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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 287 |
| Cds size | 210 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816892.2913682-UTR-L-elsbetiae_contig8071:964..1040 | 1622816892.2913682-UTR-L-elsbetiae_contig8071:964..1040 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig8071 965..1040 + |
| 1691683891.9137006-UTR-L-elsbetiae_contig8071:964..1040 | 1691683891.9137006-UTR-L-elsbetiae_contig8071:964..1040 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig8071 965..1040 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816892.304244-CDS-L-elsbetiae_contig8071:1040..1112 | 1622816892.304244-CDS-L-elsbetiae_contig8071:1040..1112 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8071 1041..1112 + |
| 1691683891.9251087-CDS-L-elsbetiae_contig8071:1040..1112 | 1691683891.9251087-CDS-L-elsbetiae_contig8071:1040..1112 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8071 1041..1112 + |
| 1622816892.3165033-CDS-L-elsbetiae_contig8071:3256..3394 | 1622816892.3165033-CDS-L-elsbetiae_contig8071:3256..3394 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8071 3257..3394 + |
| 1691683891.9343-CDS-L-elsbetiae_contig8071:3256..3394 | 1691683891.9343-CDS-L-elsbetiae_contig8071:3256..3394 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8071 3257..3394 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8071.17063.1 >prot_L-elsbetiae_contig8071.17063.1 ID=prot_L-elsbetiae_contig8071.17063.1|Name=mRNA_L-elsbetiae_contig8071.17063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
MGSGASMSAETELSTFKEMQAKFEALKAEGKTDDDIYAELKILYNTSATP
SGDAPAVAPPASSNGDVEKP back to topmRNA from alignment at L-elsbetiae_contig8071:965..3394+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig8071.17063.1 ID=mRNA_L-elsbetiae_contig8071.17063.1|Name=mRNA_L-elsbetiae_contig8071.17063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2430bp|location=Sequence derived from alignment at L-elsbetiae_contig8071:965..3394+ (Laminarionema elsbetiae ELsaHSoW15)
CGACAGAGAAGGTCAATTAAGCAAAATCAAAGGCGGATAATCACTCGACG
AAAGCTTTCACATTTAGCTCTTCATCATGGGATCTGGAGCTTCGATGTCG
GCGGAGACGGAGTTGTCCACGTTCAAGGAGATGCAAGCAAAATTCGAGGC
GAGTCCGGAATGATATTACGAAGACTCTGTCTTCCTGCATTAGCAAAAAC
AAAACACGCACAGCATGTTCCTCAAGAGAGAGCACTTATCTACTGCCAGA
GAATATTTTCGAGCGAGCACTTCAGTTGAATGCGAAGCGCTAGTCTAGCT
AGAACAGGTCTCCATTTGACAACGCGTGTGTTGGCTACAAAGGTTACATG
TGTATCACTTTCTATTGACCAGGGAAGACAGTCAAGAATGAACGGTGATG
TTGCGAACGATCTGCATCATGCATCTACTGAAAAGCATTCGTCATCTGAT
GTGCGGTTCCATGGACGATTCATGTGCTGTAGGTTGGCGACATGGGGTGA
TGCGGCGATACATAGATAGCTAATGACTGGTACCGGCGATTACAACTCAT
TCTCTCTAGTACAACTGCTAGATACACTTTACTTAAACCCTACAATATAT
TTACCTGTGTAGTCTATCTATCTAGTCTATCATGTTCACGCGTGCGTGCG
TCTTGTTTAGCCTATTGGGTGAAACGAGAGCAACATGTCGAAGGGTGGAC
ATAACTTTTCCCGGCTTTTTTTAATTGTTATTTTTTCTTGCGGATAAATA
CCCACGCGTTTACCAGCGCTCTTCGAAATCCCGGGTAGGGGTTCCAGGAG
AGAGCCCAAAGTGACACTTGTTTTTTATAGCGGTTCTTTCCTGCCATCTC
CCACAGAAAATCCGTAGATTTCTCTCCAGCTGCCCTCTCTCGCCGCAAGA
TCGACTTTTGCGCTTTGAAACAAGAACCGATATCAAAATTTCTAAGTCAA
TCCTTGGAGTTGGCTGTCTTCAGGTAGCTCTTACTGCTGGTAGCAGAGCA
GAGAGCAATATATACCACGGTCGGCCGTTTGAATCCTATGTAGCCTGCAC
CGAGCAAACTACATAGTTTCGTGCGTCGGCAGAAGCCAGGGCGTGCACGC
TTGGGGTAGACAGCAGCGAGGATCGGCCATGGAGCGCTTGGGTTCTTTGG
AGACGGAGTCTTCGGCTGAGCACCTCTGATGAGAACCTCCGAGGGACATA
GTCGGAGCACAGTAGGAGCGGTGCACAGTAGATTTCGGTCTGAAGAACTT
CGTGTTTTCAAACCGTCTCAAAACGCCCAATTTTCTGTCAACCTGGTCGG
GTTTTGCTGATCGAAACAACGTACACCCGCCTTGCGAACCAACCAAAACA
GCAGACACGCGAAAATAGCCATAATGCTCCACTTTAAGCAAAGGGGGCTG
AAGACACCCAAACGGACCCCGACCCCCCTAGAACTTGCGAACCTGCACAT
GTTCTCATTGTACTGATTTCAAACAGGAAGAATCAGAGCCAAAAATGATT
CCCCGCAACAAATTGTACGTTGTCCATCCTTAAAACTACACTTGGCTGAC
AAGATAAATGTGGTTCGTGCACAACAATCCAAATATTTCCAGGCACGGAT
GGCAACTTTTCTCTGTACGCAGGTGGATGTTCGGGAATCTGAAAATGCCG
GCAGACGCCATGTCTTCAGGCGCATCTCGTGGAGACTTTTTTTTTCCTTC
CTTCACTTTTCATCGAGCAAACACTTGTCTCACAACTTGTAATATTTTTA
ACCACACGCAAACTAACCTACCTACCGATTTAGAAAAATACGGTGGCAAA
CGACTCCTCTCATGAATGCCCAGATCCGTTTTTTTGTTTTTAGGGAAATC
TAGTTGTCGAGATATCGGGGGGAAATAGTATATAGTCTAGAAGGCCAACT
TGTTTATTTTCTTTGGGAAAACTGACCCACCGAGTTCAAAAAAGGTAGCG
GCAAACGACTCCTCTCATCAATGTACGTGAAATATGGGTGAGGCTCAACT
TCCTATTTTATCGACACTACTGTCGAGCGCAGGGTTTTGTACAGGGTTTA
GTGTGGCATCTACCATTGAGCTACACATAAGTTTGTTAGCTCAACTTCCC
TCTTTCTCTCGGGCCTGAGTCCCTGTTTCTTGTCAGCGGGCGCCAAGTGT
ACAGTCTAGATATTATACGCTGCTCTCCGCGCCTGAATGCGTGCACCCTC
TAACGTAATAAGTGGTCAGAAGTTTAAAGTTTCACGCAACCTTCGTCTTG
CGTGGCGTTTTGGGTTCGGCTTGTTCGGTCATGCAACACCAGGCGTTGAA
GGCGGAAGGCAAGACAGACGACGACATCTATGCCGAGCTTAAAATCTTGT
ACAACACCAGCGCCACCCCCAGTGGTGATGCTCCTGCTGTTGCCCCCCCT
GCTAGTAGCAACGGTGACGTCGAGAAGCCA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig8071:965..3394+ >mRNA_L-elsbetiae_contig8071.17063.1 ID=mRNA_L-elsbetiae_contig8071.17063.1|Name=mRNA_L-elsbetiae_contig8071.17063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=420bp|location=Sequence derived from alignment at L-elsbetiae_contig8071:965..3394+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGATCTGGAGCTTCGATGTCGGCGGAGACGGAGTTGTCCACGTTCAA
GGAGATGCAAGCAAAATTCGAGATGGGATCTGGAGCTTCGATGTCGGCGG
AGACGGAGTTGTCCACGTTCAAGGAGATGCAAGCAAAATTCGAGGCGTTG
AAGGCGGAAGGCAAGACAGACGACGACATCTATGCCGAGCTTAAAATCTT
GTACAACACCAGCGCCACCCCCAGTGGTGATGCTCCTGCTGTTGCCCCCC
CTGCTAGTAGCAACGGTGACGTCGAGAAGCCAGCGTTGAAGGCGGAAGGC
AAGACAGACGACGACATCTATGCCGAGCTTAAAATCTTGTACAACACCAG
CGCCACCCCCAGTGGTGATGCTCCTGCTGTTGCCCCCCCTGCTAGTAGCA
ACGGTGACGTCGAGAAGCCA back to top
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