mRNA_L-elsbetiae_contig8078.17070.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: D7FWH9_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH9_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 6.160e-160 Identity = 255/388 (65.72%), Postives = 285/388 (73.45%), Query Frame = 1 Query: 1 QAQALMDKGAPLLPPSSPAPAVMSTSPDAHAEAVSSLLSTPAPRAPXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXX-----SGGCYRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEVYGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAMDASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRG----------EEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 QA+ ++++ PLL P + ++++PDA+ +A+ SLLSTP G S YRVFLERLTR ES+GFV AIRLFLFSILGNGGAV+PA GRPRA RRETEEVEVYGSSFL QRCAEFFLAMQNAMGVH SWAELGYD LVACR HLERFVM+KIHPLA G KL+GA+DASISARL +LQFLTPHDLNV VYAR+ETVL LAQEELRKMGRGRCPGDIV RV RCCDT+F+L+DQGRR K+G + ++WRPE DPAGTADDFLPV LIYVVLRARVPRLHSMCEYVQAFHSPVALM RPGYCFVALRSAV FLM ++GAAVGMSEQ+FRR Sbjct: 66 QAETVLNEAVPLLQPPXXXSSPVASTPDAYTKAIRSLLSTPKANTAATARSTRAPSNSSGHPRVQSGGPPSVRRAERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPRASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRXXXXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPV-LIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 452
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: F0WL76_9STRA (Uncharacterized protein AlNc14C141G7264 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL76_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.880e-46 Identity = 107/293 (36.52%), Postives = 159/293 (54.27%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEVYGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGV----KLNGAMDASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 Y F+ RL +P+S+ A+RLF+ SILG G SP R G+ L RC FF M++ +G+HP+W + L R +E+FVM K+ A+ KL A D ++ R+ LQF+TP L++ ++E V ++AQ+ELR++ PGD + +ERCC+ IFS+L L RG E RP ADDFLP+ IY+VLR+++P+L+S CEY+ A+ +P LM + GYC V LRSA+ F++ +DG + + Q+F R Sbjct: 303 YVDFMNRLRQPDSRDLYFAVRLFVESILGPKGDGSPPSYNDRVIYT-----------FRGTQKLRARCHHFFQGMEDRLGIHPAWRQASEKDLQGAREWIEKFVMDKVFHFAMFTQNECKLWEAEDRRLARRMKILQFITPEMLDIKQCMQNEIVWSMAQDELRRINGVTSPGDKIGCIERCCNVIFSVLS----LSRGASES---------RPG------ADDFLPL-FIYIVLRSQIPQLYSNCEYITAYRNPSDLMTKSGYCLVNLRSALEFIVALDGTMLSVPAQDFAR 564
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A3F2RKA8_9STRA (VPS9 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKA8_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.130e-45 Identity = 108/295 (36.61%), Postives = 161/295 (54.58%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 Y FL+R++ P S+ + IR+F+ SILG G +GRP R T+ VE YG +RC FF M++ + HP+W +L R +E++VM K+ +A D ++ R+ L F+TP L++ R+E V ++A++ELR++ R PGD + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +++PRL+S CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + +S EF+R Sbjct: 178 YGEFLQRISLPASRDILDKIRMFVGSILGPRG-----DGRPP--------RSTDYVEYDFYGKHEFRRRCTRFFENMEDLLQDHPAWRHASETKLAKARDGIEKYVMDKVSDIACNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSQIPRLYSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISNDEFQR 439
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A329SIN0_9STRA (VPS9 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIN0_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.430e-45 Identity = 110/295 (37.29%), Postives = 163/295 (55.25%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 Y FL+R++ P S+ + IR+F+ SILG G +GRP R T+ VE YG +RC FF +M++ + HP+W +L R +E++VM K+ +A D ++ R+ L F+TP L++ R+E V ++A++ELR++ R PGD + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +++PRLHS CEY+ A+ + LM + GYCFV LRSAV F+M +DG+ + +S+ EF+R Sbjct: 434 YGEFLQRISLPASRDILDKIRMFVGSILGPRG-----DGRPP--------RSTDYVEYDFYGKHEFRRRCVRFFESMEDILLNHPAWRRASEAKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAVEFIMAMDGSMLSISDDEFQR 695
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: G4Z8U2_PHYSP (VPS9 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8U2_PHYSP) HSP 1 Score: 176 bits (446), Expect = 2.230e-44 Identity = 109/295 (36.95%), Postives = 161/295 (54.58%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 Y FL+R++ P S+ + IR+F+ SILG G +GRP R T+ VE YG +RC FF M+ + HP+W +L R +E++VM K+ +A D ++ R+ L F+TP L++ R+E V ++A++ELR++ R PGD + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +++PRLHS CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + +S+ EF+R Sbjct: 421 YGEFLQRISLPASRDILDKIRMFVGSILGPRG-----DGRPP--------RSTDYVEYDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEGKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISDDEFQR 682
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A3M6VKN3_9STRA (VPS9 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN3_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.810e-43 Identity = 108/295 (36.61%), Postives = 165/295 (55.93%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAMD-----ASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFR 1116 Y FL R+++P S+ + IR+F+ SILG G +GRP R T+ +E YG+ L +RC FF +M + + HP+W + +L R +E++VM K+ +A +L D ++ R+ L F+TP L++ R+E V +LA++ELR++ R PG+ + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +++PRLHS CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + + + EF+ Sbjct: 419 YGEFLHRISQPASRDILNKIRMFVGSILGPRG-----DGRPP--------RSTDYIEYCFYGTHELRRRCNRFFESMGDNLLHHPAWRHVSDAKLAKARDGIEKYVMDKVSDIAFN-RLKECHDWVKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSLAEDELRRINSFRSPGEKINCIVRCCGVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSIPDDEFQ 679
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A6A4EIB8_9STRA (VPS9 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EIB8_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.970e-43 Identity = 110/295 (37.29%), Postives = 161/295 (54.58%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 Y FL+R++ P S+ + IR+F+ SILG G +GR AP R T+ VE YG +RC FF M+ + HP+W +L R +E++VM K+ +A D ++ R+ L F+TP L++ R+E V ++A++ELR++ R PGD + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +++PRLHS CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + +S EF+R Sbjct: 418 YGEFLQRVSLPASRDILDKIRMFVGSILGPRG-----DGR-----AP---RSTDYVEFDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEAKLAKARDGIEKYVMDKVSDIAYNQLKECQQWVKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSLSGDEFQR 679
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A0P1A5P0_PLAHL (Vacuolar assembly/sorting protein VPS9 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5P0_PLAHL) HSP 1 Score: 166 bits (420), Expect = 7.740e-42 Identity = 102/296 (34.46%), Postives = 158/296 (53.38%), Query Frame = 1 Query: 244 GGCYRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEVYGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 G Y FL+R++ P S+ + +R+F+ SILG PR P + E + YG +RC++FF++M + + HP W L R +E++VM ++ +A D ++ R+ L F+TP L++ R+E V ++A++ELR++ + PGD + + RCC IFS+L+ R GD GS RP ADDFLPV IY+VL +R+ RL S CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + +S+ EF+R Sbjct: 314 GLSYGEFLQRISLPASRDILDKMRMFVGSILG-----------PRGDGQPPRSTDYVEYDFYGHHEFRRRCSQFFVSMDDLLQTHPVWCHASETILTKARDGVEKYVMDRVSDIAFNQLQECQQWMEEDKNLLRRMKLLSFITPAMLDIKPCIRNEVVWSMAEDELRRINQFCSPGDKINCIVRCCSVIFSVLNLSR---------GDSGS----RPG------ADDFLPV-FIYIVLHSRISRLCSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISDGEFQR 578
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A484EA30_BRELC (VPS9 domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA30_BRELC) HSP 1 Score: 163 bits (412), Expect = 9.710e-41 Identity = 108/306 (35.29%), Postives = 163/306 (53.27%), Query Frame = 1 Query: 253 YRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEV--YGSSFLVQRCAEFFLAMQNAMGVHPSWAELGYDRLVACRAHLERFVMTKIHPLALGVKLNGAM-----DASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCR----------PGYCFVALRSAVSFLMDIDGAAVGMSEQEFRR 1119 YR FL+RL+ P S+ + IR F+ SILG G +G+P R T+ VE YG+S RC +FF +M++ + H W +G + R +E++VM K+ +AL +L D + R+ L F+TP L++ R+E V ++A++ELR++ R PGD + + RCC+ IFS G L RG+ + RP ADDFLP+ IY+VL +R+ RLH+ CEY+ A+ + LM + GYCFV LRSA+ F+M +DG+ + +S EF+R Sbjct: 304 YREFLQRLSLPASRDLLDKIRTFVGSILGPRG-----DGKPP--------RSTDYVEYNFYGNSKFRDRCNDFFSSMEDTLQNHVMWRHVGDATMAKARDGIEKYVMDKVSDIALN-QLEECQQWRKEDEKLLRRMQILSFVTPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCNVIFS----GLNLARGDSKS---------RPG------ADDFLPL-FIYIVLHSRINRLHANCEYISAYRNQADLMSKWEFQRRHMIKAGYCFVNLRSAIEFIMMMDGSMLTISHDEFQR 575
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Match: A0A7R9YBU0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBU0_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.870e-36 Identity = 105/295 (35.59%), Postives = 150/295 (50.85%), Query Frame = 1 Query: 241 SGGCYRVFLERLTRPESKGFVRAIRLFLFSILGNGGAVSPAEGRPRAFLAPGGRRETEEVEVYGSSFLVQRCAEFFLAMQNAMGVHPSWAE----LGYDRLVACRAHLERFVMTKIHPLALGVKLNGAMDASISARLSALQFLTPHDLNVGVYARDETVLALAQEELRKMGRGRCPGDIVMRVERCCDTIFSLLDQGRRLKRGEEEDGDPGSGAAWRPELDPAGTADDFLPVVLIYVVLRARVPRLHSMCEYVQAFHSPVALMCRPGYCFVALRSAVSFLMDIDGAAVGMSEQEF 1113 +G Y F+ RL +P S + +R + SIL + AE P E+ G+ F+ M +M H +W + D L++ R LE+FVM+KI + A D ++ ++ L+ LTP DL+V Y ++E L LA ELRK+ PG+ + V +C IFS+L+ R KRG+ RP ADDFLPV IYVVL+ARVP+L S C Y++AFH+PV LM + GYCFV L SA +F+MD+D ++GM + F Sbjct: 165 NGMSYEEFIVRLLQPASSDLLDYVRNLINSILH-----AHAENDPSC------------EELRGT------LTNFYGVMITSMASHRAWGSANPPVDEDGLLSARNWLEKFVMSKIGHICFAAAQETAQDDALLRKMEQLRLLTPEDLHVPEYVQNELSLELAAAELRKINGVVTPGEKIACVVQCATMIFSVLNLAR--KRGDTTS---------RPG------ADDFLPV-FIYVVLQARVPKLQSNCAYIEAFHNPVNLMSKAGYCFVNLCSASAFIMDLDCTSIGMDPKAF 418 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8078.17070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8078.17070.1 >prot_L-elsbetiae_contig8078.17070.1 ID=prot_L-elsbetiae_contig8078.17070.1|Name=mRNA_L-elsbetiae_contig8078.17070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp MDKGAPLLPPSSPAPAVMSTSPDAHAEAVSSLLSTPAPRAPPGAPDGPPLback to top mRNA from alignment at L-elsbetiae_contig8078:3916..8988- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8078.17070.1 ID=mRNA_L-elsbetiae_contig8078.17070.1|Name=mRNA_L-elsbetiae_contig8078.17070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5073bp|location=Sequence derived from alignment at L-elsbetiae_contig8078:3916..8988- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8078:3916..8988- >mRNA_L-elsbetiae_contig8078.17070.1 ID=mRNA_L-elsbetiae_contig8078.17070.1|Name=mRNA_L-elsbetiae_contig8078.17070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig8078:3916..8988- (Laminarionema elsbetiae ELsaHSoW15)back to top |