mRNA_L-elsbetiae_contig811.17101.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig811.17101.1
Unique NamemRNA_L-elsbetiae_contig811.17101.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig811.17101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig811contigL-elsbetiae_contig811:714..1796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size977
Cds size975
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816895.7268922-CDS-L-elsbetiae_contig811:713..15731622816895.7268922-CDS-L-elsbetiae_contig811:713..1573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig811 714..1573 +
1691683894.5034065-CDS-L-elsbetiae_contig811:713..15731691683894.5034065-CDS-L-elsbetiae_contig811:713..1573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig811 714..1573 +
1622816895.7398534-CDS-L-elsbetiae_contig811:1681..17961622816895.7398534-CDS-L-elsbetiae_contig811:1681..1796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig811 1682..1796 +
1691683894.5137267-CDS-L-elsbetiae_contig811:1681..17961691683894.5137267-CDS-L-elsbetiae_contig811:1681..1796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig811 1682..1796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig811.17101.1prot_L-elsbetiae_contig811.17101.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig811 714..1796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig811.17101.1

>prot_L-elsbetiae_contig811.17101.1 ID=prot_L-elsbetiae_contig811.17101.1|Name=mRNA_L-elsbetiae_contig811.17101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp
SHTPTLLPSLSAPIWKMPRGRCGHEDCMKMATYGDKERKTREYCAKHALD
GMINVVNKACRNPDCAKIPTFGVPGTKITQFCLQHAEEGMVDVLNRKCGH
PACSKVPSYGVEGTKTGLFCSNHAEDGMVNVVSRRCADDACKKLASFSVR
GTKKGEFCAAHAKTGMVNVHDKICLEAGCSKQCNFGVEGTTKVLYCSEHA
KEGMVNVRSKKCGHPLCTTKASFGVAGSRVFEYCRQHARDGMTNVRFRSC
CHPGCIKRPYYNKVGVRRPEYCDDHAAEGMINFNQKRRKALGKRAGGAVG
GGGRAIKRPRHPGDVPPLLAPVKEE
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mRNA from alignment at L-elsbetiae_contig811:714..1796+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig811.17101.1 ID=mRNA_L-elsbetiae_contig811.17101.1|Name=mRNA_L-elsbetiae_contig811.17101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1083bp|location=Sequence derived from alignment at L-elsbetiae_contig811:714..1796+ (Laminarionema elsbetiae ELsaHSoW15)
TCTCACACCCCCACTCTCCTTCCTTCCCTCTCTGCTCCAATTTGGAAGAT
GCCCCGCGGGCGATGCGGTCACGAGGATTGCATGAAGATGGCAACCTACG
GCGACAAGGAAAGAAAAACCCGGGAGTACTGCGCCAAGCACGCCCTCGAT
GGAATGATAAACGTCGTCAACAAGGCTTGCAGAAACCCTGACTGCGCCAA
GATACCAACGTTCGGCGTCCCGGGCACGAAAATCACCCAGTTCTGCCTCC
AGCACGCCGAGGAGGGAATGGTGGACGTCCTCAACAGGAAGTGCGGGCAC
CCTGCTTGTTCCAAGGTGCCATCGTATGGCGTAGAAGGCACCAAAACGGG
GCTGTTCTGCTCAAACCACGCTGAAGACGGCATGGTTAACGTTGTGAGCA
GGAGGTGCGCCGACGACGCCTGCAAGAAACTGGCTTCGTTCAGCGTTCGC
GGTACCAAAAAGGGCGAGTTCTGTGCCGCCCACGCCAAGACCGGAATGGT
CAACGTCCACGACAAAATCTGCCTCGAAGCAGGGTGCAGCAAGCAGTGCA
ACTTCGGAGTGGAAGGCACCACAAAGGTTTTGTACTGCAGCGAGCACGCG
AAGGAGGGGATGGTGAACGTGCGCAGCAAGAAATGCGGCCATCCCCTTTG
CACCACCAAAGCGTCATTCGGCGTTGCCGGCTCGAGAGTATTCGAGTACT
GCCGACAGCACGCACGGGACGGAATGACGAACGTGCGCTTCCGGAGCTGC
TGCCACCCCGGCTGCATCAAAAGGCCATACTACAACAAGGTGGGGGTGCG
AAGGCCGGAGTACTGCGATGATCACGCCGCGGAGGGAATGATCAACTTCA
ACCAAAAGAGGTGTGGCGCCAAGAGCTGCGCACAAATCGCGTCGCACGGC
GTGCAAGGGACGAAGACGGCGGGGTTCTGCAGCGAGCACGCGGAACAGGG
GATGGTGAATGTTTTGAGGAGGAAGGCGCTCGGCAAGCGCGCGGGCGGTG
CCGTTGGCGGCGGCGGCAGGGCCATCAAGCGACCCCGTCACCCCGGCGAT
GTCCCGCCGCTGCTGGCGCCGGTGAAAGAAGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig811:714..1796+

>mRNA_L-elsbetiae_contig811.17101.1 ID=mRNA_L-elsbetiae_contig811.17101.1|Name=mRNA_L-elsbetiae_contig811.17101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig811:714..1796+ (Laminarionema elsbetiae ELsaHSoW15)
TCTCACACCCCCACTCTCCTTCCTTCCCTCTCTGCTCCAATTTGGAAGAT
GCCCCGCGGGCGATGCGGTCACGAGGATTGCATGAAGATGGCAACCTACG
GCGACAAGGAAAGAAAAACCCGGGAGTACTGCGCCAAGCACGCCCTCGAT
GGAATGATAAACGTCGTCAACAAGGCTTGCAGAAACCCTGACTGCGCCAA
GATACCAACGTTCGGCGTCCCGGGCACGAAAATCACCCAGTTCTGCCTCC
AGCACGCCGAGGAGGGAATGGTGGACGTCCTCAACAGGAAGTGCGGGCAC
CCTGCTTGTTCCAAGGTGCCATCGTATGGCGTAGAAGGCACCAAAACGGG
GCTGTTCTGCTCAAACCACGCTGAAGACGGCATGGTTAACGTTGTGAGCA
GGAGGTGCGCCGACGACGCCTGCAAGAAACTGGCTTCGTTCAGCGTTCGC
GGTACCAAAAAGGGCGAGTTCTGTGCCGCCCACGCCAAGACCGGAATGGT
CAACGTCCACGACAAAATCTGCCTCGAAGCAGGGTGCAGCAAGCAGTGCA
ACTTCGGAGTGGAAGGCACCACAAAGGTTTTGTACTGCAGCGAGCACGCG
AAGGAGGGGATGGTGAACGTGCGCAGCAAGAAATGCGGCCATCCCCTTTG
CACCACCAAAGCGTCATTCGGCGTTGCCGGCTCGAGAGTATTCGAGTACT
GCCGACAGCACGCACGGGACGGAATGACGAACGTGCGCTTCCGGAGCTGC
TGCCACCCCGGCTGCATCAAAAGGCCATACTACAACAAGGTGGGGGTGCG
AAGGCCGGAGTACTGCGATGATCACGCCGCGGAGGGAATGATCAACTTCA
ACCAAAAGAGTCTCACACCCCCACTCTCCTTCCTTCCCTCTCTGCTCCAA
TTTGGAAGATGCCCCGCGGGCGATGCGGTCACGAGGATTGCATGAAGATG
GCAACCTACGGCGACAAGGAAAGAAAAACCCGGGAGTACTGCGCCAAGCA
CGCCCTCGATGGAATGATAAACGTCGTCAACAAGGCTTGCAGAAACCCTG
ACTGCGCCAAGATACCAACGTTCGGCGTCCCGGGCACGAAAATCACCCAG
TTCTGCCTCCAGCACGCCGAGGAGGGAATGGTGGACGTCCTCAACAGGAA
GTGCGGGCACCCTGCTTGTTCCAAGGTGCCATCGTATGGCGTAGAAGGCA
CCAAAACGGGGCTGTTCTGCTCAAACCACGCTGAAGACGGCATGGTTAAC
GTTGTGAGCAGGAGGTGCGCCGACGACGCCTGCAAGAAACTGGCTTCGTT
CAGCGTTCGCGGTACCAAAAAGGGCGAGTTCTGTGCCGCCCACGCCAAGA
CCGGAATGGTCAACGTCCACGACAAAATCTGCCTCGAAGCAGGGTGCAGC
AAGCAGTGCAACTTCGGAGTGGAAGGCACCACAAAGGTTTTGTACTGCAG
CGAGCACGCGAAGGAGGGGATGGTGAACGTGCGCAGCAAGAAATGCGGCC
ATCCCCTTTGCACCACCAAAGCGTCATTCGGCGTTGCCGGCTCGAGAGTA
TTCGAGTACTGCCGACAGCACGCACGGGACGGAATGACGAACGTGCGCTT
CCGGAGCTGCTGCCACCCCGGCTGCATCAAAAGGCCATACTACAACAAGG
TGGGGGTGCGAAGGCCGGAGTACTGCGATGATCACGCCGCGGAGGGAATG
ATCAACTTCAACCAAAAGAGGAGGAAGGCGCTCGGCAAGCGCGCGGGCGG
TGCCGTTGGCGGCGGCGGCAGGGCCATCAAGCGACCCCGTCACCCCGGCG
ATGTCCCGCCGCTGCTGGCGCCGGTGAAAGAAGAGGAGGAAGGCGCTCGG
CAAGCGCGCGGGCGGTGCCGTTGGCGGCGGCGGCAGGGCCATCAAGCGAC
CCCGTCACCCCGGCGATGTCCCGCCGCTGCTGGCGCCGGTGAAAGAAGAG
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