mRNA_L-elsbetiae_contig8095.17087.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 189 bits (480), Expect = 5.050e-50 Identity = 117/258 (45.35%), Postives = 151/258 (58.53%), Query Frame = 2 Query: 32 IVVDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP-GRVITVTGV-LADDEWFSILESEVWV 799 I + LYKG+ RTRTI++YVDG TTWTSSG++ FE+V ++ VEL G L+D EWLSI EV I V G +V T + EA GT + T DLYDTRL GCDP GC R G + SRWSC P+LGGP CS++ D+GA Y + +LRL YRGD RTRT++V VDG L TT+TSSG T+ FE +D+ G G+V+T++G AD +W SI+E+E+ V Sbjct: 99 IRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESV-----LLMDQGQVVELVGDLNDDEWLSILEVEIDVDDG-----------IVDDD----TVVVLDVVEAAEMGT-VTATADLYDTRLGDTVGCDPEGCTAALTRDG--------DMSEGSRWSCAPKLGGP---CSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMV 324
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 192 bits (487), Expect = 3.530e-49 Identity = 123/267 (46.07%), Postives = 154/267 (57.68%), Query Frame = 2 Query: 44 LYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPA---PTLVSHPPA-------VPTTAPTFL-EEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDF--NSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP--GRVITVTGVLADDEWFSILESEVWV 799 LYKG R RT++V VDG LATTWTSSG++ FE V L G V + GVL DSEW+SITE IMV + PPSP+ P V P A VP+ F +E G + T L+D L A+NGCDP+GC R G D+ +SRWSC P+LGG G C+++ D+G VY LA++RLA Y+GDER T EV VDG L TT+TSSG T E I G+V+ VTGVL D EW SI+E+ ++V Sbjct: 261 LYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLS----GYSGQDVTVTGVLDDSEWVSITETDIMVLSDSVVSPPSPSTTTPAPVFAPAATXXXXXKVPSPEQLFAAKEIDEIGA-VTTTATLFDPSLLADNGCDPSGCTAGLTRDG----------DYATSSRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYV 512
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.330e-47 Identity = 120/260 (46.15%), Postives = 154/260 (59.23%), Query Frame = 2 Query: 38 VDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPG-PGRVITVTGVLADDEWFSILESEVWVTGTGV 814 + ++KG+ERTRT+E+ +D T WTSSG++A FET+ + GR +E+ GVL DSEWLSI EV I+V G + V TT EA G + T L+D RL NGCDPAGC R G V+++ SRWSC P LGG CS++ D+GAVY L++LRLA Y G R RT++V VDG+LATT+TSSG T FE ID+ G G+ ITVTGVL + EW SI E+E+ V GV Sbjct: 102 IAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFETIEV--DTTGR---WIEIVGVLEDSEWLSIMEVEILVDDG-----------VTDTDDVVDTTE----VEAGSLGI-VTATSALFDPRLGDSNGCDPAGCTAELTRDGD-----VSDE---SRWSCAPSLGGT---CSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVLSDGV 329
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 183 bits (464), Expect = 3.650e-46 Identity = 112/260 (43.08%), Postives = 146/260 (56.15%), Query Frame = 2 Query: 23 LQCIVVDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP-GRVITVTGVLADDEWFSILESEVWV 799 L + + +YKG+ERTRT+++ +D TTWTSSG++ +ET+ L A + + GVL DSEWLSI EV IM+ G T + TT T E G + V YD L + GCDP+GCV N R G + SRWSC P LGG +C+++ D+G VY+L ELRLA Y+G ER TMEV VD TL TT+TSSG T E ID+ G G+ + +TGVL D EW SI+E E+ V Sbjct: 98 LSAVNIAMYKGDERTRTLDISIDNLPYTTWTSSGTTTGYETIEL-----DTMAQWISVVGVLEDSEWLSIMEVEIMIEDGESGS--DDGDTTATDAGDDDTTTSTSAVEVGSLGA-VTVEASFYDPSLTVDGGCDPSGCVADNTRDG--------DLSTASRWSCAPTLGG---ECTISYDLGTVYELDELRLAMYKGTERQVTMEVRVDDTLVTTWTSSGTTDDLEAIDLSGTSGQTVEITGVLDDSEWLSIVEVEIMV 338
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 180 bits (456), Expect = 3.200e-45 Identity = 129/336 (38.39%), Postives = 157/336 (46.73%), Query Frame = 2 Query: 41 DLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVG------------------------------------------------------------------------GLPPPPSP-----APTLVSHPPAVPTTA-PTFLEEAPVFGTN---IVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPG--PGRVITVTGVLADDEWFSILESEVWV 799 D +G+ RTRT++VYVD L T+WTSSG++ FETV V+G +VEL GVL+DSEWLSITEV+ +V G GL PPPSP AP A PT A P L A GT + T DL+D LA +NGCDPAGC R G + SRWSC LGG GA CS++ D+G + L ELR+A Y GD R RT++V VDG L T+TSSG T FE I P G VI + GVL D EW SI+E+E+ V Sbjct: 65 DKTRGDTRTRTMDVYVDQALQTSWTSSGTTNEFETV-----VLGVTGQTVELRGVLADSEWLSITEVKALVEDGATDTDDSEFQIDFPSWATELPPLPNATWRLFLPRHNMSIMTSAHVRGSPTNTSSLPALPYIVQVKIMVLSGDGLAPPPSPPTTTPAPVFAPVATATPTVATPEQLWSAKEIGTQDTTVTTTADLFDPALAIDNGCDPAGCTAALTRDG--------DTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMV 387
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 143 bits (361), Expect = 7.650e-33 Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = 2 Query: 368 NIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGPGRVITVTGVLADDEWFSILESEVWV 799 N+ +LYD RL+AE+GCDP+GCV R G + SRW+CKP LG G++C +T +G YQL+ L +A Y+GDERTRT+E+ +D TT+TSSG T+ FE I++ GR I++ GVLAD EW SI+E ++ + Sbjct: 15 NVTAVAELYDPRLSAESGCDPSGCVAELTRDG-------DATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGRWISIVGVLADSEWLSIMEVKIMI 151
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 1.590e-14 Identity = 47/153 (30.72%), Postives = 82/153 (53.59%), Query Frame = 2 Query: 365 TNIVVTGDLYDTRLAAENG---CDPAG---CVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEI-IDIPGPGRVITVTGVLADDEWFSILESEVWVT 802 T++ V+ +DTR + +G C AG C P N R G+ +++ SRWSC ++ G C + G + ++++AF++GDER RT+EVY DGTL T+ S ++ + + G V+ + L ++EW S++E ++V+ Sbjct: 79 TDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGI-------SNEAESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIFVS 224
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.010e-13 Identity = 55/161 (34.16%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 377 VTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFN----SRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLA--TTYTSSGVTSLFEIIDIP--------------GPGRVITVTGVLADDEWFSILESEVWV 799 VT YDTR + NGC GC P + +N+ D N SRWSC+ L G +C T D+G+ L +L + FY+ D+ R ++ T TTYT TS ++ IP GR + TG LADD+W SI E+E++V Sbjct: 35 VTATKYDTRASDSNGCGTDGCSP----------DLMNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTTYT----TSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYV 181
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.020e-13 Identity = 48/147 (32.65%), Postives = 78/147 (53.06%), Query Frame = 2 Query: 365 TNIVVTGDLYDTRLAAENG---CDPAG---CVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEI-IDIPGPGRVITVTGVLADDEWFSILE 784 T++ V+ YDTR + +G C AG C P N R G+ +++ SRWSC ++ G C + G + ++++AF+ GDER RT+EVY DGTL T+ S ++ + + G G V+ + L ++EW S++E Sbjct: 485 TDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGI-------SNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIE 624
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 4.230e-12 Identity = 52/156 (33.33%), Postives = 74/156 (47.44%), Query Frame = 2 Query: 365 TNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPEL-----GGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGPGRVITVTGV------LADDEWFSILESEVWV 799 T + VT + +D R ++GC P GC N R G + NSRWSC L G G +C V ++G + + +AF +GD RTRT+ + V+G L TS G TS E ++ G V + L DE+ SI+E E+ V Sbjct: 254 TTVTVTTNAFDARTD-DDGCAPDGCTGENTRDG--------DLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 400 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8095.17087.1 >prot_L-elsbetiae_contig8095.17087.1 ID=prot_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp MVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDback to top mRNA from alignment at L-elsbetiae_contig8095:137..4427+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8095.17087.1 ID=mRNA_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4291bp|location=Sequence derived from alignment at L-elsbetiae_contig8095:137..4427+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8095:137..4427+ >mRNA_L-elsbetiae_contig8095.17087.1 ID=mRNA_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig8095:137..4427+ (Laminarionema elsbetiae ELsaHSoW15)back to top |