mRNA_L-elsbetiae_contig8106.17100.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: D7G209_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G209_ECTSI) HSP 1 Score: 348 bits (892), Expect = 6.200e-106 Identity = 181/222 (81.53%), Postives = 197/222 (88.74%), Query Frame = 3 Query: 1539 VDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRKR 2204 VDVY+G W SKARTIN+ELR AALSGMMVAG+ +WGQKNA+LLD+L++NQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELV DI+MVYDLV+DRGG ER+VAATADISGISM+KAEV QVAAKN+ARA LLK+Y SDSF + EVERVLDSIADANNYIAFNVAPVERTI LL+ NFHPD PEGEWSLKLSA S GRKR Sbjct: 234 VDVYSGRWS-SKARTINEELRMTLAALSGMMVAGELNWGQKNAALLDSLDDNQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVKDIQMVYDLVEDRGGLEMLQDERVVAATADISGISMSKAEVSFQVAAKNKARAGLLKDYVSDSFPKEEVERVLDSIADANNYIAFNVAPVERTISLLQDNFHPDKPEGEWSLKLSA-SGGRKR 453
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A6H5LC65_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC65_9PHAE) HSP 1 Score: 345 bits (885), Expect = 7.510e-105 Identity = 179/223 (80.27%), Postives = 196/223 (87.89%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRKR 2204 RVDVY+ W KARTIN+ELR AALSGMMVAG+R+WGQKNA+LLD+L++NQDAFA+IFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELV DI+MVYDLV+DRGG ER+V ATADISGISM+KAEV QVAAKN+ARA LLK+Y SDSF + EVERVLDSIADANNYIAFNVAPVERTI LL+ NFHPD PEGEWSLKLSA S GRKR Sbjct: 238 RVDVYSSRWS-FKARTINEELRMTLAALSGMMVAGERNWGQKNAALLDSLDDNQDAFADIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVKDIQMVYDLVEDRGGLEMLQDERVVVATADISGISMSKAEVSFQVAAKNKARAGLLKDYVSDSFPKEEVERVLDSIADANNYIAFNVAPVERTISLLQDNFHPDKPEGEWSLKLSA-SGGRKR 458
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A2Z6QK00_9GLOM (B box-type domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QK00_9GLOM) HSP 1 Score: 137 bits (345), Expect = 6.790e-30 Identity = 79/225 (35.11%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA---QAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 ++D+ + + SK R + +++ + LSG+MVA D GQ+ + + E+NQ+ F +IFE+GRR+KI NPEK RD YGK+MYML D+ Q + L+ IK VY + +RGG + +V AT +I ++ +++ ++ AK RA L +++ASD ++ E+++ L SI D + Y+ N ER + L+K F+P+ E +SL +S+G +G + Sbjct: 315 KIDIIS--YSSSKTRRMVHQIKDLCSILSGLMVASDYKKGQELINNR-SFEDNQEFFQKIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFNLIIPIKTVYSFLKERGGLAVLHHDYIVDATKEIIPDGKSRPQINKEIRAKERAIENLSRKFASDKLTQEEIKQCLYSIGDNHAYLRGNRDCCERMVQYLQKYFNPNKIEKGYSLAISSGRNGAR 536
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A8H3R479_9GLOM (Glucose-inhibited division protein A subfamily n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3R479_9GLOM) HSP 1 Score: 137 bits (345), Expect = 1.510e-29 Identity = 79/225 (35.11%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA---QAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 ++D+ + + SK R + +++ + LSG+MVA D GQ+ + + E+NQ+ F +IFE+GRR+KI NPEK RD YGK+MYML D+ Q + L+ IK VY + +RGG + +V AT +I ++ +++ ++ AK RA L +++ASD ++ E+++ L SI D + Y+ N ER + L+K F+P+ E +SL +S+G +G + Sbjct: 314 KIDIIS--YSSSKTRRMVHQIKDLCSILSGLMVASDYKKGQELINNR-SFEDNQEFFQKIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFNLIIPIKTVYSFLKERGGLAVLHHDYIVDATKEIIPDGKSRPQINKEIRAKERAIENLSRKFASDKLTQEEIKQCLYSIGDNHAYLRGNRDCCERMVQYLQKYFNPNKIEKGYSLAISSGRNGAR 535
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A8K1CHU6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHU6_PYTOL) HSP 1 Score: 135 bits (340), Expect = 3.190e-29 Identity = 85/216 (39.35%), Postives = 121/216 (56.02%), Query Frame = 3 Query: 1569 SKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA---QAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMT--KAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 S + + QEL+ + +SGMMVA D G K L + E+N F E+FE+GRRYKI NPE+ R+ YGKM+YMLQDA + + +G V I+ V + R R V ATA S S+ +A+ +D + K RA EL+++YAS S S ++ VL SI D+ +Y+ N P+ R I L K F PD E +SL++ AG +G + Sbjct: 179 SPVKRVIQELKEVLSTVSGMMVATDFRKG-KRLVLNNKFEDNDTFFREVFEIGRRYKIMNPERMRNNYGKMIYMLQDASMREIKNYLGFSCVGPIQTVKSFLKKRHALDLLKDRRCVTATAVFSSTSLEDDEAKPEDFLQEKQRAIDELVRDYASSSLSANDIRLVLASIDDSQSYLVSNRTPIIRMIKYLNKFFQPDRIEPNFSLEIRAGRNGAR 393
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: W7TKN4_9STRA (B box-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN4_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.800e-29 Identity = 89/232 (38.36%), Postives = 123/232 (53.02%), Query Frame = 3 Query: 1539 VDVYTGHWGGSKARTINQ-----ELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQA---QGRVGL-ELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGI--SMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 V YT H R Q EL A + G+M+ D G+ A ++ + E+ D F EIFEVGRRYK+ NPEK R +GK+MYMLQDAQ Q ++G V + V L+ DR R++ A+ D+S +AE + K RA EL E+ + S +V+R+LDS+ADANNY+ FNV PV+R + L+ NF D E +SL + G GR+ Sbjct: 229 VSTYTDHVDALGRRATRQSRMVEELERVFATILGLMICADPARGR--ALVVHPIAEHGDFFREIFEVGRRYKVMNPEKLRGTHGKLMYMLQDAQGRSLQAQIGFGSCVKPLATVGALLKDRAQEGFLQDARVLLASRDVSARRGERGRAEARREAWMKRRAARELQVEWGTGELSSDDVQRLLDSMADANNYLNFNVRPVKRVLRQLQDNFAVDEVEEGFSLAIGGGKPGRR 458
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A1Y5IFF3_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IFF3_OSTTA) HSP 1 Score: 133 bits (334), Expect = 7.610e-29 Identity = 78/225 (34.67%), Postives = 130/225 (57.78%), Query Frame = 3 Query: 1539 VDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDT-LEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQA---QGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 VDV++ SK + I ++L+ A + G++VA D GQK ++D ++N+ F ++FE+GRR+K+ NPEK R YGK++++LQD+Q+ Q +G +LV ++ V+ + RGG + AATA+I + + EV + K RAR + +Y+S + + ++ + L SIAD N Y+ FN PV++ + LL K F P E +SL ++ G G + Sbjct: 177 VDVFSYR---SKTQRITRQLKEICAIMCGLVVASDYRAGQK--LIVDKEFKDNEAFFQDVFEIGRRHKVMNPEKMRSEYGKLIFLLQDSQSEEVQELLGFKLVKPLQTVFAFLQSRGGEAMLGDSLIEAATAEIMHEGLPRHEVQRMIKRKERAREVVASKYSSSTLDKEDILQCLYSIADNNAYLRFNRDPVDKMLGLLNKYFDPSAAEKAYSLGITMGMGGAR 396
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A2I1GDN2_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1GDN2_9GLOM) HSP 1 Score: 130 bits (328), Expect = 8.600e-29 Identity = 76/225 (33.78%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA---QAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 ++D+ + + SK R + +++ + LSG+MVA D GQ+ + + E+NQ+ F IFE+GRR+KI NPEK RD YGK+MYML D+ Q + LV IK VY + +R G + + AT +I ++ +++ ++ +K RA L +++A+D+ ++ E++ L SI D + Y+ N ER L+K F+P+ E +SL +S+G +G + Sbjct: 22 KIDIIS--YNSSKTRRMVHQIKDLCSILSGLMVASDYKKGQE-LIINKSFEDNQEFFQRIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFSLVIPIKTVYSFLKERDGLGLLHHDLMAEATKEIIADGKSRPQINQEIRSKERAIEWLSRKFANDNLTQEEIKHCLYSIGDNHAYLRANRDCCERISQYLQKYFNPNKIEKGYSLAISSGRNGAR 243
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A836CCT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT5_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.270e-28 Identity = 88/222 (39.64%), Postives = 125/222 (56.31%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDT-LEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLE-----LVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSA 2183 RVDV+T SK I +E +SG+ +AG G++ DT L +N FA FEVGRRYKI+NP K R YGKMM++LQDA A L+ LV+ ++MV ++ RG R++AATA+++ + + + + AK ARA L++ +AS + S +VER LDSIADAN+Y+ NV PV + LR +F E +SL+L A Sbjct: 103 RVDVFTRR---SKRAVIEEEQSAMLTTMSGLAIAGHVCGGERLVG--DTPLADNAAFFARAFEVGRRYKISNPAKLRATYGKMMFLLQDAVALS-TNLKSRPPALVSQLQMVTPFLEARGAAALLSDARVLAATAEVTERKVGRGGLAAALRAKGEARAALVRAHASPTLSAADVERALDSIADANSYLEANVQPVAAALRCLRAHFTRSKAEDPYSLRLVA 318
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Match: A0A372QIJ8_9GLOM (B box-type domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372QIJ8_9GLOM) HSP 1 Score: 130 bits (328), Expect = 3.500e-28 Identity = 75/225 (33.33%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 1536 RVDVYTGHWGGSKARTINQELRYASAALSGMMVAGDRDWGQKNASLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA---QAQGRVGLELVNDIKMVYDLVDDRGGXXXXXXERLVAATADISGISMTKAEVDDQVAAKNRARAELLKEYASDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLRKNFHPDTPEGEWSLKLSAGSSGRK 2201 ++D+ + + SK R + +++ + LSG+MVA D GQ+ + + E+NQ+ F IFE+GRR+KI NPEK RD YGK+MYML D+ Q + L+ IK VY + +R G + + AT +I ++ +++ ++ +K RA L +++A+D+ ++ E++ L SI D + Y+ N ER L+K F+P+ E +SL +S+G +G + Sbjct: 148 KIDIIS--YNSSKTRRMVHQIKDLCSILSGLMVASDYKKGQE-LIINKSFEDNQEFFQRIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFSLIIPIKTVYSFLKERDGLGLLHHDLMAEATKEIISDGKSRPQINQEIRSKERAIEWLSRKFANDNLTQEEIKHCLYSIGDNHAYLRANRDCCERIAQYLQKYFNPNKIEKGYSLAISSGRNGAR 369 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8106.17100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8106.17100.1 >prot_L-elsbetiae_contig8106.17100.1 ID=prot_L-elsbetiae_contig8106.17100.1|Name=mRNA_L-elsbetiae_contig8106.17100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=275bp MEMLCKHALHVCAVLLQLRPHGCLLVFMCVCPAVCALRMCPAVCAFFSCCback to top mRNA from alignment at L-elsbetiae_contig8106:510..8569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8106.17100.1 ID=mRNA_L-elsbetiae_contig8106.17100.1|Name=mRNA_L-elsbetiae_contig8106.17100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8060bp|location=Sequence derived from alignment at L-elsbetiae_contig8106:510..8569- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8106:510..8569- >mRNA_L-elsbetiae_contig8106.17100.1 ID=mRNA_L-elsbetiae_contig8106.17100.1|Name=mRNA_L-elsbetiae_contig8106.17100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1650bp|location=Sequence derived from alignment at L-elsbetiae_contig8106:510..8569- (Laminarionema elsbetiae ELsaHSoW15)back to top |