mRNA_L-elsbetiae_contig8065.17059.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8065.17059.1
Unique NamemRNA_L-elsbetiae_contig8065.17059.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: D7FNG4_ECTSI (5-oxoprolinase (ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG4_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 5.040e-141
Identity = 230/280 (82.14%), Postives = 238/280 (85.00%), Query Frame = 3
Query:  135 C*LEG*PSDMC---VFEQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGG-----RTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPDPAASMDVEDGG-------DVEDPDRKSRREAEMRLGGSVSGHRLGQEQA 929
            C L G  +D+    + ++GCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGAR GGDGV RSMT RKPLTVSVLSERR+FRPWGLAGG PAERGLNFLRF GGG     R+VSLG KNTV V AGDRLTILTPGGGGHGTP                    D+EDPDRKSRREAEMRLGGSVSGHRLGQEQA
Sbjct: 1038 CLLPGDAADVPLNQISDRGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARRGGDGVSRSMTIRKPLTVSVLSERRSFRPWGLAGGQPAERGLNFLRFRGGGGGNSGRSVSLGGKNTVKVNAGDRLTILTPGGGGHGTPXXXXXXXXXXXXXXXXXXXXDLEDPDRKSRREAEMRLGGSVSGHRLGQEQA 1317          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: UPI0003F0CF60 (5-oxoprolinase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0CF60)

HSP 1 Score: 295 bits (755), Expect = 6.050e-96
Identity = 152/252 (60.32%), Postives = 181/252 (71.83%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPDPAASMDVEDGGDVEDPDRKSRREAEMRLGGSVSGHRLGQEQA 929
             QGCL PV+  IPEGCLLNP   AAVVGGNVLTSQR+ DV+LK F  CAASQGCMNN+TFGD+ +GYYET++GG+GAGPTW+G SGVHTHMTNTRITDPEILERRYP++L  F L  GSGG G   GGDGV R M FR+PLT+SVL+ERRAF+P+G+ GG P +RG N+L  H  G  VSLG K ++NV  GD   +LTPGGGG+G P   + +   +   DV        +       GSV  +RL QEQA
Sbjct:    9 NQGCLNPVKAIIPEGCLLNPCDKAAVVGGNVLTSQRIVDVVLKAFSVCAASQGCMNNVTFGDQNVGYYETVSGGSGAGPTWNGRSGVHTHMTNTRITDPEILERRYPIVLQCFKLNLGSGGQGQFRGGDGVQREMLFRRPLTLSVLTERRAFQPYGMNGGEPGQRGKNYL-IHKNGHVVSLGGKTSLNVKPGDVFQLLTPGGGGYGAPKKDSDTQSEKGKHDVVASHFYHEK-------GSVHAYRLAQEQA 252          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: A0A1B6J8E1_9HEMI (Hydantoinase_B domain-containing protein (Fragment) n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6J8E1_9HEMI)

HSP 1 Score: 288 bits (738), Expect = 2.040e-93
Identity = 139/206 (67.48%), Postives = 159/206 (77.18%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHG 791
             QGCL PV+  IPEGCLL+PS  AAVVGGNV TSQR+ DV+ K F+ CAASQGCMNN+TFG E  GYYET+AGGAGAGPTW G SGVHTHMTNTRITDPE+LE RYPVIL  F LR GSGGGGA  GGDGVVR + FR P+T+S+L+ERR F P+GL GGLP  +GLN L     GR ++LG+K  +NV  GD   + TPGGGG G
Sbjct:   12 NQGCLNPVKTVIPEGCLLDPSDDAAVVGGNVQTSQRIVDVVFKAFKTCAASQGCMNNVTFGQEGWGYYETVAGGAGAGPTWHGHSGVHTHMTNTRITDPEVLEHRYPVILQQFSLRPGSGGGGAYRGGDGVVRELLFRAPMTLSILTERRVFAPYGLEGGLPGAKGLN-LMLKADGRIINLGAKTAINVGPGDVFQMFTPGGGGWG 216          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: H3H7H5_PHYRM (Hydantoinase_B domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7H5_PHYRM)

HSP 1 Score: 291 bits (745), Expect = 6.140e-93
Identity = 146/215 (67.91%), Postives = 169/215 (78.60%), Query Frame = 3
Query:  153 PSDMCVFEQGCLAPVEIRIP-EGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMG-YYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHG 791
            P +     QGCL P+E+R P EG +LNPS  AAVVGGNVLTSQR+TDVILK F ACAASQGCMNNLTFG   +G YYETIAGGAGAGP+W G SG+HTHMTNTRITDPEILE+R+PV+L +F LR GSGG G   GGDGVVR + F + +TVS+LSERRAF+P+GL GG P  RG+N L   GG RTV+LG KNTV+V  G+ LT+ TPGGGG G
Sbjct:  141 PGEDLPLNQGCLTPIEVRFPSEGSILNPSANAAVVGGNVLTSQRITDVILKAFGACAASQGCMNNLTFGSATLGGYYETIAGGAGAGPSWHGRSGIHTHMTNTRITDPEILEKRFPVLLRAFHLREGSGGEGKFRGGDGVVRQLEFLEGMTVSILSERRAFQPYGLEGGAPGARGINLLERRGG-RTVNLGGKNTVDVLPGEVLTLFTPGGGGFG 354          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: A0A7S4ETD8_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETD8_CHRCT)

HSP 1 Score: 287 bits (735), Expect = 7.340e-93
Identity = 142/206 (68.93%), Postives = 163/206 (79.13%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHG 791
             QGCLAPV ++IP   LL+PS TAAVVGGNVLTSQRV DV+L+ F ACAASQGCMNNL+FGDE  GYYETIAGGAGAGPTW G SGVHTHMTNTRITDPEILERRYPV+L  F LR+GSGG G   GGDGVVR + FRKP+ VS+LSERRA RP+G+AGG    +G N +   GG  T+SLG K ++ V AG R  +L+PGGG +G
Sbjct:   45 NQGCLAPVTVKIPHNSLLHPSATAAVVGGNVLTSQRVVDVVLRAFGACAASQGCMNNLSFGDETFGYYETIAGGAGAGPTWHGRSGVHTHMTNTRITDPEILERRYPVMLREFSLRKGSGGHGRWHGGDGVVRDIEFRKPMQVSILSERRATRPYGMAGGGDGAKGQNLIIMPGG-HTISLGGKASIAVEAGTRFRLLSPGGGAYG 249          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: A0A835ZBL8_9STRA (Hydantoinase B/oxoprolinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL8_9STRA)

HSP 1 Score: 310 bits (793), Expect = 2.490e-92
Identity = 167/253 (66.01%), Postives = 185/253 (73.12%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPDPAASMDVEDGGDVEDPDRKSRREAEMR-LGGSVSGHRLGQEQA 929
             QGCL PV I IP+G LL+P   AAVVGGNVLTSQRVTDVILK FRACAASQGCMNNLT GD  MGYYETIAGGAGAGP W GCSGVHTHMTNTRITDPEILERRYP++L  F LR  SGG G   GGDGV R + FRK L VS+LSERRAF+P+GL+GG P  RG N LR+  G R +SLG KNT++V  GDRLTILTPGGGG+G+P  P          DVE    K    A +    GSV  ++L QEQA
Sbjct:  968 NQGCLTPVNIIIPQGSLLSPCAEAAVVGGNVLTSQRVTDVILKAFRACAASQGCMNNLTLGDATMGYYETIAGGAGAGPGWHGCSGVHTHMTNTRITDPEILERRYPLLLLKFALRPDSGGTGQYKGGDGVERELMFRKDLVVSILSERRAFQPYGLSGGGPGARGKNLLRYRTG-RVISLGGKNTISVKEGDRLTILTPGGGGYGSPDSP----------DVEAVATKLAAAAPVEHSAGSVLLYQLAQEQA 1209          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: A0A1S3K6G8_LINUN (5-oxoprolinase-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K6G8_LINUN)

HSP 1 Score: 286 bits (731), Expect = 3.610e-92
Identity = 143/209 (68.42%), Postives = 163/209 (77.99%), Query Frame = 3
Query:  177 QGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPD 803
            +GCL P++I IP+GCLL+PS  AAVVGGNV TSQRV DVILK F  CAASQG MNNLTFGD   GYYET+AGGAGAGP W G  GVHTHMTNTRITDPEILE+RYPV+LN F L  GSGG G   GGDGV+R + FRK LT+S+L+ERR FRP+GL GG   +RGLN L  H   R V+LGSK +V V+AGDR  +LTPGGGG+G P D
Sbjct:   11 KGCLNPIQIVIPKGCLLDPSNDAAVVGGNVETSQRVVDVILKAFAVCAASQGSMNNLTFGDGDSGYYETVAGGAGAGPGWHGRGGVHTHMTNTRITDPEILEKRYPVVLNCFSLNHGSGGRGKYSGGDGVMRELLFRKRLTLSILTERRVFRPYGLFGGEAGQRGLNLL-IHADDRVVNLGSKCSVTVSAGDRFRLLTPGGGGYGDPGD 218          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: UPI0009A25F0A (5-oxoprolinase-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A25F0A)

HSP 1 Score: 285 bits (730), Expect = 4.040e-92
Identity = 153/256 (59.77%), Postives = 178/256 (69.53%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPDPAASMDVEDGGDVEDPDRKSRREAEMRLG------GSVSGHRLGQE 923
             QGCLAPV+I IP+G +L+PS  AAVVGGNVLTSQRV DVI K F  CAASQGCMNN+TFG+E +GYYET+AGG+GAGP W G  GVHTHMTNTRITDPEILE+RYPVIL  F L RGSGG G  PGGDGV+R + FR+ + +SVL+ERRAF P+GL GG P  RGLN L     GRT+SLG+K +V V+AGD   + TPGGGG G   D  A+ +          D      A  + G      GSV  HRL QE
Sbjct:    9 NQGCLAPVKIIIPKGSILDPSVDAAVVGGNVLTSQRVVDVIFKAFEVCAASQGCMNNITFGNERVGYYETVAGGSGAGPHWDGRGGVHTHMTNTRITDPEILEKRYPVILKRFELNRGSGGKGRHPGGDGVIRELLFRERVVLSVLTERRAFCPYGLNGGKPGTRGLNLL-IREDGRTISLGAKTSVAVSAGDTFLLHTPGGGGWGWDEDVTANFE----------DLPRLGPANQKAGVCFPERGSVFEHRLSQE 253          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: A0A7S3H7L0_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7L0_9STRA)

HSP 1 Score: 310 bits (794), Expect = 4.840e-92
Identity = 149/207 (71.98%), Postives = 169/207 (81.64%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGT 794
             QGCL P+EI+IP  C+LNPS  AAVVGGNVLTSQRVTDV+L+ F+ACAASQGCMNNLTFGD  MGYYETIAGGAGAGPTW GCS VHTHMTNTRITDPEILE+RYP+IL  F LR GSGG G   GG+GVVR + F KPL VS+LSERRAFRP+GLAGG    RG+N LRF    R +SLG KNT++V+ GD L I +PGGGG+G+
Sbjct: 1079 NQGCLNPIEIKIPPQCILNPSAGAAVVGGNVLTSQRVTDVVLRAFKACAASQGCMNNLTFGDATMGYYETIAGGAGAGPTWHGCSAVHTHMTNTRITDPEILEKRYPIILRQFALREGSGGKGQFNGGEGVVRELQFTKPLVVSILSERRAFRPYGLAGGEDGHRGMNLLRFAQDQRVISLGGKNTISVSTGDCLLIHSPGGGGYGS 1285          
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Match: UPI0015AEE255 (5-oxoprolinase-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AEE255)

HSP 1 Score: 286 bits (733), Expect = 1.620e-91
Identity = 143/212 (67.45%), Postives = 167/212 (78.77%), Query Frame = 3
Query:  174 EQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFRACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRITDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVLSERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLTILTPGGGGHGTPPDPA 809
             QGCLAPV++ IP+GC+L PS TAAVVGGNVLTSQRV DVI K F+ CAASQGCMNN+TFGDE +GYYET+AGGAGAGP W G SGVHTHMTNTRITDPEILERRYPVIL SF L  G+GG G   GGDGV+R + FRK  T+SVL+ERR F P+GL GG   ++GLN +  H G   ++LG+KN+V+V AGD L + TPGGGG+G   D A
Sbjct:  119 NQGCLAPVKVLIPKGCILCPSDTAAVVGGNVLTSQRVVDVIFKAFQTCAASQGCMNNITFGDETVGYYETVAGGAGAGPHWHGRSGVHTHMTNTRITDPEILERRYPVILESFHLNPGTGGCGKYKGGDGVLRKIMFRKAFTLSVLTERRVFAPYGLKGGEDGKKGLNLVIRHDG-CIINLGAKNSVDVYAGDALLLQTPGGGGYGYAEDEA 329          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8065.17059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG4_ECTSI5.040e-14182.145-oxoprolinase (ATP-hydrolysing) 5-oxoprolinase (A... [more]
UPI0003F0CF606.050e-9660.325-oxoprolinase-like n=1 Tax=Saccoglossus kowalevsk... [more]
A0A1B6J8E1_9HEMI2.040e-9367.48Hydantoinase_B domain-containing protein (Fragment... [more]
H3H7H5_PHYRM6.140e-9367.91Hydantoinase_B domain-containing protein n=1 Tax=P... [more]
A0A7S4ETD8_CHRCT7.340e-9368.93Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A835ZBL8_9STRA2.490e-9266.01Hydantoinase B/oxoprolinase-domain-containing prot... [more]
A0A1S3K6G8_LINUN3.610e-9268.425-oxoprolinase-like n=1 Tax=Lingula unguis TaxID=7... [more]
UPI0009A25F0A4.040e-9259.775-oxoprolinase-like n=1 Tax=Rhincodon typus TaxID=... [more]
A0A7S3H7L0_9STRA4.840e-9271.98Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
UPI0015AEE2551.620e-9167.455-oxoprolinase-like n=1 Tax=Stegodyphus dumicola T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8065contigL-elsbetiae_contig8065:4391..7043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.4
Seed ortholog evalue2.8e-121
Seed eggNOG ortholog2880.D7FNG4
KEGG rclassRC00553
KEGG koko:K01469
KEGG ReactionR00251
KEGG Pathwayko00480,map00480
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0017168,GO:0034641,GO:0042221,GO:0043603,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051716,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:1901564,GO:1990748
EggNOG free text desc.5-oxoprolinase (ATP-hydrolyzing) activity
EggNOG OGsCOG0145@1,KOG1939@2759
EC3.5.2.9
COG Functional cat.EQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1126
Cds size771
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8065.17059.1prot_L-elsbetiae_contig8065.17059.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8065 4552..6849 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.871503-UTR-L-elsbetiae_contig8065:4390..45511622816891.871503-UTR-L-elsbetiae_contig8065:4390..4551Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8065 4391..4551 +
1691683891.6162305-UTR-L-elsbetiae_contig8065:4390..45511691683891.6162305-UTR-L-elsbetiae_contig8065:4390..4551Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8065 4391..4551 +
1622816891.9327445-UTR-L-elsbetiae_contig8065:6849..70431622816891.9327445-UTR-L-elsbetiae_contig8065:6849..7043Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8065 6850..7043 +
1691683891.6709194-UTR-L-elsbetiae_contig8065:6849..70431691683891.6709194-UTR-L-elsbetiae_contig8065:6849..7043Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8065 6850..7043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.8827832-CDS-L-elsbetiae_contig8065:4551..47601622816891.8827832-CDS-L-elsbetiae_contig8065:4551..4760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 4552..4760 +
1691683891.630316-CDS-L-elsbetiae_contig8065:4551..47601691683891.630316-CDS-L-elsbetiae_contig8065:4551..4760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 4552..4760 +
1622816891.8927011-CDS-L-elsbetiae_contig8065:5243..53601622816891.8927011-CDS-L-elsbetiae_contig8065:5243..5360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 5244..5360 +
1691683891.63995-CDS-L-elsbetiae_contig8065:5243..53601691683891.63995-CDS-L-elsbetiae_contig8065:5243..5360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 5244..5360 +
1622816891.904239-CDS-L-elsbetiae_contig8065:5655..58391622816891.904239-CDS-L-elsbetiae_contig8065:5655..5839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 5656..5839 +
1691683891.6497343-CDS-L-elsbetiae_contig8065:5655..58391691683891.6497343-CDS-L-elsbetiae_contig8065:5655..5839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 5656..5839 +
1622816891.9172997-CDS-L-elsbetiae_contig8065:6588..68491622816891.9172997-CDS-L-elsbetiae_contig8065:6588..6849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 6589..6849 +
1691683891.6604102-CDS-L-elsbetiae_contig8065:6588..68491691683891.6604102-CDS-L-elsbetiae_contig8065:6588..6849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8065 6589..6849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8065.17059.1

>prot_L-elsbetiae_contig8065.17059.1 ID=prot_L-elsbetiae_contig8065.17059.1|Name=mRNA_L-elsbetiae_contig8065.17059.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MCVFEQGCLAPVEIRIPEGCLLNPSPTAAVVGGNVLTSQRVTDVILKCFR
ACAASQGCMNNLTFGDEAMGYYETIAGGAGAGPTWSGCSGVHTHMTNTRI
TDPEILERRYPVILNSFGLRRGSGGGGARPGGDGVVRSMTFRKPLTVSVL
SERRAFRPWGLAGGLPAERGLNFLRFHGGGRTVSLGSKNTVNVTAGDRLT
ILTPGGGGHGTPPDPAASMDVEDGGDVEDPDRKSRREAEMRLGGSVSGHR
LGQEQA*
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mRNA from alignment at L-elsbetiae_contig8065:4391..7043+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8065.17059.1 ID=mRNA_L-elsbetiae_contig8065.17059.1|Name=mRNA_L-elsbetiae_contig8065.17059.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2653bp|location=Sequence derived from alignment at L-elsbetiae_contig8065:4391..7043+ (Laminarionema elsbetiae ELsaHSoW15)
ATCTGAAAACCCAACAACTACAACTACAACGTGCCAGCCTACATGCAATT ATGATTTTTCTACATGCTTGCACAAAGCGAAACTTCTGAAAGTAGAGATA CAGACTACGTATCTACTTGATTTGATTTGAGGGTTGTTGACTTGAGGGTT GACCGTCCGATATGTGTGTATTCGAGCAGGGATGCCTTGCTCCGGTGGAG ATTCGCATCCCCGAGGGGTGCCTCCTCAACCCCTCGCCAACGGCGGCGGT GGTGGGGGGGAACGTGCTGACGTCTCAGCGGGTCACGGACGTCATCCTCA AGTGCTTCCGGGCGTGCGCGGCGAGCCAGGGCTGCATGAACAACCTCACC TTCGGAGATGAAGCCATGGGGTGAGTACGCAGAACGCGCATCACGCTGCG CATCTGGTTTTCTATGGCTTATGTATGGTTTGACGAACGAGTAGATACGT CTGTTCTCTACGAATGGGTACTGCTGTACATGGTATGTAAGTACATGGGG AAAATGCGAAACTGTCTGTGCGAGTGGGTACGTTAACCAGGAAGGAGAAA TCGTGGATGGGTGTTTGATTGCGATCGTGGATGTTTGTACACATGCGAGG CGTGCGTGGCCAAAAAGCTTGGCACGAACATGAATCAACCCCCCCTCGTT TTCCTCGGGAAAAATGAGGAAACGGGACGTCTCTGTCTCTCTCTGTCTCT CTCTGTCTTTCTCTCTCTCTCTCTCTCTCTTTGTCTCTGTCTGTCTGTCT CTCTCTCCATGTATTTTTTTATGTGTACACATCTTTATGTAGTTGTACCA TGTCTGTATAACATGATATGGCACGTGCTGTTTTTCTGCATAAATATCCC CAGGTACTACGAGACCATAGCGGGCGGGGCGGGCGCCGGGCCCACGTGGT CCGGCTGCAGCGGAGTGCACACACACATGACCAACACGCGCATCACTGAT CCGGAGATACTCGAGCGAAGGTACATATTGTATATGGGGCAGTTTGTGAT TCGGACGTTCGTGCGTGTGTGCGCGTGCGGGGTGAGTGCGGGTCTCAATC GGCATGCATGTCATGAGGCTGTGATGCTGTTCGGCTGACACATAAGACTG CCGCTGTGCATAATCTACAGGAACGCCGACCCCCGTCCCGAAACCACCCA TCATCACATGGTTTTGTTTTTTGCCGTATGCACAGACTCTGCTACATTAG ATGTAGAATAAAAAACAAAAGAGCACGAATGGTTTGTGAACTGAATTTTC ATTTTTTCCACCCAGGTACCCCGTCATCCTGAACTCGTTCGGCCTGCGGC GCGGCTCCGGCGGCGGCGGCGCCAGGCCCGGCGGCGACGGCGTCGTGCGC TCCATGACCTTCCGGAAGCCCTTGACGGTCAGCGTGCTGTCGGAGCGGCG CGCCTTCCGGCCCTGGGGGCTGGCCGGAGGGCTCCCGGCGGAGAGAGGGG TAAGCGAGCGAGCGATGTGACAAGCTTAATATTACAGCACGTGTGTACAT GCTGGATGTATTGTACGTGTGCGGTGTGTGCATCTATCTGCCTTGCATGT GTGCACATCGTCTATATAAACACGTGTGGGATTGGATGTATCCAACCCAT CTGCCTTGCAAGTTTTTTTGTTTTTTAGCCTTGCACGCGTGTACATGGTC TATACGGTCTGCGTATACGTGTGCGATGTTGTATGCATCTATTTGTGCCT TGTTCATCCGCTGTGCTGCTGTGTATTTATCCATCTGTGTTGTCCAAGCA ACAAGCTATTTATCACATACTTCTGCAACATACACGTGCGATCCGTCTAC ATATGTTTTTATGTACTACTTTCGTAGTAAGTTATCTTACCGCTAATTTT AGTGACTGACGGACGGCAATTTCAACAGCAGGGAAGACAAAGAAAGAGTA CCCAGCAGGTGGTGTATCTATCGTATGTACAAATTACAGCCTTTTTTACT CCTGCCGGCGTCATGACGGCGAGTTGACGGGTTCCAGATAGATATATGAC ATCGGGGGCTCCGCCGCTTGGTGCCTATTTTCGTGTTTTCCTCACTGCCA AAAGCGAGGCGAGCTGTTTGCCCCCCCCCCCCCCTCCGGTCCTCCTCGGA CCCCCTCACCCCTCCCTGCCTCACCGCTCGCTCTGTTCTTGGTGTCCCCC GGCTCTCCTCCGCACAAACAAACGCGGCATGTGCAACAAACTTACCAGCT CAACTTCTTACGCTTCCACGGCGGCGGCCGAACGGTTAGCCTCGGCAGCA AGAACACCGTCAACGTGACCGCGGGCGACCGCCTCACCATCCTCACCCCC GGGGGCGGGGGCCACGGCACCCCGCCCGACCCTGCTGCGTCCATGGACGT CGAGGATGGCGGAGACGTGGAGGACCCCGACCGGAAGTCCAGGCGGGAGG CCGAGATGCGGCTCGGAGGTAGCGTTTCCGGCCACCGCCTCGGCCAGGAG CAGGCCTGAGCGAATGAAGGGCGATGTGCGGCGCGATGTGGTGCGGTGCG AGCACGCTGCTTAGATCTGAGCGTGCTCCTTATAGTGCCACTGCTGCTGC TGCTGCTGCTGCTGCTCCTGCTGCCGTTATGTGTGCTGTGCGGCGGCCGT GTCTCTTTTCTGTACGGTACAGAGAAATAGGGTTGTGCTGTCTGATGTTT TGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8065:4391..7043+

>mRNA_L-elsbetiae_contig8065.17059.1 ID=mRNA_L-elsbetiae_contig8065.17059.1|Name=mRNA_L-elsbetiae_contig8065.17059.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig8065:4391..7043+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTGTATTCGAGCAGGGATGCCTTGCTCCGGTGGAGATTCGCATCCC
CGAGGGGTGCCTCCTCAACCCCTCGCCAACGGCGGCGGTGGTGGGGGGGA
ACGTGCTGACGTCTCAGCGGGTCACGGACGTCATCCTCAAGTGCTTCCGG
GCGTGCGCGGCGAGCCAGGGCTGCATGAACAACCTCACCTTCGGAGATGA
AGCCATGGGATGTGTGTATTCGAGCAGGGATGCCTTGCTCCGGTGGAGAT
TCGCATCCCCGAGGGGTGCCTCCTCAACCCCTCGCCAACGGCGGCGGTGG
TGGGGGGGAACGTGCTGACGTCTCAGCGGGTCACGGACGTCATCCTCAAG
TGCTTCCGGGCGTGCGCGGCGAGCCAGGGCTGCATGAACAACCTCACCTT
CGGAGATGAAGCCATGGGGTACTACGAGACCATAGCGGGCGGGGCGGGCG
CCGGGCCCACGTGGTCCGGCTGCAGCGGAGTGCACACACACATGACCAAC
ACGCGCATCACTGATCCGGAGATACTCGAGCGAAGGTACTACGAGACCAT
AGCGGGCGGGGCGGGCGCCGGGCCCACGTGGTCCGGCTGCAGCGGAGTGC
ACACACACATGACCAACACGCGCATCACTGATCCGGAGATACTCGAGCGA
AGGTACCCCGTCATCCTGAACTCGTTCGGCCTGCGGCGCGGCTCCGGCGG
CGGCGGCGCCAGGCCCGGCGGCGACGGCGTCGTGCGCTCCATGACCTTCC
GGAAGCCCTTGACGGTCAGCGTGCTGTCGGAGCGGCGCGCCTTCCGGCCC
TGGGGGCTGGCCGGAGGGCTCCCGGCGGAGAGAGGGGTACCCCGTCATCC
TGAACTCGTTCGGCCTGCGGCGCGGCTCCGGCGGCGGCGGCGCCAGGCCC
GGCGGCGACGGCGTCGTGCGCTCCATGACCTTCCGGAAGCCCTTGACGGT
CAGCGTGCTGTCGGAGCGGCGCGCCTTCCGGCCCTGGGGGCTGGCCGGAG
GGCTCCCGGCGGAGAGAGGGCTCAACTTCTTACGCTTCCACGGCGGCGGC
CGAACGGTTAGCCTCGGCAGCAAGAACACCGTCAACGTGACCGCGGGCGA
CCGCCTCACCATCCTCACCCCCGGGGGCGGGGGCCACGGCACCCCGCCCG
ACCCTGCTGCGTCCATGGACGTCGAGGATGGCGGAGACGTGGAGGACCCC
GACCGGAAGTCCAGGCGGGAGGCCGAGATGCGGCTCGGAGGTAGCGTTTC
CGGCCACCGCCTCGGCCAGGAGCAGGCCTGACTCAACTTCTTACGCTTCC
ACGGCGGCGGCCGAACGGTTAGCCTCGGCAGCAAGAACACCGTCAACGTG
ACCGCGGGCGACCGCCTCACCATCCTCACCCCCGGGGGCGGGGGCCACGG
CACCCCGCCCGACCCTGCTGCGTCCATGGACGTCGAGGATGGCGGAGACG
TGGAGGACCCCGACCGGAAGTCCAGGCGGGAGGCCGAGATGCGGCTCGGA
GGTAGCGTTTCCGGCCACCGCCTCGGCCAGGAGCAGGCCTGA
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