mRNA_L-elsbetiae_contig812.17112.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A6H5J8E2_9PHAE (6-pyruvoyltetrahydropterin synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8E2_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 1.250e-157 Identity = 312/565 (55.22%), Postives = 360/565 (63.72%), Query Frame = 1 Query: 139 EWNAVEVLRAGPNPRWKCKSCNTNYTGAPRRIAQHILGVGGIGQIRACPRPRQEYITLMADLMVLDKASGRLVRKTTYGFENKVVGAAEGXXXXXXXXXEDXXXXXXXXXXXXXDGVPSPVKAPKRNPHSAARGSGDHLSAAAXXXXXXXXPAGVSP------------ERFEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGEVCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVPPSEDKIQDPPFRSAKRVQACF---GRNDENDGCSVSFSGXXXXXXXXXXXXXXXXXXXE-MDVSAGMGVNELSPNTD-GAGFLGLSNQNRLRQQAVSPFGAGELSGXXXXXXXXXXXXXXXXXXXXXXXRALSLGSPPSSGVMVGRVHLGGAEAXXXXXXXXVGMLSXXXXXXXGGPGVFGAGAGGMVPGLRSNH----STGSTQEFAS--QGGGGGGVLGLGQNVPMPPTSG 1764 EW+AV+VLR+GPNPRW+CKSC+T YTGAPRRIAQHILGVGG+GQIR CPRP +EY+TLMADLM LDK SGRLVRKT ++ ++ + XXXXXXXXXXXX + AR G XXXXXXXX ERFEV+VAKEDFKFSSSHFVAF+GFRERLHGHNYSC +RLRGEVCEDGYVVDFG+VKKVMRKLCK LNERFLCPMESDAL+ITLTG+QVVIVCQDGATFVLPRDDCALLPLV+STAEEL+HFLF+RLLREF+L YLHSRGVT+MDVSVAELPRQEA YRG +PPSED IQDPPFR+A+RV+ CF N+ +GCS++FSG MDV GVN+L P+T G G G G + LG+PP +GVMVGRVHLGGAE XX XXXXXXX V G + PGLR N + +++ FA+ +G G GG L GQ+ P ++G Sbjct: 7 EWSAVDVLRSGPNPRWRCKSCSTVYTGAPRRIAQHILGVGGVGQIRPCPRPLKEYVTLMADLMALDKQSGRLVRKTRLSGKDGTSSSSS--------VRDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXATARWGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERFEVYVAKEDFKFSSSHFVAFEGFRERLHGHNYSCGVRLRGEVCEDGYVVDFGIVKKVMRKLCKGLNERFLCPMESDALDITLTGSQVVIVCQDGATFVLPRDDCALLPLVNSTAEELSHFLFSRLLREFTLPYLHSRGVTEMDVSVAELPRQEAIYRGKIPPSEDMIQDPPFRTARRVRGCFEDSNNNNNEEGCSITFSGCASKMDTTSTPGGGVYNHHSHMDV----GVNDLPPHTACGGGGADXXXXXXXXXXXXXVLGVGP------GWNPSVVPPAAPGGGLPDSGGGVVLGNPPGTGVMVGRVHLGGAEPGGVGGGXXXXXXXXXXXXXXXAGDVRGGIMNPLAPGLRPNSIPTPAAVASRGFAAGQRGRGRGGGLQEGQDFSSPESTG 553
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A835ZBF3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF3_9STRA) HSP 1 Score: 207 bits (527), Expect = 9.430e-60 Identity = 93/163 (57.06%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGEVCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVPPS 1104 FE+F EDFKFS++HFVA+DGFRERLHGHNY ++R++GEV DGYV+D V++V R+LCKELNERFLCP S+ + ++ QV++ CQDG F P DCALLP++HSTAEELAH+L+ RL+ +F+ +YL RGV +++ V+E PRQEA YR +P S Sbjct: 29 FEIFAGNEDFKFSAAHFVAYDGFRERLHGHNYQVAVRMKGEVAHDGYVMDVEEVRRVTRRLCKELNERFLCPQRSNVINSKISDGQVLMKCQDGCLFSFPESDCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRLRGVRTLEICVSEAPRQEAVYRQPIPSS 191
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A7R9UEV5_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEV5_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.930e-59 Identity = 96/173 (55.49%), Postives = 133/173 (76.88%), Query Frame = 1 Query: 601 VSPERFEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGE-VCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVPPSEDKI 1116 V P F+V+VAK+DFKF +HFV F GFRER+HGHNY+ + L+G + DGYVVDFG +KKV R+LCKELNERF+CPM SD +E+ L QVV+ C+DGA F LPR DCA+LPLVHSTAEE++ F + L++EF++++L +RGVT ++++V+E Q+A YR VP ++++ Sbjct: 54 VDPGTFDVYVAKQDFKFHCAHFVTFSGFRERMHGHNYNVGVALKGSHLGPDGYVVDFGDIKKVTRRLCKELNERFICPMYSDVMEVELGEDQVVLRCEDGAYFSLPRGDCAVLPLVHSTAEEISRFFWCNLVQEFTIEWLKARGVTAVEITVSEAASQQAVYRRAVPEDDEEL 226
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A835ZGK8_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK8_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.330e-56 Identity = 90/156 (57.69%), Postives = 123/156 (78.85%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGE--VCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEA 1077 FEV V KEDFKFS++HFVA+DGFRER+HGHNY ++R++GE V DGYV+DFG +K++ R+LC EL++RFL P S+ + +T QV++ CQDG+ F +P DCALLP++HSTAEELAH+L+ RL+ +F+ +YL RGV M+++VAE PRQEA Sbjct: 1 FEVVVGKEDFKFSAAHFVAYDGFRERMHGHNYQVAVRMKGEYQVAHDGYVIDFGDIKRMTRRLCAELDQRFLYPQRSNVINSKVTDGQVMMKCQDGSLFTMPEADCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRMRGVRTMEITVAEGPRQEA 156
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: W7TPC8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC8_9STRA) HSP 1 Score: 189 bits (480), Expect = 7.300e-53 Identity = 98/189 (51.85%), Postives = 127/189 (67.20%), Query Frame = 1 Query: 634 KEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRG-EVCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATY--RGIVPPSEDKIQDPPFRSAK--RVQACFGRNDENDG 1185 KEDFKF +HFVAF G+RERLHGHNY+ +R+RG DGY++DFG +K V R LCKELNERFLCP SD ++I + G ++ + C+DGA FVLP DCA+LP+VHSTAEELA + + RL FS+ L SRG+ + + VAE PRQE Y R PP + R+A+ + + C GRN+ DG Sbjct: 2 KEDFKFHCAHFVAFKGYRERLHGHNYTVGVRMRGTRRGHDGYLIDFGDIKLVTRALCKELNERFLCPTRSDVIQIDVEGPRISLACEDGALFVLPTADCAMLPVVHSTAEELAQYFWHRLTTSFSVDRLLSRGIHTLQIMVAEAPRQEGCYTRRLTSPPLSFLDEGLGGRAAEVLKPKPCIGRNEVGDG 190
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A1Z5JDR4_FISSO (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDR4_FISSO) HSP 1 Score: 183 bits (465), Expect = 3.570e-51 Identity = 87/166 (52.41%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGE--VCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITL---TGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVP 1098 FEV+V+K+ FKF+++HFVAF G+RERLHGHNY +RL G + DGYV+D+G +K V + +CKELNE FLCPM SD L+I T T + I CQDG++F P+ DCA+LP+VH+T EE+A +L++ +L+ + QYL RG+ M+V+VAE P Q+AT+R +P Sbjct: 12 FEVYVSKDTFKFNAAHFVAFQGYRERLHGHNYQVGVRLLGRRTLGADGYVIDYGNIKAVCKTVCKELNEHFLCPMYSDVLKIESDDNTSTNIRITCQDGSSFSFPKQDCAMLPIVHATTEEIAIYLWSEILKGLNSQYLAQRGIHTMEVTVAEAPGQQATFRWEIP 177
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A8J2S4H7_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4H7_9STRA) HSP 1 Score: 184 bits (466), Expect = 6.340e-51 Identity = 91/164 (55.49%), Postives = 121/164 (73.78%), Query Frame = 1 Query: 595 AGVSPERFEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGEVCE-DGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATY 1083 AG + ++EV V E FKF+++HFVAF G+RERLHGHNY+CS+R+ G + E DGYV+DFG VKK R++C++LNERFLCP +DAL IT V IVC+D + F +P DCA+LPL HSTAEELA ++ R++ E ++ L RG+T ++VSVAE P QEA Y Sbjct: 12 AGWAAPKYEVQVKSERFKFNAAHFVAFPGYRERLHGHNYTCSVRVFGPLSEHDGYVLDFGDVKKATRRVCEQLNERFLCPCLADALAITRNKKNVEIVCEDASFFSMPEADCAMLPLKHSTAEELAALVWRRVIDELGVEKLVKRGITALEVSVAEAPSQEARY 175
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A448ZDB1_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDB1_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.800e-50 Identity = 92/200 (46.00%), Postives = 137/200 (68.50%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRG--EVCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITLTGTQ------VVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVPPSED----KIQDPPFRSAKRVQA----CFGR 1167 FEV+V K DFKF+++HFVAF GFRERLHGHNY+ +RL G ++C DGYV+DFG VKKV++ +CK+LNERFLCP +SD ++ + T+ VV+ C+DG+ FV+P DDCA++P+VH+T EELA + + +L + L RG+ M+V +AE P QEA +R +P +++ ++ P F ++ ++ CFG+ Sbjct: 17 FEVYVNKADFKFNAAHFVAFQGFRERLHGHNYTVGVRLLGSRKICHDGYVLDFGDVKKVVKAVCKKLNERFLCPTKSDVIDTQIVDTENDGRKSVVLTCEDGSRFVIPLDDCAMIPIVHATVEELAIYTWGEILDGLDPELLRRRGIHTMEVVMAEAPGQEAVFRLEIPETKNGEKFRLDVPSFINSGEIELKPKPCFGQ 216
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A1Z5K4V3_FISSO (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4V3_FISSO) HSP 1 Score: 181 bits (459), Expect = 2.320e-49 Identity = 87/166 (52.41%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRGE--VCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITL---TGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEATYRGIVP 1098 FEV+V+K+ FKF+++HFVAF G+RERLHGHNY +RL G + DGYV+DFG +K V + +CK+LNE FLCPM SD L+I T T + I CQDG++F P DCA+LP+VH+T EE+A +L++ +L+ + QYL RG+ M+V+VAE P Q+AT+R +P Sbjct: 10 FEVYVSKDTFKFNAAHFVAFQGYRERLHGHNYQVGVRLLGRRTLGADGYVIDFGNIKAVCKTVCKKLNEHFLCPMYSDVLKIESDDNTNTNIRITCQDGSSFSFPPQDCAMLPIVHATTEEIAIYLWSEILKGLNSQYLVQRGIHTMEVTVAEAPGQQATFRWEIP 175
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Match: A0A1E7F6Q8_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6Q8_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.200e-48 Identity = 86/174 (49.43%), Postives = 122/174 (70.11%), Query Frame = 1 Query: 616 FEVFVAKEDFKFSSSHFVAFDGFRERLHGHNYSCSIRLRG--EVCEDGYVVDFGVVKKVMRKLCKELNERFLCPMESDALEITL------------------TGTQVVIVCQDGATFVLPRDDCALLPLVHSTAEELAHFLFTRLLREFSLQYLHSRGVTDMDVSVAELPRQEA 1077 FEV+V+K DFKF+++HFVAF GFRERLHGHNY+ +RL G ++ DGYV+DFG VK V++K+CK+LNERFLCP++SD ++I + + V++ C+DGA FV+PRDDCA+LP+VH+T EELA ++++ +L + L RG+ M+V +AE P QEA Sbjct: 4 FEVYVSKADFKFNAAHFVAFRGFRERLHGHNYTVGVRLLGSRKISHDGYVMDFGDVKAVVKKVCKKLNERFLCPIKSDVIDIQIVQQDDVVVGNNSNKSNDCSSKSVILTCEDGAKFVMPRDDCAMLPIVHATVEELAIYVWSEILIGLDSKILRQRGIHTMEVVMAEAPGQEA 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig812.17112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig812.17112.1 >prot_L-elsbetiae_contig812.17112.1 ID=prot_L-elsbetiae_contig812.17112.1|Name=mRNA_L-elsbetiae_contig812.17112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=486bp MADLMVLDKASGRLVRKTTYGFENKVVGAAEGGGGGGGGGDEDGGGGGDSback to top mRNA from alignment at L-elsbetiae_contig812:7920..16952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig812.17112.1 ID=mRNA_L-elsbetiae_contig812.17112.1|Name=mRNA_L-elsbetiae_contig812.17112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9033bp|location=Sequence derived from alignment at L-elsbetiae_contig812:7920..16952- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig812:7920..16952- >mRNA_L-elsbetiae_contig812.17112.1 ID=mRNA_L-elsbetiae_contig812.17112.1|Name=mRNA_L-elsbetiae_contig812.17112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2916bp|location=Sequence derived from alignment at L-elsbetiae_contig812:7920..16952- (Laminarionema elsbetiae ELsaHSoW15)back to top |