mRNA_L-elsbetiae_contig8077.17069.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8077.17069.1
Unique NamemRNA_L-elsbetiae_contig8077.17069.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8077.17069.1 vs. uniprot
Match: D7FTV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV7_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.410e-117
Identity = 323/515 (62.72%), Postives = 355/515 (68.93%), Query Frame = 1
Query:    1 RSSLEHAYGMAASYGREDSD----SPLRAHQHALAGRGVPESSQEIMHDTQEWLKGVLKDAAESDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSAKTGGALFSHVGAARHLDTERSTAFNPPTAAEGMAXXXXXXXXXXXXXXXXXXXXXXAYPRSPRYTPPVPCRAPPPPAVTFDSVPLTAMPSVAAAHXXXXXXXXXXXXXXXXXXHEAQSTQPRHHTPSVRFRAATTTVAGGLKQAFAHAAELVTVQR----------------GGDNDSRAADGAGSXXXXXXXXXXXXXXXGPVAKRKGSKTKVQGEKELGRGARVAVAQQETPTAEGTGGDAAESATGAV--LLPGKELVKRMKDVSQYIVARSKTAEEAYGDVWEVIMEMADRAASRGCNVPTEDYSSTSVPCYGALVVTPDLATYSSDTFFRFQETLNRGLKHLPMEHDISVEAFHPEAVSEATPLDHRFTRSPFPSLHVCYHGLRGDNDTALHPLAGA 1479
            RSSLEHAYGMAASYGRE+++    S + AHQH LAGRGVPESS EI+  TQEWL  VLKDAA SD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +SA  G  L+S  G    LDTERST+F+PPTAAE   XXXXXXXXXXXXXXXXXXXXXX                    + T  +   TA+P    AH      XXXXXXXXXXXX       PRHHTPSVRFRAATTTVAGG+KQAFAHAAELVTV                  GGD+D+ A+   GS                          + + E  +  G  V     ET   EG GGD   S   A   LLPGKELVKRMK++SQY+VARSKTAEEAY D WEV+MEMADRAASRGC+VPTEDY+S+S PCYGAL+VTPDLATYSSDTF RFQETLNRGLKHLPMEHDISVEAFHPEAVS+A+PLDHRFTRSPFP+LHVCYHGLR +  TAL+P   A
Sbjct:  260 RSSLEHAYGMAASYGREEAEHGVGSSMWAHQHVLAGRGVPESSVEILQATQEWLTEVLKDAAASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAA-VMSAGKGRPLYSRTGTGGGLDTERSTSFSPPTAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTASA---TAVPD---AHLSSESGXXXXXXXXXXXX--XXXXXPRHHTPSVRFRAATTTVAGGIKQAFAHAAELVTVHXXXXXXXXXXXXXXXXDGGDSDAGAS---GSQDISVEAQLL----------------ETREEDNVNGGVAVEELAAET---EGQGGDEEASGKAAEPPLLPGKELVKRMKNISQYVVARSKTAEEAYSDTWEVVMEMADRAASRGCDVPTEDYTSSSAPCYGALLVTPDLATYSSDTFLRFQETLNRGLKHLPMEHDISVEAFHPEAVSDASPLDHRFTRSPFPTLHVCYHGLR-EEGTALNPRVAA 742          
BLAST of mRNA_L-elsbetiae_contig8077.17069.1 vs. uniprot
Match: A0A6H5KW26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW26_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.990e-95
Identity = 174/272 (63.97%), Postives = 197/272 (72.43%), Query Frame = 1
Query:  682 TQPRHHTPSVRFRAATTTVAGGLKQAFAHAAELVTVQRGGDNDSRAADGAGSXXXXXXXXXXXXXXXGPVAKRKGSKTKVQGEKELGRGARVAVAQQETPTAEGTGGDAAESATGAV--LLPGKELVKRMKDVSQYIVARSKTAEEAYGDVWEVIMEMADRAASRGCNVPTEDYSSTSVPCYGALVVTPDLATYSSDTFFRFQ---ETLNRGLKHLPMEHDISVEAFHPEAVSEATPLDHRFTRSPFPSLHVCYHGLRGDNDTALHPLAGAA 1482
            TQPRHHTPSVRFRAATTTVAGG+KQAFA A ELVTV+               XXXX             V   +  + + + E  +  G  V   ++     EG GGD   SA  A   LLPGKELVKRMK++SQYIV RSKTAEEAY D WEV+MEMADRAASRGC+VPTEDY+S+S PCYGAL+VTPD+ATYSSDTF RFQ   ETLNRGLKHLPMEHDISVEAFHPEAVS+A+PLDHRFTRSP+P+LHVCYHGLR +  TAL+P   AA
Sbjct:   46 TQPRHHTPSVRFRAATTTVAGGIKQAFALATELVTVRHHRXXXXXXXXXXXXXXXXDSDAGASGSKDISV---EAQRWETREEDNVNGGVAVEKLKKLAAETEGQGGDEEASAEAAKPPLLPGKELVKRMKNISQYIVTRSKTAEEAYSDTWEVVMEMADRAASRGCDVPTEDYTSSSAPCYGALLVTPDIATYSSDTFLRFQAKVETLNRGLKHLPMEHDISVEAFHPEAVSDASPLDHRFTRSPYPTLHVCYHGLR-EKGTALNPRVAAA 313          
BLAST of mRNA_L-elsbetiae_contig8077.17069.1 vs. uniprot
Match: A0A6H5KUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.370e-7
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 RSSLEHAYGMAASYGREDSD----SPLRAHQHALAGRGVPESSQEIMHDTQ 141
            RSSLEHAYGMAASYGRE+++    S + AHQH LAGR VPESS EI+  TQ
Sbjct:  260 RSSLEHAYGMAASYGREEAEQGAGSSMWAHQHVLAGRRVPESSVEILQATQ 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8077.17069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTV7_ECTSI1.410e-11762.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW26_9PHAE1.990e-9563.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUH9_9PHAE2.370e-768.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8077contigL-elsbetiae_contig8077:260..4712 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1485
Cds size1458
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816892.665233-UTR-L-elsbetiae_contig8077:259..2861622816892.665233-UTR-L-elsbetiae_contig8077:259..286Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8077 260..286 +
1691683892.1718795-UTR-L-elsbetiae_contig8077:259..2861691683892.1718795-UTR-L-elsbetiae_contig8077:259..286Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8077 260..286 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816892.6771798-CDS-L-elsbetiae_contig8077:286..4001622816892.6771798-CDS-L-elsbetiae_contig8077:286..400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 287..400 +
1691683892.1818018-CDS-L-elsbetiae_contig8077:286..4001691683892.1818018-CDS-L-elsbetiae_contig8077:286..400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 287..400 +
1622816892.6890812-CDS-L-elsbetiae_contig8077:1405..16501622816892.6890812-CDS-L-elsbetiae_contig8077:1405..1650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 1406..1650 +
1691683892.1908314-CDS-L-elsbetiae_contig8077:1405..16501691683892.1908314-CDS-L-elsbetiae_contig8077:1405..1650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 1406..1650 +
1622816892.6993132-CDS-L-elsbetiae_contig8077:1962..20681622816892.6993132-CDS-L-elsbetiae_contig8077:1962..2068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 1963..2068 +
1691683892.2003186-CDS-L-elsbetiae_contig8077:1962..20681691683892.2003186-CDS-L-elsbetiae_contig8077:1962..2068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 1963..2068 +
1622816892.7103264-CDS-L-elsbetiae_contig8077:2389..28841622816892.7103264-CDS-L-elsbetiae_contig8077:2389..2884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 2390..2884 +
1691683892.2152414-CDS-L-elsbetiae_contig8077:2389..28841691683892.2152414-CDS-L-elsbetiae_contig8077:2389..2884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 2390..2884 +
1622816892.7229645-CDS-L-elsbetiae_contig8077:2947..30311622816892.7229645-CDS-L-elsbetiae_contig8077:2947..3031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 2948..3031 +
1691683892.2306933-CDS-L-elsbetiae_contig8077:2947..30311691683892.2306933-CDS-L-elsbetiae_contig8077:2947..3031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 2948..3031 +
1622816892.734833-CDS-L-elsbetiae_contig8077:3255..33761622816892.734833-CDS-L-elsbetiae_contig8077:3255..3376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 3256..3376 +
1691683892.246659-CDS-L-elsbetiae_contig8077:3255..33761691683892.246659-CDS-L-elsbetiae_contig8077:3255..3376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 3256..3376 +
1622816892.7453754-CDS-L-elsbetiae_contig8077:3752..38441622816892.7453754-CDS-L-elsbetiae_contig8077:3752..3844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 3753..3844 +
1691683892.268603-CDS-L-elsbetiae_contig8077:3752..38441691683892.268603-CDS-L-elsbetiae_contig8077:3752..3844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 3753..3844 +
1622816892.7560563-CDS-L-elsbetiae_contig8077:4511..47121622816892.7560563-CDS-L-elsbetiae_contig8077:4511..4712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 4512..4712 +
1691683892.277206-CDS-L-elsbetiae_contig8077:4511..47121691683892.277206-CDS-L-elsbetiae_contig8077:4511..4712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8077 4512..4712 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8077.17069.1prot_L-elsbetiae_contig8077.17069.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8077 287..4712 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8077.17069.1

>prot_L-elsbetiae_contig8077.17069.1 ID=prot_L-elsbetiae_contig8077.17069.1|Name=mRNA_L-elsbetiae_contig8077.17069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=486bp
MAASYGREDSDSPLRAHQHALAGRGVPESSQEIMHDTQEWLKGVLKDAAE
SDAAAEAAAAAAAASAATRASRSPPPPPTAATTTTTPGLLSSSPAAALSA
KTGGALFSHVGAARHLDTERSTAFNPPTAAEGMAAAAAAALEEQAAAAAA
AAAAAAAYPRSPRYTPPVPCRAPPPPAVTFDSVPLTAMPSVAAAHAHHHH
DGNSSSSSSSGHNHEAQSTQPRHHTPSVRFRAATTTVAGGLKQAFAHAAE
LVTVQRGGDNDSRAADGAGSSSSGSSGSGSSNSGRGPVAKRKGSKTKVQG
EKELGRGARVAVAQQETPTAEGTGGDAAESATGAVLLPGKELVKRMKDVS
QYIVARSKTAEEAYGDVWEVIMEMADRAASRGCNVPTEDYSSTSVPCYGA
LVVTPDLATYSSDTFFRFQETLNRGLKHLPMEHDISVEAFHPEAVSEATP
LDHRFTRSPFPSLHVCYHGLRGDNDTALHPLAGAAA
back to top

mRNA from alignment at L-elsbetiae_contig8077:260..4712+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8077.17069.1 ID=mRNA_L-elsbetiae_contig8077.17069.1|Name=mRNA_L-elsbetiae_contig8077.17069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4453bp|location=Sequence derived from alignment at L-elsbetiae_contig8077:260..4712+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTCTTCGCTGGAACACGCGTACGGCATGGCGGCGTCGTACGGCCGGGA AGATTCGGACAGCCCCTTGAGGGCCCATCAGCACGCCCTGGCCGGCAGGG GGGTGCCGGAGAGCAGCCAGGAGATCATGCACGATACGCAGGTGGGTGCG CTGTCGTTGTCGTTGTTGTGGCTGGTGGTGGTGGTGGTGGTGTGGTTGGT TGCATACGTAACATCCCGCACGTAGGTGGGCTAGATCTGTGGGCTAGATC TCCGGAGATCCTTATTTTGTTGTTGAACCCGCTGCCGGTTGTTGCCCGCG CGGACTCACCGAAGGTTTTGTGGTCGACTGGTGTCTTAAGGGGGTGCTGA CAACGTTGGTTAAGAGTTTGACACTGAAATCAAGATAATAAGGCCGGGTT GGGCTCACGGCGGGGTTGTTCGCCGCCCGCCCTGTATCCTACACAACCGT TGCCGTGGTTGTCCACGCACACTCGTTCGCACCGTACATATACATACAAG ATCACGACGTCGTGTCCAGGAGACGCGTCGAGGCCCTCTCTTATTTTGGT GTTTCGAAGCCTTACATAGGCTTCCGGCAACAGAGCCCCCAATTCTCAGA AAGAGCCGTGGGGGCAGCGGGGGGGGGGGGGGGGGGTTTTTTGTGTAATT AACTCGCTAAAAAAGGGGAAAAATCCCACCGCCAACCTTTTNNNNNNNNN NCGACGACCGCCAGCAGGGCCAGGAGCAGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGCATTTATCTAGTAATTATCTAGGAAA AAGAGGGAAAAATCCCCCACAGCCACTTTTTCAAACTTGGGGGCCCTGCT GCAGGCAGCCTACCGTAGGTGACACAAGATACCACACCCCCTGGATATAT TTTCACAGCTCTACTCCTCCCCAGCAAGAAGAGCGCCATTGCCGAAAGGG GGTGGCGTTGGAAAGATCTAAGGGAGGGCTGTCCGAAAGTGTGCCGTTTG GTGCTGGCACCCTCTTCGTTACGGAGCAAGGGAGCTCTAAAATTCGGCCC AGGGCGTGTGGTATCTTCTGTCACCTACGGTATATAAGTGCAAACCACGT CTTGTCGCCCCGTTTTCTTTTTTTTTTTTCTCGATTTTTCTCGCAGGAGT GGCTTAAGGGGGTGCTGAAGGACGCGGCAGAGAGCGACGCCGCCGCGGAA GCGGCGGCGGCGGCGGCGGCCGCGTCGGCAGCCACGCGGGCGAGCAGATC ACCCCCACCGCCTCCGACCGCCGCCACCACTACTACCACGCCCGGACTGT TGTCTTCTTCTCCCGCGGCCGCGCTGTCGGCGAAGACTGGCGGGGCCCTG TTCTCGCACGTTGGGGCCGCGAGGCACCTCGACACCGAACGGTGTGTGTG TATGTGTCGTTGTTGTTGGTGGTGGTGGTGATGATTCTCACAAATTCTAG GCAAAATCACGGTGCGTGGCCACAAAAGTGTTGTGTGTGTTGTAGGTTGT TGTTGTTCATAGAGCCGGCAAGAGCCGGCAGGGCTTTCAATACAGTTGTA TAATACATACATATGTGCGTTCGAAAAGTGATGTTTTACGGGGCACCTCA TACTTGTCTGTCATTATGGAATACAGTCTACTGGTAGGTACAGTGCGCAA GTCAGACCTGAATAAATCACTGGGTGAATTTTGTTCCGTGAACTCTGCTT AAGGTCGACGGCCTTTAACCCGCCGACGGCGGCGGAGGGGATGGCCGCAG CGGCGGCGGCGGCTCTGGAAGAGCAGGCCGCGGCGGCTGCAGCGGCGGCT GCAGCGGCGGTGGCCAGCGGTGCGGGCCCGGCCGAGATGTCGCGAGGTAC GTGAACTGTGCGACGATTTCCATACATACATCTGCACATACATGGATACA TAACAGGCAGTCATCGCAGGAGGGAGTCCACCCCTCCCCCTCCTGTGTGA CCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGTATGGGGGCCAGTGGG GCAGACGACGAATAAGCCAGCAACGGAAATAAATAAATAATAAAAAAATA CATTATGTTTCCTAAAGCCATCCTTTGTTTACGTATCGTGCGGGTAGGTA GGTATACATGTACGCGTGTGCTGTCGGCAGGCGGCATATCCTCGCTCACC CCGCTATACCCCCCCTGTTCCCTGCCGCGCCCCCCCCCCCCCCGCCGTGA CATTCGATTCCGTGCCCCTGACAGCAATGCCGTCTGTTGCCGCGGCACAT GCCCACCACCACCACGACGGCAACAGCAGCAGCAGCAGCAGCAGTGGACA CAACCACGAAGCGCAGTCGACGCAGCCGCGACACCACACGCCGAGCGTCC GGTTCCGCGCCGCCACCACCACCGTGGCCGGCGGGCTGAAACAGGCGTTC GCGCACGCGGCGGAACTGGTGACGGTTCAGCGGGGCGGGGATAACGACTC GAGGGCCGCCGACGGTGCCGGCAGCAGCAGCAGTGGCAGCAGCGGTAGCG GCAGCAGTAACAGTGGCAGGGGTCCCGTGGCAAAGCGCAAGGGTTCCAAA ACCAAGGTCCAGGGCGAGAAGGAACTCGGTCGTGGGGCAAGGGTGGCGGT CGCCCAGCAGGAGACGCCGACGGCGGTGGCGCGGACGGCGGTGACGGCGG CGGCGGTGCCGCCGCCTCCACCGCCGTTGGAGATGGAGGAAGGGACCGGG GGCGACGCGGCAGAGTCTGCGACGGGGGCGGTGCTGCTGCCGGGGAAAGA GTTGGTGAAGAGGATGAAAGATGTGAGAGGCGTTCCCGCTTTTTTTCGGG GTCACTGTTCGCCTTCTTCTTCGCTCTCCCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCGCTCATTGCCCCGACCGTCG GTTTCTGTGGCATGCGCTGTGGGCCAACACCCCCTTGAATGCATTTTTGT CTCACGAATCACGCACGGCAAACGCGGCGTGTGCTGGTGCGCGCAGGTCT CCCAGTACATCGTGGCCAGATCGAAGACAGCCGAGGAAGCGTACGGCGAC GTATGGGAGGTGATCATGGAGATGGCGGACAGGGCGGCCTCGAGAGGATG CAACGTGCCCACAGAAGGTAGAACACAATAAAATCATCCGGGTGTTTTGG ACGCGCACTCGGCAGTCTCTAGAGGGTGCCGCGTGTGTGTCCACAGGAGA TTAACACATAAAAAAATAACGTCCGGGTGTTTTTGGACGCATACCTCTCC GTTGAGTCGCTACCGCATCGCGTGTTGTGTGACACCCGCCTGATCGCCGC GTGATGATACTTCGGGGTCGCTGCACGCAGCTGATGTGAGATTGTTCAGT GTTATGTACGTTGTTCGTATTTCGTTTACCATCGACATTTGCGGATATAC TTCTATTGTTCAACCGATACCGCATTGCGTGTATCACTACCCCCCGACCC CGGCATGTTGCGACCCCCCCTCCCTCCCCCCGTGGCATGTTAGACTACTC TTCCACGTCCGTGCCGTGCTATGGCGCGTTGGTGGTGACCCCTGATCTGG CCACCTACAGCTCCGACACTTTCTTCCGCTTTCAGGTGATTTTTTTTCTT TTTTTTTTCTCTCTGGTCATGTCGACGTGTGTGTGTGTGTGTGTGTGCTT TCCCGAGATGGTGTCTGCTCGGTACCCCTGAAACTGTCCCGTCAGTACCA GGGTTCCGCCGGTTCTTCACGGGATTTTTGACCAATCGGGTTGCAGCCAA AATGGGACAGCAGGCGCTTGATATAACCTATAGTTGAAGACCGTGGCGCC CTCTCGAACTTCCGGGATAAACAGTCATATATGTTGTTGATAAATATGTA TCTCCAGGCCCTTCCCCTGCCTAGCGTTGTGTTTTATTGTCTACCGTCTC AGCTGCGAGAAGCATGTCAAACAGCTCCTCTCGTGTCTGCGATAGGGTGG TTTGTTGACATGGAAATGGAGACAAGATGAGTTAAAAACCGGCTGCACCG CTACTTTGATGGGACAGAGGTGCTCTAGCTATTCTTAAACATTTGGCACA GCAACCAACTACCTCTGAGAGCATCAGCAGCAGCGTCGATAACGACAGAA GCCACCACTATTGGCGGCGGAAGGCAGCAGCACAAGGCGTTCACTCTTTC TGCCGCGTTTTAGTCTGGGAACAACGCACCCCTTTCCCGTGTTGAAAACA CCCCCTTCTTTCTATCTGCACTCTGTCCGCCCCCCTCGACCAACCAACAC AGGAAACTCTCAACAGAGGCCTCAAGCACCTCCCGATGGAGCACGACATC TCCGTAGAAGCCTTCCACCCGGAAGCCGTGAGCGAGGCCACCCCGCTCGA CCACCGCTTCACGCGGTCGCCGTTCCCGTCGCTGCACGTCTGCTACCACG GCCTTCGCGGCGACAATGACACGGCGCTTCACCCGCTGGCTGGGGCGGCG GCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8077:260..4712+

>mRNA_L-elsbetiae_contig8077.17069.1 ID=mRNA_L-elsbetiae_contig8077.17069.1|Name=mRNA_L-elsbetiae_contig8077.17069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2916bp|location=Sequence derived from alignment at L-elsbetiae_contig8077:260..4712+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGCGTCGTACGGCCGGGAAGATTCGGACAGCCCCTTGAGGGCCCA
TCAGCACGCCCTGGCCGGCAGGGGGGTGCCGGAGAGCAGCCAGGAGATCA
TGCACGATACGCAGATGGCGGCGTCGTACGGCCGGGAAGATTCGGACAGC
CCCTTGAGGGCCCATCAGCACGCCCTGGCCGGCAGGGGGGTGCCGGAGAG
CAGCCAGGAGATCATGCACGATACGCAGGAGTGGCTTAAGGGGGTGCTGA
AGGACGCGGCAGAGAGCGACGCCGCCGCGGAAGCGGCGGCGGCGGCGGCG
GCCGCGTCGGCAGCCACGCGGGCGAGCAGATCACCCCCACCGCCTCCGAC
CGCCGCCACCACTACTACCACGCCCGGACTGTTGTCTTCTTCTCCCGCGG
CCGCGCTGTCGGCGAAGACTGGCGGGGCCCTGTTCTCGCACGTTGGGGCC
GCGAGGCACCTCGACACCGAACGGAGTGGCTTAAGGGGGTGCTGAAGGAC
GCGGCAGAGAGCGACGCCGCCGCGGAAGCGGCGGCGGCGGCGGCGGCCGC
GTCGGCAGCCACGCGGGCGAGCAGATCACCCCCACCGCCTCCGACCGCCG
CCACCACTACTACCACGCCCGGACTGTTGTCTTCTTCTCCCGCGGCCGCG
CTGTCGGCGAAGACTGGCGGGGCCCTGTTCTCGCACGTTGGGGCCGCGAG
GCACCTCGACACCGAACGGTCGACGGCCTTTAACCCGCCGACGGCGGCGG
AGGGGATGGCCGCAGCGGCGGCGGCGGCTCTGGAAGAGCAGGCCGCGGCG
GCTGCAGCGGCGGCTGCAGCGGCGGTCGACGGCCTTTAACCCGCCGACGG
CGGCGGAGGGGATGGCCGCAGCGGCGGCGGCGGCTCTGGAAGAGCAGGCC
GCGGCGGCTGCAGCGGCGGCTGCAGCGGCGGCGGCATATCCTCGCTCACC
CCGCTATACCCCCCCTGTTCCCTGCCGCGCCCCCCCCCCCCCCGCCGTGA
CATTCGATTCCGTGCCCCTGACAGCAATGCCGTCTGTTGCCGCGGCACAT
GCCCACCACCACCACGACGGCAACAGCAGCAGCAGCAGCAGCAGTGGACA
CAACCACGAAGCGCAGTCGACGCAGCCGCGACACCACACGCCGAGCGTCC
GGTTCCGCGCCGCCACCACCACCGTGGCCGGCGGGCTGAAACAGGCGTTC
GCGCACGCGGCGGAACTGGTGACGGTTCAGCGGGGCGGGGATAACGACTC
GAGGGCCGCCGACGGTGCCGGCAGCAGCAGCAGTGGCAGCAGCGGTAGCG
GCAGCAGTAACAGTGGCAGGGGTCCCGTGGCAAAGCGCAAGGGTTCCAAA
ACCAAGGTCCAGGGCGAGAAGGAACTCGGTCGTGGGGCAAGGGTGGCGGT
CGCCCAGCAGGAGACGCCGACGGCGGCGGCATATCCTCGCTCACCCCGCT
ATACCCCCCCTGTTCCCTGCCGCGCCCCCCCCCCCCCCGCCGTGACATTC
GATTCCGTGCCCCTGACAGCAATGCCGTCTGTTGCCGCGGCACATGCCCA
CCACCACCACGACGGCAACAGCAGCAGCAGCAGCAGCAGTGGACACAACC
ACGAAGCGCAGTCGACGCAGCCGCGACACCACACGCCGAGCGTCCGGTTC
CGCGCCGCCACCACCACCGTGGCCGGCGGGCTGAAACAGGCGTTCGCGCA
CGCGGCGGAACTGGTGACGGTTCAGCGGGGCGGGGATAACGACTCGAGGG
CCGCCGACGGTGCCGGCAGCAGCAGCAGTGGCAGCAGCGGTAGCGGCAGC
AGTAACAGTGGCAGGGGTCCCGTGGCAAAGCGCAAGGGTTCCAAAACCAA
GGTCCAGGGCGAGAAGGAACTCGGTCGTGGGGCAAGGGTGGCGGTCGCCC
AGCAGGAGACGCCGACGGCGGAAGGGACCGGGGGCGACGCGGCAGAGTCT
GCGACGGGGGCGGTGCTGCTGCCGGGGAAAGAGTTGGTGAAGAGGATGAA
AGATGAAGGGACCGGGGGCGACGCGGCAGAGTCTGCGACGGGGGCGGTGC
TGCTGCCGGGGAAAGAGTTGGTGAAGAGGATGAAAGATGTCTCCCAGTAC
ATCGTGGCCAGATCGAAGACAGCCGAGGAAGCGTACGGCGACGTATGGGA
GGTGATCATGGAGATGGCGGACAGGGCGGCCTCGAGAGGATGCAACGTGC
CCACAGAAGGTCTCCCAGTACATCGTGGCCAGATCGAAGACAGCCGAGGA
AGCGTACGGCGACGTATGGGAGGTGATCATGGAGATGGCGGACAGGGCGG
CCTCGAGAGGATGCAACGTGCCCACAGAAGACTACTCTTCCACGTCCGTG
CCGTGCTATGGCGCGTTGGTGGTGACCCCTGATCTGGCCACCTACAGCTC
CGACACTTTCTTCCGCTTTCAGACTACTCTTCCACGTCCGTGCCGTGCTA
TGGCGCGTTGGTGGTGACCCCTGATCTGGCCACCTACAGCTCCGACACTT
TCTTCCGCTTTCAGGAAACTCTCAACAGAGGCCTCAAGCACCTCCCGATG
GAGCACGACATCTCCGTAGAAGCCTTCCACCCGGAAGCCGTGAGCGAGGC
CACCCCGCTCGACCACCGCTTCACGCGGTCGCCGTTCCCGTCGCTGCACG
TCTGCTACCACGGCCTTCGCGGCGACAATGACACGGCGCTTCACCCGCTG
GCTGGGGCGGCGGCGGAAACTCTCAACAGAGGCCTCAAGCACCTCCCGAT
GGAGCACGACATCTCCGTAGAAGCCTTCCACCCGGAAGCCGTGAGCGAGG
CCACCCCGCTCGACCACCGCTTCACGCGGTCGCCGTTCCCGTCGCTGCAC
GTCTGCTACCACGGCCTTCGCGGCGACAATGACACGGCGCTTCACCCGCT
GGCTGGGGCGGCGGCG
back to top