mRNA_L-elsbetiae_contig8112.17105.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8112.17105.1
Unique NamemRNA_L-elsbetiae_contig8112.17105.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 5.970e-173
Identity = 239/272 (87.87%), Postives = 252/272 (92.65%), Query Frame = 1
Query:   10 NSEQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQGDVKSNLSVTRLSDMGSDIELDAAAHAFEDDAEGAGEGEDAGAGDE-DGEYPTSLIA 822
            +S+QVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDT + GDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVID+EDRWAPELNDVEDVERLLPGVV AIREWFRTYKVPDGKPENKFALDERCMGR YAMKVVSECH+AWRNLVGKAE G+VKSNLSV+RLSDMGSDIEL++A +A ED+A+G             +GEYPTSLIA
Sbjct:   49 HSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNLVGKAELGEVKSNLSVSRLSDMGSDIELESATNALEDEADGXXXXXXXXXXXXXEGEYPTSLIA 320          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA)

HSP 1 Score: 388 bits (997), Expect = 1.310e-133
Identity = 195/277 (70.40%), Postives = 220/277 (79.42%), Query Frame = 1
Query:    1 MKHNSEQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQG-DVKSNLSVTRLSDMGSDIELDAAAHAFED-DAEGAGEGEDAGAGDEDGEYPTSLIA 822
            M+ +  +VIS WHDIPLYV DE + K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDPEH HPDTG  GDNDPLDVCEIG+RIV TGDVRQVKVLGVLAMID+ ETDWKVI ID +DRWAPELNDVEDVERLLPGVV +IREWFRTYK+PDGKP N F L ERCM R YAMKV++EC++AW+ LV  A  G +V  NLSV++L+D+ +++E D    A +  +A   GE ED         YP SLIA
Sbjct:   28 MEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAED---------YPASLIA 295          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA)

HSP 1 Score: 348 bits (894), Expect = 3.870e-117
Identity = 163/228 (71.49%), Postives = 187/228 (82.02%), Query Frame = 1
Query:   16 EQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQGDVKSNLSVTRLSDM 699
            ++V+S+WHD+PLY  DE    TG LNFVCEIPRCSRKK+EIAT+E GNPIKQD KKG LR FKKGDIFFNYGCFPRTWEDP+ VHPD G  GDNDPLDVCEIG+RIV T +VRQVK+LGVL +ID+ E DWK+I ID+ DRWAPELND++DVERLLPGV+  IREWFRTYKVPDGKPEN F L+ERCM + YAM VV+ECH AW+ LV   +Q   K NLSV  L D+
Sbjct:   91 KRVLSLWHDLPLYCTDEYGLRTGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKKGDIFFNYGCFPRTWEDPDFVHPDVGVGGDNDPLDVCEIGIRIVPTAEVRQVKILGVLCLIDDGEADWKIIAIDETDRWAPELNDMDDVERLLPGVIGTIREWFRTYKVPDGKPENVFGLEERCMPKEYAMHVVAECHQAWKGLV--TQQKPAK-NLSVVNLKDL 315          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA)

HSP 1 Score: 336 bits (862), Expect = 3.920e-111
Identity = 162/230 (70.43%), Postives = 183/230 (79.57%), Query Frame = 1
Query:   13 SEQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQGDVKSNLSVTRLSDM 699
            S + IS WHD+ L+ R+E +   TG LNFVCEIP+ SRKKFE+ATNE  NPIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP  VHPD G  GDNDPLDVCEIGL+IV TG VRQVKVLG L MID+ E DWKVIVID  DRWAP+LNDVEDVERLLPG VSA+REWFRTYK+PDGKP N+F L+ERCM R YAM++V E H AWR LV    Q     +L V  ++D+
Sbjct:  167 SNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKKGDIFFNYGCFPRTWEDPCFVHPDAGVGGDNDPLDVCEIGLQIVPTGAVRQVKVLGCLCMIDDGEADWKVIVIDVNDRWAPDLNDVEDVERLLPGTVSAVREWFRTYKIPDGKPPNRFGLNERCMPREYAMQIVGETHHAWRRLV----QHQTSEDLHVPPVADI 392          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A7S4E7X2_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X2_9STRA)

HSP 1 Score: 330 bits (847), Expect = 2.600e-110
Identity = 151/207 (72.95%), Postives = 169/207 (81.64%), Query Frame = 1
Query:   25 ISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGK 645
            +S+WHD+PL          G  NF+CEIP+C+RKKFE+AT E   PIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP HV PDTGY GDNDPLDVCEIGLR V TG++R VKVLGVLAMID+DETDWKV+ ID EDRWAPELND+ DVERL+PG VS IREWFRTYK+PDGKP NKFALDE+CMG  YA KV+ E H  W +LV K
Sbjct:   91 LSLWHDVPLVAEG------GLFNFICEIPKCTRKKFEVATTEGATPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQVQTGEIRPVKVLGVLAMIDDDETDWKVVAIDAEDRWAPELNDINDVERLIPGTVSLIREWFRTYKIPDGKPPNKFALDEKCMGAKYAHKVIHETHTFWCDLVQK 291          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: F0YGD1_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGD1_AURAN)

HSP 1 Score: 328 bits (840), Expect = 5.820e-109
Identity = 151/213 (70.89%), Postives = 173/213 (81.22%), Query Frame = 1
Query:    4 KHNSEQVISVWHDIPLYVRDEA-EKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLV 639
            +  S + +S+WHD+PL   D A E  T   NFVCEIP+C+RKKFE+ATNE   PIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP H  PDTGY GDNDPLDVCEIGLR V TG++R VKVLGVLAMID+DETDWKV+ ID EDRWA ELNDV+DVERLLPG V  IREWFRTYK+PDGKP NKFA +ERC+   YA+KV+ E H ++  L+
Sbjct:   88 RSGSTKELSLWHDVPLVAADGAPESSTPTFNFVCEIPKCTRKKFEVATNEHVTPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHTSPDTGYPGDNDPLDVCEIGLRQVRTGEIRAVKVLGVLAMIDDDETDWKVVAIDAEDRWASELNDVDDVERLLPGTVGLIREWFRTYKIPDGKPPNKFAFEERCLPAAYALKVIHETHESYLELI 300          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: F0Y2P4_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2P4_AURAN)

HSP 1 Score: 322 bits (826), Expect = 4.860e-107
Identity = 157/233 (67.38%), Postives = 176/233 (75.54%), Query Frame = 1
Query:   25 ISVWHDIPLYVRDEAEKCTGHL-NFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQGDVKSNL-SVTRLSDMGSDIEL 717
            +S+WHD+PL     + +  G L NF+CEIP+C+RKKFE+AT E   PIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP HV PDTGY GDNDPLDVCEIGLR + TG++R VKVLGVLAMID+DETDWK++ ID  DRWA ELNDV DVERLLPG VS IREWFRTYK+PDGKP NKFAL E C G  YA KV+ E H AW NLV      D    L  V  L D+  D  L
Sbjct:   92 LSLWHDVPLAAPGSSGR--GSLFNFICEIPKCTRKKFEVATTEGATPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQIQTGEIRAVKVLGVLAMIDDDETDWKIVAIDAADRWASELNDVGDVERLLPGTVSLIREWFRTYKIPDGKPPNKFALGEECKGAAYAHKVIHETHEAWVNLVKTQVGADFGFQLPKVETLRDVDVDTTL 322          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A7S4A2D5_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2D5_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.300e-106
Identity = 150/238 (63.03%), Postives = 177/238 (74.37%), Query Frame = 1
Query:   25 ISVWHDIPLYVRDEAEKCTGH-------LNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVGKAEQGDVKSNLSVTRLSDMGSDIEL 717
            +S+WHD+PL                    NFVCEIP+C+RKKFE+AT+E   PIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP HV  DTGY GDNDPLDVCEIG+R + TG VR VKVLGVLAMID+DETDWKV+ ID +DRWAPELNDVEDVERLLPG +S IREWFRTYK+PDGKP NKFAL+ERCM R YA  V+ + H A+R+L+       +     ++ L+ +  D E+
Sbjct:   82 LSLWHDVPLVAPSAPSSAPASPRNAPPLFNFVCEIPKCTRKKFEVATDETKCPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSKDTGYPGDNDPLDVCEIGIRQIGTGQVRAVKVLGVLAMIDDDETDWKVVAIDVDDRWAPELNDVEDVERLLPGTISFIREWFRTYKIPDGKPPNKFALEERCMPRAYAHGVIRDTHAAYRDLLASGGHEGLHLPADISSLTGLARDSEI 319          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: A0A7S3L5X3_9STRA (Inorganic diphosphatase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5X3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 1.300e-104
Identity = 149/240 (62.08%), Postives = 186/240 (77.50%), Query Frame = 1
Query:   25 ISVWHDIPL-YVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLV-GKAEQG---------DVKSNLSVTRLSDMGSDI 711
            IS+WHD+ L ++  + ++ T +LNFVCEIP+ +RKK+EIAT+EVGNPIKQDTKKG LREFKKGD++FNYGCFP+TWEDP HVHPD G +GDNDPLDV EIG RIV  GD+R VKVLGV+ MIDE E DWKV+ ID  D+WAP LND++DVER +PG++SAIREW+RTYK+PDGKP N FALDE+ M + YAMKV+ ECH +W  L+ G+ E+G         D+  NLS   L  +  D+
Sbjct:   54 ISLWHDVSLVHIDPQTKQETPYLNFVCEIPKFTRKKYEIATDEVGNPIKQDTKKGQLREFKKGDLYFNYGCFPQTWEDPTHVHPDAGARGDNDPLDVVEIGARIVKPGDIRPVKVLGVICMIDEGECDWKVVTIDANDKWAPFLNDIDDVEREMPGMLSAIREWYRTYKIPDGKPPNVFALDEKFMDKAYAMKVIEECHHSWELLISGEKERGLDDHGDEVKDLVRNLSRNSLFTLAMDL 293          
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Match: W7TI24_9STRA (Inorganic diphosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI24_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.030e-104
Identity = 154/251 (61.35%), Postives = 183/251 (72.91%), Query Frame = 1
Query:    1 MKHNSEQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMKVVSECHIAWRNLVG-----------KAEQGDVKSNLSVTRLSDMGSDIELD 720
            + HN E+ IS+WH++PL+  D+  K TG LNF+CEIP+ +R+KFEI T E GNPIKQD K G  R F KGDIFFNYGCFPRTWEDP+HV  D G  GDNDPLDVCEIGLR + TG VRQVKVLGVL +ID+ E DWKVI ID+EDRWA ELNDV+DVERLLPG + A+REWFRTYK+PDGKPEN+FAL E  MG  Y M+V+ E H AW+ LV            +A    +  NLSV  L ++  DI+ D
Sbjct:   31 LDHNQER-ISLWHELPLFAVDDDAKPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDQKNGKPRVFSKGDIFFNYGCFPRTWEDPQHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWARELNDVQDVERLLPGTLDAVREWFRTYKIPDGKPENRFALGEEFMGVKYTMRVIRETHEAWKRLVKSSGGWRGDLSREASSQSLHRNLSVPSLEEL--DIDSD 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8112.17105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB9_ECTSI5.970e-17387.87Inorganic diphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A835YXT5_9STRA1.310e-13370.40Inorganic diphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V803_9STRA3.870e-11771.49Inorganic diphosphatase n=1 Tax=Fibrocapsa japonic... [more]
A0A6U4FME2_9STRA3.920e-11170.43Inorganic diphosphatase n=1 Tax=Phaeomonas parva T... [more]
A0A7S4E7X2_9STRA2.600e-11072.95Inorganic diphosphatase n=1 Tax=Pelagomonas calceo... [more]
F0YGD1_AURAN5.820e-10970.89Inorganic diphosphatase n=1 Tax=Aureococcus anopha... [more]
F0Y2P4_AURAN4.860e-10767.38Inorganic diphosphatase n=1 Tax=Aureococcus anopha... [more]
A0A7S4A2D5_9STRA1.300e-10663.03Inorganic diphosphatase n=1 Tax=Pelagomonas calceo... [more]
A0A7S3L5X3_9STRA1.300e-10462.08Inorganic diphosphatase n=1 Tax=Amphora coffeiform... [more]
W7TI24_9STRA2.030e-10461.35Inorganic diphosphatase n=1 Tax=Nannochloropsis ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8112contigL-elsbetiae_contig8112:4822..8962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.0
Seed ortholog evalue8.8e-137
Seed eggNOG ortholog2880.D8LCB9
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
EggNOG free text desc.inorganic diphosphatase activity
EggNOG OGsCOG0221@1,KOG1626@2759
EC3.6.1.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptioninorganic pyrophosphatase
Ec32 orthologEc-14_005330.1
Exons4
Model size825
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8112.17105.1prot_L-elsbetiae_contig8112.17105.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8112 4822..8962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.0080693-CDS-L-elsbetiae_contig8112:4821..51251622816896.0080693-CDS-L-elsbetiae_contig8112:4821..5125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 4822..5125 -
1691683894.701945-CDS-L-elsbetiae_contig8112:4821..51251691683894.701945-CDS-L-elsbetiae_contig8112:4821..5125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 4822..5125 -
1622816896.0189645-CDS-L-elsbetiae_contig8112:5957..60841622816896.0189645-CDS-L-elsbetiae_contig8112:5957..6084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 5958..6084 -
1691683894.722054-CDS-L-elsbetiae_contig8112:5957..60841691683894.722054-CDS-L-elsbetiae_contig8112:5957..6084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 5958..6084 -
1622816896.0352168-CDS-L-elsbetiae_contig8112:6862..70491622816896.0352168-CDS-L-elsbetiae_contig8112:6862..7049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 6863..7049 -
1691683894.7317924-CDS-L-elsbetiae_contig8112:6862..70491691683894.7317924-CDS-L-elsbetiae_contig8112:6862..7049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 6863..7049 -
1622816896.048961-CDS-L-elsbetiae_contig8112:8755..89621622816896.048961-CDS-L-elsbetiae_contig8112:8755..8962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 8756..8962 -
1691683894.7411633-CDS-L-elsbetiae_contig8112:8755..89621691683894.7411633-CDS-L-elsbetiae_contig8112:8755..8962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8112 8756..8962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8112.17105.1

>prot_L-elsbetiae_contig8112.17105.1 ID=prot_L-elsbetiae_contig8112.17105.1|Name=mRNA_L-elsbetiae_contig8112.17105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=275bp
MKHNSEQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNE
VGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDND
PLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDKEDRWAPE
LNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALDERCMGRPYAMK
VVSECHIAWRNLVGKAEQGDVKSNLSVTRLSDMGSDIELDAAAHAFEDDA
EGAGEGEDAGAGDEDGEYPTSLIA*
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mRNA from alignment at L-elsbetiae_contig8112:4822..8962-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8112.17105.1 ID=mRNA_L-elsbetiae_contig8112.17105.1|Name=mRNA_L-elsbetiae_contig8112.17105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4141bp|location=Sequence derived from alignment at L-elsbetiae_contig8112:4822..8962- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAACACAACAGTGAGCAGGTGATCTCCGTGTGGCACGACATCCCCCT CTACGTCCGCGACGAGGCGGAGAAGTGCACCGGGCACCTCAACTTCGTGT GCGAGATCCCTCGCTGCTCCCGCAAGAAGTTCGAGATTGCGACCAACGAG GTCGGAAACCCAATCAAGCAGGACACCAAGAAGGGTCTGCTCCGAGAATT CAAGAAGGTATGTGTGTTGTATGTAACACATGTATGTTATCCGTGTTTAC GTACGCATTTCAAACACAGGCCGTGTTGAGTTTTTAGCACCCCCCCCCCC CCCCCCACCCATGTATTGAACCCCGTCGTAGCAAGGTAGATGGATGAGGC CCCGCTTTGTCTCCGAACACACACCTGTAAGTTTAAGCGTCGCGACAGAT ACCATTTGAACGAGACAATACAGAAGGGTGCACGCAACACGCGCGGCCTC ATAAATTAGACCCGAAAACAGGGGGAGGGAGGGGGGGGGGGGGGGGCGGG GGAGTTGGGGGTTTTTGGGTGGGTGGGGGGGGTGTAGGGAGGGAACGGGG AGAGGAGGGAAAAAGGGAAGANNNNNNNNNNCATTTAGACGAAAAAAAAA AAAAGGGGGGCCGCAAACCCGGGGGCCCCAAAAAATAAGCCCCAAAAAGG GGGGGGGGGGGGGGGGGGGGGGGGGGGCGAACGCTTTGTGACTTTGTGTC TTTGAGGAGGCTGTGTAGGAAGTCAACGACAAGACGAGAGAAAACGAAAG ACGCGCCGATGAAGAGGAGAGAGGAAAGCCCACGGGCTGAAAAGAGAAAA TCCAGAGCGTTCTGTCGCACCTTACATACAAGGACGACGAGTGTGGCACG TGCTGTCCTTCTATTTATGTGTTGCCAGTAGCACAAACAAACACGTGGTA CTTCGTATGGATGTACCGGTATACCCCAGAATGTAGTAAGCGCCTGTTGG CGGAGGGGCGCCAGTCCTCCTTGGTTTTGTTTGTTCCTGCCCGATACTGC ATAACGGATAAGATCTATATCTCGAAGCTCGGCAGGGCACCCCAACTCAA CCCGAGCATGCCGCCTCCGAAATATTTTTTCGTCAAGCGATAAATATTTT CCTGGGTCGCACACACACCCAACCCTCCTTTGCCAGTGGCACCCTCTCTC CCCTTTATGTCGAGGGAAGTTGTTTCGATGTTTTGAACGAAGCGTTTTTT TTTATATATGTATGTATATATTTACTTACATATACAAATTGATCTCTGGG AACTTCTGTTCCGAAATCTGAATCAGTAGGCTATCGGCCTCCAACAGCCC GAAAAAACGTCAGTGTGAAGCAGCTGTTTTGAGCATGGCTGTACGTGCCA GGAGACTGGACAGCTATTGTACCTGATGAGCACAGACCGGCACAGCTCTG TTTGGTTCAAGGGAGGAAGCGGCAGCACAGAAAATAAGCAGTTGTTCGTT TGTTTCAGTATGCACAGCAGCTGCTGCTTCGGTGCTCAAAACACAGCAGC AGCAGCAGCAGCAGCTGCTGCTGCTGATGTTTTTTTCAGTTGTAAATTTA GGAGTACTTCTGCTGCCTTCGCCTGTTTGCTTTGGTCTTGCATCACCCCC TGCCGCTGTCTCTCATGAGCTCGCTCCGAATTTTGATCTTGTAAATACTC CCTACATATTAGCAGTGCTTCCGACGGAGTCACTTTTTTCACTTGACGAG GAACCCGCCTGACTTTTGCAGAACCACGAAAAATGCCGTGTGCGTGTGTG TGGGTGTGCGCCTGTGTATGTTGGTTGCGTTTTTTTTGTTTTTTTTGTTT CTTGGCCCCTTGCCTCGTGTTCTGGTTCTCACCCTCCCGCCACAAAAAAA ACGAAGCACAAAACACACATATGCAAATGTGTATTGTACCTAAATGATAC ATGTGTACCCCAGGGTGACATCTTTTTCAACTACGGGTGCTTCCCGAGAA CATGGGAGGACCCCGAGCACGTGCACCCCGACACGGGCTACCAGGGCGAC AACGACCCGCTCGACGTGTGCGAGATCGGGCTGCGCATCGTGGCCACCGG GGACGTGCGGCAGGTCAAGGTGCTCGGGGTGCTGGCCATGATCGACGAAG GTGAGGCGCGGGCCAGGCAGGCAGTAGTTGGGGGGGGGGGGGGGGGGGGA AAAAAGAAACTCAAGGTTTGGGGGTAATCTAGGGTCCTCATCGGAAGAAC GAAGAGGCGAGGGCCGCAAAATACGAGANNNNNNNNNNGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGAAGAACGAAACTCAAGGTTTGGAGGTAATCTAGTGTCCTCATCGGA AGAACGAAGAGTCGAGGGCCGCTAAATACGACTGCTGTGCTGCACCGCGA AAGCAGGAAGGTTTTGTGGAGACCTGTATTGTGCCATAGATTTTTGTGGT GGTGGTGGTGGTGAGATGAAAAAGAGGAAGAAAAGCTATCCCCGCTGACA TCGAGTCTCTCCTCGTTCCGCTTTGCACAGTGAGAAGTATGCATCTAGAC GAAGGGATTGAGATTGCGTATGCGCGTGCCGCTTGCCCGTGCCAAGTGTT TCACACCCCCGTCCCCCGCTTCCGCCGCCACAGCCGCCTCTGCTGCTCAG AATTTTGCGCTTAAAATAGAAACACCCGCGCCCGCTTGGTTTGTGTGTTG TGTTGTTTTTCCGCTCTGGTCTGGCATCTCTGCCCTGCCTATCTCTGCAT CTCTGCGTTGCCTTTGCCTTTGCCTTTCGCCTCGCTCTCGCCTGGCTTGG CTTGGCTTGGCTTGGCTTGGCTGCGTAGACGAGACGGACTGGAAGGTGAT CGTGATCGACAAGGAGGACCGATGGGCGCCGGAGCTCAACGACGTGGAGG ACGTTGAGCGCCTGCTGCCCGGCGTGGTGTCGGCCATTCGCGAGTGGTTC CGCACGTGAGTCAACAACCCCGGAGCCTCTTGTTCCTTCTCGTGCATAAA TAATACTACATACATACATACATATGTGATGGCGTGTGCTCAATATCGGC GTCCATTCGTGAGTTCGAATCTCAGCGGAAGCGACGTTTTCTTGCGAAGT GAGTTTTTTCTCCCGCTTCCGTCCTTGTCAGTGGATAGCGCTCAGCGTGT GTACACAAACGTCGAACTCACCGTCGACGAGGGAAAGGGACGGCTGAACC CTTTTCGCGACAAAAATCTTAGGCAAGCACCGCAGACGGGGGGAGTGAGG GGAGGGCCTTGGGGAAAGGAACCCTTCGGTGTGATCACGGTTCAGTACTC TGACAAGATGTCCTCGTGACAGGGAGCCAGCCCATCGAGCACTGGAAATA ATTGTGAAATGAATAAAAAAATCGGAATCGATTATACACTTTTCCATTTG GACCGGGTTTTTGTTTCTCCTCCGCAAAAGTAGACAGAGGCAGATAGAGG TAAGCGATGTGAATGAGAATTTTTTGCTTATTTAGCAGCGTAAAAAAGTC GCGGGCGTATCAAGTTCTCGGTGTAGAAGGGGGGTGGGGCTGCTTGTTTT TTACGTTTCCACACCGTTTCCACACACATTGCCTTCCGTCGAACTAAACT CCTAATTAAACTTGTAATTTAATTTTTTGTTAAAAAATGACGTTTCGTGG TGAGTAATTGTTTCCCTCCCCCCCCCCCCGTGCGCCTTGTTCTTTATTCG CTGTTGTCTCTCTCCGTTCCTCTCTGTTGTTGTTGTTGTTGTTGTGTTGT TGTTGTTGTTGTTGCTCTGGTCTGTTGCTTTGCGCAGTTACAAGGTCCCC GACGGCAAGCCCGAGAACAAGTTCGCGCTGGACGAGCGGTGCATGGGCCG GCCGTACGCGATGAAGGTGGTGTCCGAGTGCCACATAGCGTGGCGCAACC TCGTGGGCAAGGCGGAGCAGGGCGACGTGAAGAGCAACCTCTCCGTGACG AGGCTGAGCGATATGGGCTCGGACATCGAGCTGGACGCCGCTGCGCACGC GTTCGAGGACGACGCGGAAGGGGCGGGGGAGGGGGAGGACGCGGGGGCAG GGGACGAGGACGGCGAGTACCCGACCTCTCTGATCGCGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8112:4822..8962-

>mRNA_L-elsbetiae_contig8112.17105.1 ID=mRNA_L-elsbetiae_contig8112.17105.1|Name=mRNA_L-elsbetiae_contig8112.17105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1650bp|location=Sequence derived from alignment at L-elsbetiae_contig8112:4822..8962- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAACACAACAGTGAGCAGGTGATCTCCGTGTGGCACGACATCCCCCT
CTACGTCCGCGACGAGGCGGAGAAGTGCACCGGGCACCTCAACTTCGTGT
GCGAGATCCCTCGCTGCTCCCGCAAGAAGTTCGAGATTGCGACCAACGAG
GTCGGAAACCCAATCAAGCAGGACACCAAGAAGGGTCTGCTCCGAGAATT
CAAGAAGATGAAACACAACAGTGAGCAGGTGATCTCCGTGTGGCACGACA
TCCCCCTCTACGTCCGCGACGAGGCGGAGAAGTGCACCGGGCACCTCAAC
TTCGTGTGCGAGATCCCTCGCTGCTCCCGCAAGAAGTTCGAGATTGCGAC
CAACGAGGTCGGAAACCCAATCAAGCAGGACACCAAGAAGGGTCTGCTCC
GAGAATTCAAGAAGGGTGACATCTTTTTCAACTACGGGTGCTTCCCGAGA
ACATGGGAGGACCCCGAGCACGTGCACCCCGACACGGGCTACCAGGGCGA
CAACGACCCGCTCGACGTGTGCGAGATCGGGCTGCGCATCGTGGCCACCG
GGGACGTGCGGCAGGTCAAGGTGCTCGGGGTGCTGGCCATGATCGACGAA
GGGTGACATCTTTTTCAACTACGGGTGCTTCCCGAGAACATGGGAGGACC
CCGAGCACGTGCACCCCGACACGGGCTACCAGGGCGACAACGACCCGCTC
GACGTGTGCGAGATCGGGCTGCGCATCGTGGCCACCGGGGACGTGCGGCA
GGTCAAGGTGCTCGGGGTGCTGGCCATGATCGACGAAGACGAGACGGACT
GGAAGGTGATCGTGATCGACAAGGAGGACCGATGGGCGCCGGAGCTCAAC
GACGTGGAGGACGTTGAGCGCCTGCTGCCCGGCGTGGTGTCGGCCATTCG
CGAGTGGTTCCGCACACGAGACGGACTGGAAGGTGATCGTGATCGACAAG
GAGGACCGATGGGCGCCGGAGCTCAACGACGTGGAGGACGTTGAGCGCCT
GCTGCCCGGCGTGGTGTCGGCCATTCGCGAGTGGTTCCGCACTTACAAGG
TCCCCGACGGCAAGCCCGAGAACAAGTTCGCGCTGGACGAGCGGTGCATG
GGCCGGCCGTACGCGATGAAGGTGGTGTCCGAGTGCCACATAGCGTGGCG
CAACCTCGTGGGCAAGGCGGAGCAGGGCGACGTGAAGAGCAACCTCTCCG
TGACGAGGCTGAGCGATATGGGCTCGGACATCGAGCTGGACGCCGCTGCG
CACGCGTTCGAGGACGACGCGGAAGGGGCGGGGGAGGGGGAGGACGCGGG
GGCAGGGGACGAGGACGGCGAGTACCCGACCTCTCTGATCGCGTGATTAC
AAGGTCCCCGACGGCAAGCCCGAGAACAAGTTCGCGCTGGACGAGCGGTG
CATGGGCCGGCCGTACGCGATGAAGGTGGTGTCCGAGTGCCACATAGCGT
GGCGCAACCTCGTGGGCAAGGCGGAGCAGGGCGACGTGAAGAGCAACCTC
TCCGTGACGAGGCTGAGCGATATGGGCTCGGACATCGAGCTGGACGCCGC
TGCGCACGCGTTCGAGGACGACGCGGAAGGGGCGGGGGAGGGGGAGGACG
CGGGGGCAGGGGACGAGGACGGCGAGTACCCGACCTCTCTGATCGCGTGA
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