mRNA_L-elsbetiae_contig807.17060.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: D8LTE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE4_ECTSI) HSP 1 Score: 464 bits (1193), Expect = 6.630e-160 Identity = 235/258 (91.09%), Postives = 249/258 (96.51%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 774 TGK F+VTGGTQGMGL+I+ACIAKAGA+AVTISAR+QDTGEKAVA+L EHTPSC+F+FVPADVA EEDC+RL SEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK +RI RVNAINVGWTLTDNEH LQRVEMGS++WIE+ADK HAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG Sbjct: 33 TGKMFVVTGGTQGMGLVISACIAKAGASAVTISARSQDTGEKAVAQLTEHTPSCRFFFVPADVAKEEDCSRLVSEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKRSRI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 289
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A6H5KWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ8_9PHAE) HSP 1 Score: 333 bits (853), Expect = 4.050e-110 Identity = 168/179 (93.85%), Postives = 173/179 (96.65%), Query Frame = 1 Query: 238 MGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 774 MGCIDGLVNCAAWTARATLDTTTV+VWDRMMNTNVRGPFLLVQAVSKSMRSKG PGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK ARI RVNAINVGWTLTDNEH LQRVEMGS++WIE+ADK HAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG Sbjct: 1 MGCIDGLVNCAAWTARATLDTTTVEVWDRMMNTNVRGPFLLVQAVSKSMRSKGHPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKGARI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 178
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A6V1MI94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MI94_HETAK) HSP 1 Score: 234 bits (597), Expect = 1.550e-69 Identity = 126/256 (49.22%), Postives = 171/256 (66.80%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRP--GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 762 TGK F+VTGG QG+G IA C+A GA V I+ R+++ GEK + + +CQ ++ ADVA E C L A G + GLVN A T R TL++T +D ++ TN++GPF L + +++MR GS+VNISS+A+H G P +S YSV+KAALNA TK+HA EL+ R+ RVNA+ +GWTLTDNEHK+Q VE G D W+E+ D H GR+LRPVD+AA G LLSDA+ M++G ++D HP+ VN Sbjct: 67 TGKNFIVTGGGQGLGRNIAECLAAQGAAGVLITCRSEEQGEKVKSYINSTNTNCQAEWMVADVAAEAQCAALVRRALGRFGALHGLVNAAGLTTRGTLESTDEATFDALLATNLKGPFFLTKHAARAMRDTAGASGGSVVNISSIASHAGAPFISCYSVTKAALNAMTKVHALELQRDRV-RVNALAIGWTLTDNEHKIQLVERGPD-WLEKGDAAHPFGRILRPVDVAAAAGFLLSDAALMISGAVLDQHPDFVN 320
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: R1CSP3_EMIHU (Short chain dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSP3_EMIHU) HSP 1 Score: 213 bits (542), Expect = 5.840e-62 Identity = 132/282 (46.81%), Postives = 167/282 (59.22%), Query Frame = 1 Query: 4 GKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHT---PSCQFYFVPADVATEEDCTRLASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG*AEGLHVSGLVSAAAPSPFSSR 840 G+ +L+TGGTQG+G IA + GA V + ARN + G KAV RL + +FV AD++ + + A MG IDG+VN AA TAR L +TT + WD MM N R PFL+ QA ++ M KG GSIVNISSVA GG P + YSVSKAA +A T+ +A EL I RVN + +GW TDNE LQR G DDW+++AD +GR+LRP D+AATV LLSDAS MMTG +VDLHPE + SG++S A R Sbjct: 17 GRNYLITGGTQGLGFEIATQLKACGAAKVAVIARNAERGTKAVERLQAAAGVQEPFEAFFVEADLSDATGPGKAVALALAAMGAIDGVVNAAATTARGNLASTTAEDWDAMMACNARAPFLITQAATRHMIEKGIRGSIVNISSVAGKGGAPFLMAYSVSKAAASALTRNNAAELAPHGI-RVNCVEMGWCATDNEDALQRSVKG-DDWLQQADASQPLGRILRPADVAATVCFLLSDASLMMTGNVVDLHPE------------YSSGMISRLADEAAGGR 284
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A7S2HYS1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS1_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.150e-61 Identity = 132/255 (51.76%), Postives = 166/255 (65.10%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRL---ASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSM-RSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 753 TG+ F+VTGGTQG+GL IA + GA + + +R+Q GEK L SC FV AD++ ED + + A+EA +G I GLVN AA T R L TTT + +D M NVR PFL+ Q V+K M + + GSIVNI SVAA GG P + YS +KAAL++ TK +A EL I RVN +N+GW LT+NE KLQR G DDW E+AD +GR+LRP D+AATVG LLSDASAMMTG++V LHPE Sbjct: 16 TGRVFVVTGGTQGLGLAIARFLKGNGAAGLVLVSRSQAKGEKVCKELQGDDGSCTVAFVSADLSKAEDASAVVPKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDMQMALNVRAPFLVSQGVAKHMIENNVKGGSIVNICSVAALGGAPFIMAYSAAKAALSSMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRQNSG-DDWAEKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVVGLHPE 268
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A6V2PCJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PCJ6_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.470e-60 Identity = 130/255 (50.98%), Postives = 165/255 (64.71%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLM---GCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSM-RSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 753 +G+ F++TGGTQG+GL IA + GA + + +R+++ GEK L E+T C FV AD+ ED + + ++A M G I GLVN AA T R L TTT + +D M NVR PFL+ Q +K M +K R GSIVNI SVAA GG P + YS SKAAL A TK +A EL I RVN +N+GW LT+NE KLQR G DDW +AD +GR+LRP D+AATVG LLSDASAMMTG+++ LHPE Sbjct: 18 SGRVFVITGGTQGLGLAIARYLKGNGAAGLVLVSRSKEKGEKVCKELEENT--CVVKFVAADLGNTEDASSVIAKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDIQMALNVRAPFLVSQGAAKHMIENKVRGGSIVNICSVAALGGAPFIMAYSASKAALAAMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRKNSG-DDWAVKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVLSLHPE 268
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: K0TJ38_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ38_THAOC) HSP 1 Score: 206 bits (523), Expect = 4.490e-59 Identity = 126/266 (47.37%), Postives = 166/266 (62.41%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPS--CQFYFVPADVATEEDCTRLASEADRLMG-------CIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRP---GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 762 +G+ F+VTGGTQG+GL IA + + GA+ V + +R+ E A+ + +H PS C FV AD+A + + + A + I G+VN AA TAR L +TT D++D + NVRGPFLL QA SK M G P GS+VNI SVAA GG P + YS +K+AL TK +A EL I RVN IN+GWTLT+NEHKLQ ++ W EEADK +GR+LRP D+A++V LLS AS MMTG I+DLHPE+ + Sbjct: 13 SGRFFVVTGGTQGLGLEIAKQLKQCGASGVVLVSRSPSKAEAAIREIGDHCPSSTCHAVFVKADMAVSSEVSSIVPRAVEELAKHCGSPIVITGVVNAAALTARGNLASTTPDMFDSQFSVNVRGPFLLTQAASKHMIEAGVPRGLGSVVNICSVAADGGAPFIMGYSCAKSALVTLTKNNAAELAPKGI-RVNGINMGWTLTENEHKLQSEVHKNERWHEEADKSVPLGRILRPADVASSVLFLLSGASTMMTGAILDLHPEIAS 277
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: I0I718_CALAS (Putative oxidoreductase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I718_CALAS) HSP 1 Score: 203 bits (516), Expect = 1.910e-58 Identity = 116/253 (45.85%), Postives = 154/253 (60.87%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV 759 T +VTGGTQG+G IA A+ A + I RN+ G++ A + E C FVPAD+A+ +DC + AD G IDGLVNCAA T R ++D T ++WDR+M N+R PF L+Q ++ MR +GR GSIVNI S+ AHGG+P ++ YS SK L TK A L A RI RVN INVGW T NE +QR E D+W+E AD + GR+LRP D++ V LLS AMM+G ++D + + Sbjct: 5 TDLIIVVTGGTQGLGEDIARRAAQHHAAGLIICGRNEQKGQRVAAEITES--GCPTVFVPADLASIDDCRTVIRAADERFGRIDGLVNCAASTERGSVDDATPELWDRIMAINLRAPFFLMQEAARVMRREGRGGSIVNIGSINAHGGLPNLTVYSTSKGGLMTLTKNAAVVLGADRI-RVNCINVGWMFTPNEDIVQRAEGRGDNWLEVADAQMPFGRILRPPDVSGLVMWLLSAEGAMMSGAVIDFDHQRI 254
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A7S1APH9_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APH9_NOCSC) HSP 1 Score: 199 bits (507), Expect = 8.340e-57 Identity = 123/253 (48.62%), Postives = 161/253 (63.64%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLMGC-IDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRS-KGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 753 +G ++VTGGTQG+GL IA + GA + + AR + GE AVA L T C +FV D+A A+ + ++G +DGLVN A T R L TTT + +D+ + N R PFLL QA++ ++ K R SIVNISS+AA GG P ++ YS SKAALN T +A EL I RVNAIN+GWT+TDNEH+L + G++ W+ EAD H M RLLRPVD+A TV LLS AS MMTG ++DLHP+ Sbjct: 23 SGGHYIVTGGTQGLGLEIARQLKATGAGKLVLMARTRSRGEAAVAELSNAT--CTAHFVEVDIADAASLQAAAAASFEILGDRVDGLVNAAGTTERGNLMTTTAEGFDKQFDINARAPFLLTQALAVHLKERKLRGASIVNISSLAAKGGAPFITAYSASKAALNVLTMNNAVELAEHGI-RVNAINMGWTVTDNEHELMVKKAGAE-WLTEADAAHPMKRLLRPVDVACTVCFLLSPASTMMTGNVLDLHPD 271
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Match: A0A496R851_9SPIR (Short-chain dehydrogenase n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A496R851_9SPIR) HSP 1 Score: 198 bits (503), Expect = 1.730e-56 Identity = 110/253 (43.48%), Postives = 157/253 (62.06%), Query Frame = 1 Query: 1 TGKTFLVTGGTQGMGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVATEEDCTRLASEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHKLQRVEMGSDDWIEEADKEHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV 759 +G+ ++VTGGTQG+G IA +A GA + I RN + GE+A A + C+F V AD+ EEDC R+ S+A + G I GLVN A T R+ ++ TV+ W+ MMN N R PFLL+Q + M+ KG GSIVNI S AHGG P + YS SK L TK A+ L++ RI RVN + +GW T NEH++Q ++W+E+A+K RLL+P D++ V +LL+D S MMTG+++D + ++ Sbjct: 9 SGRNYIVTGGTQGLGRAIALDLAAQGADGILICGRNAENGERARADIESAGSRCRF--VRADLQFEEDCRRVVSDAVAVFGIIHGLVNAAGLTDRSGIEDATVEHWNLMMNVNARAPFLLIQDTVRHMKEKGIHGSIVNIISDQAHGGSPNLMAYSASKGTLATMTKNIAHALRSDRI-RVNGVLIGWMNTPNEHRIQIASGKPENWLEDAEKSQPFKRLLKPEDVSGFVSYLLNDVSEMMTGSLIDFNQNVI 258 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig807.17060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig807.17060.1 >prot_L-elsbetiae_contig807.17060.1 ID=prot_L-elsbetiae_contig807.17060.1|Name=mRNA_L-elsbetiae_contig807.17060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp MGLIIAACIAKAGATAVTISARNQDTGEKAVARLVEHTPSCQFYFVPADVback to top mRNA from alignment at L-elsbetiae_contig807:454..7024+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig807.17060.1 ID=mRNA_L-elsbetiae_contig807.17060.1|Name=mRNA_L-elsbetiae_contig807.17060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6571bp|location=Sequence derived from alignment at L-elsbetiae_contig807:454..7024+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig807:454..7024+ >mRNA_L-elsbetiae_contig807.17060.1 ID=mRNA_L-elsbetiae_contig807.17060.1|Name=mRNA_L-elsbetiae_contig807.17060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig807:454..7024+ (Laminarionema elsbetiae ELsaHSoW15)back to top |