_contig814:7326..7385Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig814 7327..7385 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig814.17137.1

>prot_L-elsbetiae_contig814.17137.1 ID=prot_L-elsbetiae_contig814.17137.1|Name=mRNA_L-elsbetiae_contig814.17137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
MPADTLSNDDLTRLYTWVDEIKLSRPKRNIARDFSDGVLVAEVVAYYFPK
LVDLHNYAAANAVRQKAYNWNTLNEKVLKKMQHQIPKADVDAVVQCKPGA
IEQVLYTLQLKMAQYRARAKAGWEASASARAEQSADKTAGAGRAAGGAGD
DETPENRQALTAREEENQELRETNELLRLKITKLEQLVRLKDAKILRLTE
AAELGSVLP*
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mRNA from alignment at L-elsbetiae_contig814:3176..7385-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig814.17137.1 ID=mRNA_L-elsbetiae_contig814.17137.1|Name=mRNA_L-elsbetiae_contig814.17137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4210bp|location=Sequence derived from alignment at L-elsbetiae_contig814:3176..7385- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGAATCGAATTTTTCCGGCGAGACCCAACGAGACTTGACACACGATA
GCTCGATCCATGCCCGCCGATACGCTGAGCAACGACGACCTGACCCGGCT
GTACACATGGGTCGATGAGATCAAGCTCTCTAGACCCAAGCGAAACATTG
CGAGAGACTTCAGCGATGGCGTTCTCGTCGCCGAGGTAAGGACAGACCAG
GATACGGAGCCGTAACGGTCCATATAATCCGCATACTATATCTCTGTCTC
TCTCTCGCTCTGTGTGTGTGACTCTGTCTCTGTCTCTGTCTCTCTTCGAA
GATCGTTGATCTGCAGCTAGATAGGGAGTGATTCGTGCCACTCATTTCAA
CCGAGTTAGCGAAGGTCGGACGAATAAGGTATCCACAGATCTCACTCGGA
TCCACTCTTCTTTCAACTTTAGGGGGGGGGGGTTGCTTGCTCCCGACAGG
GGGAGTTCCTGTGTTATACACGTATGGTTTTGCTACTTGTTCTCGTGTAC
GCTGGCTTAGGCCCACGCCCGCATCAACACACAAACCGATGTAGTCGCCA
CGCAGGCATTTGCTTCAACCTGCACCGTTCACAGTAACATTTACGTAGAC
TAGACCTGTAGAAGTACATACACTGTGTGTTTCTGTGCTCCGTCACAGCA
ACAGCCTTTGCGTGCGATAACTTATTCCAGCGAAACCAAGACAGAGGCTG
ATGCATGCGCTTATGCTATGCCACTGGGACACGGAGGTGTTCTGCATACA
ACAGGCCAGGAAAGGGAGACACACAGTAGGACCAGGGTTGTGCATCGGCG
CAGCACGTAGATGGATATACTGCTGCACTGCGTTTGGAGGGAGTGCGATG
AGCAAAGGGGCGTCCTCTAGATATGTGATTGACCAAATGACCAATTACGA
CTAGTCTATGTAGTCTAATCTATCTCGACAATCTTTGTGTTTCACAGACT
CGTTACCAGTTACGAGGCTTTCTAGACCATTCTCGCCCGGGTCTTGGTTG
GGTTTCGCACAGTTACGAAGTTAGTTGATTGTCTGCACACACGAGTTGCT
TCGACTTTAAATGCCATGCTTGTTGGCGAGGCTCGAAAACAAACGCAGCA
GGTTTGCCTATCTAAATGGTGTCATGTCGTGGGGACACCTTCAAATAAGA
TAACCTTGAAACAAAATAGGAGTAGGGGCGAGCACTGAGTAGGCGTCATG
CCACCCCGGTGTAGTTAGGATCCTCGTAACTCTTCTGTATCCGTCGGGCT
ATGGGCTAGTCAGGCTATGGGTTCGAATCCCTGGTGAGCGGGCTTCTACT
TGCAAAAATAATTTCATCTAGCTTTCGTTCCCGGTAGTGGAAAGCTCTTG
TTCATGACACACGAGGCAAGATACTGCCGAATTCTTCTCGCGTTGAAAAT
CGAAGGCCAGCACCGCCGAGCCGCAGGAGGGGGTCCAGCCCCCTCCCTCC
TGTACGACCCCGGTTGGATCGTCTGGCTAGTCGTAGTGGAGGAAGGGGGC
CAGTGGGGCAGACCACGAGTACAGCCAAATGCTGGGAGGGGGGAAAAAAA
CGCAGAGGGGGGGGGGGGGGGGGCTCAGCAGATGCATCAGCATATATGAC
CACAGACCAGAACTCTGGCGCAAAATCCCCCGAGCGCTGGGTTGTAATGT
GCTGAAGAAAAGAAGAAAATATGCACTGTCGTATCACGAATAATACTTCC
GACGCTAAGAGCATCTCGACCCCTCGCAACGCCACCGTTCCAAAACCTGC
TGGCGTCGTCACAGGTGGTGGCATACTACTTCCCAAAGCTGGTCGACCTC
CACAACTACGCAGCTGCCAACGCCGTGAGACAGAAAGCCTACAACTGGAA
CACCCTCAACGAGAAGGTAAGGCATGCACGGGGTGCCAAGGCCATGTGCC
ATAGCAGTAAAAACTGCTGTACATTCGTTCAGGCGCGTTCGTGCTGGATA
ATCGATGCACCAGAACGCGCTCCCTCCTCTGATTTTAAGGGCCAAAACGC
CTCTTCCTCTGACTAGGGCCAAAACCTCTCACGAACCAGGTTTTTCCTTG
CACGAGCTGCTTCGTATGGAACGCGTTCCCGCGGTGGCGGTGGTCCAAAA
CCACACGAATTGTCTCGATATTGTCTCAAAACAAACAAGCAAGCGAGTTG
CTGCTGTACGGGTTTTGTACCCTAGTACCTAGTAGGCTTTTTGCAGCAGA
GCCCCCAATTCTGAAAAAAAAGTGGTTGTGGGAGATTTTTCACTCTATTT
CCTTGATAAATACCCCCCCTTGTGGGAGCGTGCTGCAGGAAAGCCTATTC
ATTGTAGTTGGGGGCCGGTGAGGGAGGTTCAGGGCCTTGACAAGCCCCCC
TGAAAAAACCTGTTTTGATAAGTTGGGTGAAGACTGCCGGCGTTTAGTCC
TAAAAATAAAAATGTGTGTTCTGTGGGTATACCATACAATACACGGACAT
GACATCCTCATGACTTCTTGCGCCGAATGGCCTTGACTATGGTTCTATTT
ACTTCGCGGCAGGTTCTGAAAAAGATGCAGCACCAGATTCCCAAGGCAGA
TGTGGATGCGGTCGTGCAGTGCAAGCCGGGTGCAATTGAGCAGGTAAAAC
AGCAGTATGCATGATATATATTTGAGTTCCTCCCATTATTGGCATGTTCG
TCGTCTGCCCCCCCACTCGCCCCCATACTCCACTACGACTAGCTAGACGA
CCCAACCGGAGTCACACTACTACTGTACGCCCGTAGGTCTGGTGGGCTCG
CTGTTTTAGGTTGAGCCTGCGCAAGATCCCCATCGATTTCGCCGGAGGGT
TGATCTGTGTCTCCTGCTCAGGGTGGCGTCCATGCTCCCACGGAGTAAAG
GATCGTGTAGACCGAGTCCTGCGCACGCTTGGCTTTTCTCCCCGTGAATC
GTGTTGATGTTCACCTGTGACAACAGTAGTCCCGGCAGTTTCTCTTGACA
CACCCACCGACAGAAATAATGTTCTTGCGTGCGTGCGCACGTGCTCCAAA
AATACTCGCGCCAAACTGATCGACCGATCACAGCAAGCAGTAGTTTTGCG
CTTGGCCCTCCGCCTCGGCAAGTGGCCCAAAACCAGCAAACGTCTCTGGC
CGCTTCTTTTCCCGAAAATCCTACCGCACTCTCGGCCCCCTTGCATGAGA
ACTGTTGTTGCTGTTGTTTCTTAACATTAAAAACCGTTCCGATCGCTCCG
CCCAGTACCTCCCTATGCCCGTACAATCCAACACTTGATGCGGTCAGTTC
CCGTGGTCACAAGGCTAACTTACGCATACCTAAAAAAAAAGAAATATCTC
GTCACTAAATATATGGAATACATACCGGTCGAACCCCACGGATCCCGTCT
CAAGTGTGGGCCTACACAGTAGGTTCCGTTTTTCGTCACCTGGTGTATAT
CTTTCAAAATGGACTCGAAGGGCCAGTCAGCAAAGCGATAGTAATAAAAA
CATACGAAAGTTTTTGTGCAAAAAAAAACTCGCTCTCCGCTCATTTTTTT
CGCGCAAGATATTTTTTCGCGCAAAAACTACTACTAAAATGCATGCATGT
ATGTACCTCGTGTATATACACACCGCTACTGCTGTAGGTGTTGTACACGC
TACAATTGAAGATGGCCCAGTACCGAGCGAGAGCGAAGGCCGGCTGGGAG
GCGTCCGCGTCGGCCAGAGCAGAGCAGAGCGCCGACAAGACGGCCGGGGC
CGGGAGAGCGGCGGGTGGGGCGGGAGACGATGAAACCCCCGAAAACAGGC
AGGCGCTGACGGCCAGGGAGGAAGAAAACCAGGTGCACGCGCGAACACGC
GAATCGATGCGCACCCAGCTCGCGCCCCCTGTTGAGGTGTAGACTACACA
ATATCCACTGAGATAACAGTAGTAGCGCTGACTGGTATGTTTCTCAATGG
ATAGTTATCGTGTACACCCCGGTTGTACTTATGTCAAGGCGTACACGATA
TCCACTGAGATAGCAGTCAGCAATCCCATCCGTATCCGTAAGAATATCAG
AACCAAAACAGCCACATGAGCATTAATTCAAGGAATTTGAGCACATTTTT
GTTCCACCGCCGTTATGCCGGACTGCACACGCAGGAGCTCCGGGAGACGA
ACGAACTACTCCGACTCAAGATCACCAAGCTCGAGCAGCTGGTGCGCCTC
AAAGACGCCAAGATCCTGCGTCTCACCGAAGCCGCCGAGCTCGGGAGCGT
CTTGCCATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig814:3176..7385-

>mRNA_L-elsbetiae_contig814.17137.1 ID=mRNA_L-elsbetiae_contig814.17137.1|Name=mRNA_L-elsbetiae_contig814.17137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1260bp|location=Sequence derived from alignment at L-elsbetiae_contig814:3176..7385- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCCGCCGATACGCTGAGCAACGACGACCTGACCCGGCTGTACACATG
GGTCGATGAGATCAAGCTCTCTAGACCCAAGCGAAACATTGCGAGAGACT
TCAGCGATGGCGTTCTCGTCGCCGAGATGCCCGCCGATACGCTGAGCAAC
GACGACCTGACCCGGCTGTACACATGGGTCGATGAGATCAAGCTCTCTAG
ACCCAAGCGAAACATTGCGAGAGACTTCAGCGATGGCGTTCTCGTCGCCG
AGGTGGTGGCATACTACTTCCCAAAGCTGGTCGACCTCCACAACTACGCA
GCTGCCAACGCCGTGAGACAGAAAGCCTACAACTGGAACACCCTCAACGA
GAAGGTGGTGGCATACTACTTCCCAAAGCTGGTCGACCTCCACAACTACG
CAGCTGCCAACGCCGTGAGACAGAAAGCCTACAACTGGAACACCCTCAAC
GAGAAGGTTCTGAAAAAGATGCAGCACCAGATTCCCAAGGCAGATGTGGA
TGCGGTCGTGCAGTGCAAGCCGGGTGCAATTGAGCAGGTTCTGAAAAAGA
TGCAGCACCAGATTCCCAAGGCAGATGTGGATGCGGTCGTGCAGTGCAAG
CCGGGTGCAATTGAGCAGGTGTTGTACACGCTACAATTGAAGATGGCCCA
GTACCGAGCGAGAGCGAAGGCCGGCTGGGAGGCGTCCGCGTCGGCCAGAG
CAGAGCAGAGCGCCGACAAGACGGCCGGGGCCGGGAGAGCGGCGGGTGGG
GCGGGAGACGATGAAACCCCCGAAAACAGGCAGGCGCTGACGGCCAGGGA
GGAAGAAAACCAGGTGTTGTACACGCTACAATTGAAGATGGCCCAGTACC
GAGCGAGAGCGAAGGCCGGCTGGGAGGCGTCCGCGTCGGCCAGAGCAGAG
CAGAGCGCCGACAAGACGGCCGGGGCCGGGAGAGCGGCGGGTGGGGCGGG
AGACGATGAAACCCCCGAAAACAGGCAGGCGCTGACGGCCAGGGAGGAAG
AAAACCAGGAGCTCCGGGAGACGAACGAACTACTCCGACTCAAGATCACC
AAGCTCGAGCAGCTGGTGCGCCTCAAAGACGCCAAGATCCTGCGTCTCAC
CGAAGCCGCCGAGCTCGGGAGCGTCTTGCCATAGGAGCTCCGGGAGACGA
ACGAACTACTCCGACTCAAGATCACCAAGCTCGAGCAGCTGGTGCGCCTC
AAAGACGCCAAGATCCTGCGTCTCACCGAAGCCGCCGAGCTCGGGAGCGT
CTTGCCATAG
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