mRNA_L-elsbetiae_contig8095.17087.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8095.17087.1
Unique NamemRNA_L-elsbetiae_contig8095.17087.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 5.050e-50
Identity = 117/258 (45.35%), Postives = 151/258 (58.53%), Query Frame = 2
Query:   32 IVVDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP-GRVITVTGV-LADDEWFSILESEVWV 799
            I + LYKG+ RTRTI++YVDG   TTWTSSG++  FE+V     ++      VEL G L+D EWLSI EV I V  G           +V       T     + EA   GT +  T DLYDTRL    GCDP GC     R G        +    SRWSC P+LGGP   CS++ D+GA Y + +LRL  YRGD RTRT++V VDG L TT+TSSG T+ FE +D+ G  G+V+T++G   AD +W SI+E+E+ V
Sbjct:   99 IRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESV-----LLMDQGQVVELVGDLNDDEWLSILEVEIDVDDG-----------IVDDD----TVVVLDVVEAAEMGT-VTATADLYDTRLGDTVGCDPEGCTAALTRDG--------DMSEGSRWSCAPKLGGP---CSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMV 324          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.530e-49
Identity = 123/267 (46.07%), Postives = 154/267 (57.68%), Query Frame = 2
Query:   44 LYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPA---PTLVSHPPA-------VPTTAPTFL-EEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDF--NSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP--GRVITVTGVLADDEWFSILESEVWV 799
            LYKG  R RT++V VDG LATTWTSSG++  FE V L     G     V + GVL DSEW+SITE  IMV    +  PPSP+   P  V  P A       VP+    F  +E    G  +  T  L+D  L A+NGCDP+GC     R G          D+  +SRWSC P+LGG G  C+++ D+G VY LA++RLA Y+GDER  T EV VDG L TT+TSSG T   E I       G+V+ VTGVL D EW SI+E+ ++V
Sbjct:  261 LYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLS----GYSGQDVTVTGVLDDSEWVSITETDIMVLSDSVVSPPSPSTTTPAPVFAPAATXXXXXKVPSPEQLFAAKEIDEIGA-VTTTATLFDPSLLADNGCDPSGCTAGLTRDG----------DYATSSRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYV 512          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.330e-47
Identity = 120/260 (46.15%), Postives = 154/260 (59.23%), Query Frame = 2
Query:   38 VDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPG-PGRVITVTGVLADDEWFSILESEVWVTGTGV 814
            + ++KG+ERTRT+E+ +D    T WTSSG++A FET+ +     GR    +E+ GVL DSEWLSI EV I+V  G           +      V TT      EA   G  +  T  L+D RL   NGCDPAGC     R G      V+++   SRWSC P LGG    CS++ D+GAVY L++LRLA Y G  R RT++V VDG+LATT+TSSG T  FE ID+ G  G+ ITVTGVL + EW SI E+E+ V   GV
Sbjct:  102 IAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFETIEV--DTTGR---WIEIVGVLEDSEWLSIMEVEILVDDG-----------VTDTDDVVDTTE----VEAGSLGI-VTATSALFDPRLGDSNGCDPAGCTAELTRDGD-----VSDE---SRWSCAPSLGGT---CSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVLSDGV 329          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 3.650e-46
Identity = 112/260 (43.08%), Postives = 146/260 (56.15%), Query Frame = 2
Query:   23 LQCIVVDLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGP-GRVITVTGVLADDEWFSILESEVWV 799
            L  + + +YKG+ERTRT+++ +D    TTWTSSG++  +ET+ L        A  + + GVL DSEWLSI EV IM+  G          T  +      TT  T   E    G  + V    YD  L  + GCDP+GCV  N R G        +    SRWSC P LGG   +C+++ D+G VY+L ELRLA Y+G ER  TMEV VD TL TT+TSSG T   E ID+ G  G+ + +TGVL D EW SI+E E+ V
Sbjct:   98 LSAVNIAMYKGDERTRTLDISIDNLPYTTWTSSGTTTGYETIEL-----DTMAQWISVVGVLEDSEWLSIMEVEIMIEDGESGS--DDGDTTATDAGDDDTTTSTSAVEVGSLGA-VTVEASFYDPSLTVDGGCDPSGCVADNTRDG--------DLSTASRWSCAPTLGG---ECTISYDLGTVYELDELRLAMYKGTERQVTMEVRVDDTLVTTWTSSGTTDDLEAIDLSGTSGQTVEITGVLDDSEWLSIVEVEIMV 338          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 3.200e-45
Identity = 129/336 (38.39%), Postives = 157/336 (46.73%), Query Frame = 2
Query:   41 DLYKGEERTRTIEVYVDGELATTWTSSGSSASFETVPLPPSVVGRPASSVELHGVLSDSEWLSITEVRIMVTVG------------------------------------------------------------------------GLPPPPSP-----APTLVSHPPAVPTTA-PTFLEEAPVFGTN---IVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPG--PGRVITVTGVLADDEWFSILESEVWV 799
            D  +G+ RTRT++VYVD  L T+WTSSG++  FETV     V+G    +VEL GVL+DSEWLSITEV+ +V  G                                                                        GL PPPSP     AP       A PT A P  L  A   GT    +  T DL+D  LA +NGCDPAGC     R G        +    SRWSC   LGG GA CS++ D+G  + L ELR+A Y GD R RT++V VDG L  T+TSSG T  FE I  P    G VI + GVL D EW SI+E+E+ V
Sbjct:   65 DKTRGDTRTRTMDVYVDQALQTSWTSSGTTNEFETV-----VLGVTGQTVELRGVLADSEWLSITEVKALVEDGATDTDDSEFQIDFPSWATELPPLPNATWRLFLPRHNMSIMTSAHVRGSPTNTSSLPALPYIVQVKIMVLSGDGLAPPPSPPTTTPAPVFAPVATATPTVATPEQLWSAKEIGTQDTTVTTTADLFDPALAIDNGCDPAGCTAALTRDG--------DTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMV 387          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 7.650e-33
Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = 2
Query:  368 NIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGPGRVITVTGVLADDEWFSILESEVWV 799
            N+    +LYD RL+AE+GCDP+GCV    R G       +     SRW+CKP LG  G++C +T  +G  YQL+ L +A Y+GDERTRT+E+ +D    TT+TSSG T+ FE I++   GR I++ GVLAD EW SI+E ++ +
Sbjct:   15 NVTAVAELYDPRLSAESGCDPSGCVAELTRDG-------DATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGRWISIVGVLADSEWLSIMEVKIMI 151          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.590e-14
Identity = 47/153 (30.72%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  365 TNIVVTGDLYDTRLAAENG---CDPAG---CVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEI-IDIPGPGRVITVTGVLADDEWFSILESEVWVT 802
            T++ V+   +DTR  + +G   C  AG   C P N R G+       +++  SRWSC  ++   G  C +    G    + ++++AF++GDER RT+EVY DGTL  T+ S   ++   + +   G   V+  +  L ++EW S++E  ++V+
Sbjct:   79 TDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGI-------SNEAESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIFVS 224          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.010e-13
Identity = 55/161 (34.16%), Postives = 76/161 (47.20%), Query Frame = 2
Query:  377 VTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFN----SRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLA--TTYTSSGVTSLFEIIDIP--------------GPGRVITVTGVLADDEWFSILESEVWV 799
            VT   YDTR +  NGC   GC P          + +N+ D N    SRWSC+  L G   +C  T D+G+   L +L + FY+ D+  R    ++  T    TTYT    TS  ++  IP                GR +  TG LADD+W SI E+E++V
Sbjct:   35 VTATKYDTRASDSNGCGTDGCSP----------DLMNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTTYT----TSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYV 181          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.020e-13
Identity = 48/147 (32.65%), Postives = 78/147 (53.06%), Query Frame = 2
Query:  365 TNIVVTGDLYDTRLAAENG---CDPAG---CVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEI-IDIPGPGRVITVTGVLADDEWFSILE 784
            T++ V+   YDTR  + +G   C  AG   C P N R G+       +++  SRWSC  ++   G  C +    G    + ++++AF+ GDER RT+EVY DGTL  T+ S   ++   + +   G G V+  +  L ++EW S++E
Sbjct:  485 TDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGI-------SNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIE 624          
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 4.230e-12
Identity = 52/156 (33.33%), Postives = 74/156 (47.44%), Query Frame = 2
Query:  365 TNIVVTGDLYDTRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPEL-----GGPGAKCSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSLFEIIDIPGPGRVITVTGV------LADDEWFSILESEVWV 799
            T + VT + +D R   ++GC P GC   N R G        +   NSRWSC   L     G  G +C V  ++G    +  + +AF +GD RTRT+ + V+G L    TS G TS  E  ++ G      V  +      L  DE+ SI+E E+ V
Sbjct:  254 TTVTVTTNAFDARTD-DDGCAPDGCTGENTRDG--------DLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 400          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8095.17087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1V3_9PHAE5.050e-5045.35F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KL74_9PHAE3.530e-4946.07F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KFA6_9PHAE1.330e-4746.15F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI3.650e-4643.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FZZ4_ECTSI3.200e-4538.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH45_9PHAE7.650e-3346.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F6_ECTSI1.590e-1430.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTK7_9PHAE1.010e-1334.16F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JTT4_9PHAE1.020e-1332.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G277_ECTSI4.230e-1233.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8095contigL-elsbetiae_contig8095:137..4427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score136.3
Seed ortholog evalue1.5e-29
Seed eggNOG ortholog2880.D7FL48
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1476
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816894.1197965-UTR-L-elsbetiae_contig8095:136..3741622816894.1197965-UTR-L-elsbetiae_contig8095:136..374Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 137..374 +
1691683893.2627118-UTR-L-elsbetiae_contig8095:136..3741691683893.2627118-UTR-L-elsbetiae_contig8095:136..374Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 137..374 +
1622816894.1334763-UTR-L-elsbetiae_contig8095:1343..13521622816894.1334763-UTR-L-elsbetiae_contig8095:1343..1352Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 1344..1352 +
1691683893.2785556-UTR-L-elsbetiae_contig8095:1343..13521691683893.2785556-UTR-L-elsbetiae_contig8095:1343..1352Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 1344..1352 +
1622816894.1957607-UTR-L-elsbetiae_contig8095:3783..44271622816894.1957607-UTR-L-elsbetiae_contig8095:3783..4427Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 3784..4427 +
1691683893.3537314-UTR-L-elsbetiae_contig8095:3783..44271691683893.3537314-UTR-L-elsbetiae_contig8095:3783..4427Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8095 3784..4427 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816894.1473327-CDS-L-elsbetiae_contig8095:1352..15621622816894.1473327-CDS-L-elsbetiae_contig8095:1352..1562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 1353..1562 +
1691683893.2897804-CDS-L-elsbetiae_contig8095:1352..15621691683893.2897804-CDS-L-elsbetiae_contig8095:1352..1562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 1353..1562 +
1622816894.1598186-CDS-L-elsbetiae_contig8095:1915..20601622816894.1598186-CDS-L-elsbetiae_contig8095:1915..2060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 1916..2060 +
1691683893.3096561-CDS-L-elsbetiae_contig8095:1915..20601691683893.3096561-CDS-L-elsbetiae_contig8095:1915..2060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 1916..2060 +
1622816894.173235-CDS-L-elsbetiae_contig8095:2760..29421622816894.173235-CDS-L-elsbetiae_contig8095:2760..2942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 2761..2942 +
1691683893.3231087-CDS-L-elsbetiae_contig8095:2760..29421691683893.3231087-CDS-L-elsbetiae_contig8095:2760..2942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 2761..2942 +
1622816894.1839015-CDS-L-elsbetiae_contig8095:3735..37831622816894.1839015-CDS-L-elsbetiae_contig8095:3735..3783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 3736..3783 +
1691683893.33828-CDS-L-elsbetiae_contig8095:3735..37831691683893.33828-CDS-L-elsbetiae_contig8095:3735..3783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8095 3736..3783 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8095.17087.1prot_L-elsbetiae_contig8095.17087.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8095 1353..3783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8095.17087.1

>prot_L-elsbetiae_contig8095.17087.1 ID=prot_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MVTVGGLPPPPSPAPTLVSHPPAVPTTAPTFLEEAPVFGTNIVVTGDLYD
TRLAAENGCDPAGCVPTNIRTGVNPINFVNNDDFNSRWSCKPELGGPGAK
CSVTLDVGAVYQLAELRLAFYRGDERTRTMEVYVDGTLATTYTSSGVTSL
FEIIDIPGPGRVITVTGVLADDEWFSILESEVWVTGTGVPEFRL*
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mRNA from alignment at L-elsbetiae_contig8095:137..4427+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8095.17087.1 ID=mRNA_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4291bp|location=Sequence derived from alignment at L-elsbetiae_contig8095:137..4427+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAAGCACACAACTCCCGCCCCTGCAATGTATCGTCGTAGACCTGTACA AGGGCGAGGAAAGAACTCGCACGATCGAAGTGTACGTCGACGGCGAGCTA GCGACCACGTGGACAAGTTCGGGTAGCTCGGCCAGCTTCGAGACAGTTCC CCTGCCGCCAAGTGTCGTTGGCCGGCCGGCGAGTAGCGTTGAGCTGCATG GCGTCCTGTCCGACTCGGAATGGCTCAGCATCACCGAGGTGCGTGTGCGT GTGTGATACTTCATTGAAAAAGTGGAGAGCTGTGTCGCCATTAAACGTGA TGGATGACTCTGTCCATCTTGCGCATATAACAACCACCCGGAATCGTGTG AATAGAGGGTTCACACTGCTCGGCCTTTGGCTCGTAGCTTGTATTTCGCT TCTGAGGCTTGAATTTCATCCTGACCTCCACCCTCTTCTGATGACCCCCG CCTTCGAAAATCAAAATGTTCTTCATACTATGCAGCAGACAAGACTCTTT GCTGAGATAGATATCGTAGCGAAGTCCAAACACTGACGTCATAATATCCC GCCCAAGTAGCGAAGCACCTCAAGCATTAGACGAGATCAATACTCGCTTC ACGACTCTCCCAGCTCAACCAGCAAATATTTCCGGAGAGAAGCCCGCCGA AAACCGCTTCATCATTCGGACAGGCTTGGGTGATCTACCGTCGCTCTTTT CTGTTGGGCCCACGAGCAGTGCCGGCTGCCAACCGGCAAAATAGCGTGGT TGTCCGCCTACATATGTACCGCATCACTCAACTCGCTTGCCTTGCGAAGC GCTGACAAGCCGGCCGGGTTTTGCACACAATAGGAAGCATTATTTCCCCT GGCGTGAGTGTCCATGGTATGTATGCTTTGACTTTGGTGTGCGGAAGCCC GACGGCCTTCTGTCTTTCATGTCCGCCGACGGCAGCAGCGATGACATTGC CTCCACCGCTTCGAATACGCCGATCGATCACGTCGACCCCGCCAGCCTGG CTCGCAACGGCGAACGACACGCAGCGAGGCGTGTGCGTGTGCGTGTGCGT GTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGT AAACGTTTCAAGCGCCATCATATTTATCAGCCTTGACCGCCGTTCTGCCG CGCACGTGCGTGCGTGTGTTGTGTGCTATTTACACACGTATTTAATAAAC GAAACAGGTGAGAATCATGGTGACAGTCGGTGGGCTGCCCCCCCCACCCT CCCCAGCGCCGACGCTCGTCAGCCACCCTCCCGCCGTACCCACCACCGCA CCAACGTTTCTCGAAGAGGCTCCCGTTTTCGGGACGAACATTGTCGTCAC CGGGGACCTTTACGACACCAGGCTCGCGGCTGAAAACGGATGCGACCCCG CCGGCTGTGTGCCGACGAACATCAGGGTGAGCGAAACCCAACCTCAGACA CGCCTGGTAGACGTGATAAGTGCGAGCAACCTACATGCATAGGCGAGTCT GCCTAACTAGGTATTTTGCGACAGCACCTTCTGTTTTCGCGCGCCCACCC GTTTTTCTTGTTTTGTGGCCATCCATGCCTTCATCGTTTCAGGAGCGCTA TTTAGTGTTGTAGGCTTATGGGGCCGCGGCCGCGTCAGATTCCGACCCTT GGGCCCGTGTACACAGCACGTACGTACACACATTGCGGGAAAAAGCATGG AAAATTGTGACGCGCGTCTTCGTGACCCCTGAGCTCAGTGTAACTCCTCC CCGCACTGTTCTCCGCGCCTTGCCTGCAGACCGGTGTAAACCCCATCAAC TTTGTGAACAACGATGACTTCAACTCACGCTGGTCATGCAAGCCAGAGCT TGGTGGCCCCGGGGCCAAGTGCAGCGTCACGCTCGATGTTGGGGCCGTCT ACCAGCTGGCGGAGCTCCGACTGGGTGAGAGATCACACGCGGTAGACCGC CCAACCTGATACGGATCTGCGGGCTGCACGACGTTTCCGCCCGGCCCATT AGTGCGGACGCAAAATAAAGCGCGCCACGTGTTTGCAAGGAGGTTCAACC AATACTCACCGAGCCCGTCTTAAAAAAAATAGTTGCTTGGTTTTCGGAAG CTCTGGCTCAGGGATTCTCAACTTCGTCCTTTTCGGGAATATGCTTGTTC ATCTTGGCCGTCATGTATTCTGCGTTGAGGGGTTGCTGTGCGCATGCGTG TGTGTGAAGCTAGAGGGCGCTTTGCGATATGCATTGTTCGATTCCGGCCG CTCTCTCGGCATGTGATTGCACCTTGGAGGCATAGGTTAGACCATTGGTG TATTGATGTATTGTGATATCCGAACCTAGCCGCATCCGCTGGTGGCTGTC GCAGCGTTTCCGTACTCCCTCCTCCCTGGGGATGATACCCGATGTACTTC AAGAAGTCCGGTGAAAACGTCAAATTTCGCTCTTCTGGTCCGTGATTCCT GCTGAAAGCTCTGGCCGAAACGTGGATTCCCATACACTTTCTCTTTAGCG CGAGGCTCTTCTTTGCCGGAACCTCTTGCCAAACTGCTGTCCCGCCCAGC GCTCCTCTCTGATTAAACTATTTAATTCGCAACTTTCGCCCCAACCTCGT GCTCCGCCCGCTGCATGCATGCAGCCTTCTACAGGGGCGATGAGAGGACG AGGACCATGGAAGTGTACGTCGACGGTACGCTGGCCACGACGTACACCAG CTCGGGTGTCACATCCCTCTTCGAGATTATCGATATCCCCGGGCCCGGCA GGGTGATCACCGTGACGGGCGTGCTGGCTGACGACGAATGGTTCAGCATC CTCGAGGTCGGTGCAGTACTAACTCCGGTCACTGATACATAGGGATGCTT GCCAGGTTGTATGTATTCCACGGTGCCAGCCGGCCGTGTCTACCCCGGAT CAAATGGGCCCCGGTATACAACCGTCTTCACCCTTAACGCGTAATCCGTC CGTTGCCCTATGTAGCGCTATACGACGCAAGATAACACACCCCCCGGACC AATTTTCAAAGCTCAAGTACTCCACAGCGAGAAGAGTGTCAGTCCCGATA AGGGCGGCGTTGGAAAGATCCCATCAAGAGCTGTCCGAAAACGTGTCGTT TGGTATTAAAATCATCGTTGCGGTGTAGCCGAGCCTTGACAATCAATCCA GGGGGTGTGTTATCTTGTGTCGTATTAATACGAGATGTAGTGCTTGACGT TCATTGCTTGAAAGGATTTCACGCTCGGCCGCGAGTGTTTTCGTGAAGAA TATGAAAAAAACATCTGCAACCGCAATGCTGAGCGAACTACATAGAGCCG ACACAACGTGACGATTTTGACTGATCCTCTGGTGCTGATAAGAGAATCGC GCACACATTATAGACACTTTAGGTGCTCCTCCGATCTTTTAAAACAGCAC GCAGTGAACCCGATATATTTTCCTTTTTGGCCCAATATGTCGCACGCACG TTGCCGACCGTACATAGTATATTTAGACTAGTCTAGATGTCCCTGCCGGT GTCACGAGGAAAACAATTCATGTTCACCCACTGAAACTTTTCCCTTTTCC TTTTTCGGATGCTTTTGTCTGCTGCTGCTGCGGTTGATGAACACACCAGA GCGAGGTGTGGGTAACTGGAACGGGGGTTCCGGAGTTCCGCCTCTAACAG GTACAACGAGGCTACCCGCTTATCAGACCAGGGGCTAGACTATACCCCCA AGATTGGTCGGGAGCAAATACCTCACGACAACAAAGAGTTGTGAACAGCT TCGAAGCTCGTTGGTAATGTTTCGGAGGGTATAAAAGGGCGCGGGTCCGA CTTGGTAGGGTTGTGAGAGATCGTCACATGACGGCTATGGTGGGCGTGCT ATCTATGTAGATACTGCAGATGCGGCCAAGGAGCATCGTTCGTGTTGACC TTGGAAAATCGCGAGGAGGGTGGGTTGAAGATTTGTTTGCGACGACTGTT GATGGCCACTCTGCATTGAGGGAGCGATTTCGTTGACCCTCGGAGTCGTG TGGTCATTGGCTGTCCCTACGTTGCCGTCGAGCGCTGCTCAACCTAGAGT AGGTGGAGTGTCTACGCACGCGACGACATGTTTCACGATTGATTCCACAC AACATATTTGACCGTTGAGTCTATCCAGCCCGGACGTCGGTTGTGTGTGC TCGCCAGAGTTTTTGTCCTTCTTTGCAACGCAAACGATAGGTTCGAGTAA ATTAAGTAATTCCGAATTCCACACTTTGTTTTTCATTTGGGACTGATTTT AGATAAACAGCTGCTGCGTGGAAGAAGACGACAGTACCATA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8095:137..4427+

>mRNA_L-elsbetiae_contig8095.17087.1 ID=mRNA_L-elsbetiae_contig8095.17087.1|Name=mRNA_L-elsbetiae_contig8095.17087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig8095:137..4427+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGACAGTCGGTGGGCTGCCCCCCCCACCCTCCCCAGCGCCGACGCT
CGTCAGCCACCCTCCCGCCGTACCCACCACCGCACCAACGTTTCTCGAAG
AGGCTCCCGTTTTCGGGACGAACATTGTCGTCACCGGGGACCTTTACGAC
ACCAGGCTCGCGGCTGAAAACGGATGCGACCCCGCCGGCTGTGTGCCGAC
GAACATCAGGATGGTGACAGTCGGTGGGCTGCCCCCCCCACCCTCCCCAG
CGCCGACGCTCGTCAGCCACCCTCCCGCCGTACCCACCACCGCACCAACG
TTTCTCGAAGAGGCTCCCGTTTTCGGGACGAACATTGTCGTCACCGGGGA
CCTTTACGACACCAGGCTCGCGGCTGAAAACGGATGCGACCCCGCCGGCT
GTGTGCCGACGAACATCAGGACCGGTGTAAACCCCATCAACTTTGTGAAC
AACGATGACTTCAACTCACGCTGGTCATGCAAGCCAGAGCTTGGTGGCCC
CGGGGCCAAGTGCAGCGTCACGCTCGATGTTGGGGCCGTCTACCAGCTGG
CGGAGCTCCGACTGGACCGGTGTAAACCCCATCAACTTTGTGAACAACGA
TGACTTCAACTCACGCTGGTCATGCAAGCCAGAGCTTGGTGGCCCCGGGG
CCAAGTGCAGCGTCACGCTCGATGTTGGGGCCGTCTACCAGCTGGCGGAG
CTCCGACTGGCCTTCTACAGGGGCGATGAGAGGACGAGGACCATGGAAGT
GTACGTCGACGGTACGCTGGCCACGACGTACACCAGCTCGGGTGTCACAT
CCCTCTTCGAGATTATCGATATCCCCGGGCCCGGCAGGGTGATCACCGTG
ACGGGCGTGCTGGCTGACGACGAATGGTTCAGCATCCTCGAGCCTTCTAC
AGGGGCGATGAGAGGACGAGGACCATGGAAGTGTACGTCGACGGTACGCT
GGCCACGACGTACACCAGCTCGGGTGTCACATCCCTCTTCGAGATTATCG
ATATCCCCGGGCCCGGCAGGGTGATCACCGTGACGGGCGTGCTGGCTGAC
GACGAATGGTTCAGCATCCTCGAGAGCGAGGTGTGGGTAACTGGAACGGG
GGTTCCGGAGTTCCGCCTCTAAAGCGAGGTGTGGGTAACTGGAACGGGGG
TTCCGGAGTTCCGCCTCTAA
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