mRNA_L-elsbetiae_contig8063.17058.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 4.620e-145 Identity = 226/366 (61.75%), Postives = 271/366 (74.04%), Query Frame = 2 Query: 329 MRRYSSFEEFASEQQSAKSRSNETLPVPFVTSPRGGPEYSRSIPLLIITGVQ---KGGTQNLRSHLLTHPQLSGYPGKEAHFFDSSLFQTATQDTIEWPGDSHDDEQPSPRVVGEILSAYADRAMEAVSLQMRPSDRDIMAGVDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQNRPELFAEGARYDKMLKDEEHFREWYRPHNQRLFKLLGYEMPWE 1417 ++RY SFE +A+EQ ++ N LPVP V P GPE SRSIPL II G Q KGGTQNLRSHLLTHP LSG KEAHFFD F + + EW GD + GE+LSAYADRAMEAV P RD MA V+S+P+Y F+PLAPYRMKMVLP ARLV++LRDPTERYFSHLRM MCWT+ ++++ +EKR +T+FH PG K+YLE+ EASY PYT LCRGE+A + DL +CW+ + TH PLHRGLYADQLERWFRV+ R QI+V+ES EMF +FTGTL KVA H GLP H +EY+S HQH+S CE+N PELFAEG RY KML+D+ +EWYRPHN+RL++LLG EMPWE Sbjct: 176 LKRYESFEAYATEQSAS---GNAILPVPIVRPPGKGPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDPKSRHEWRGDGRGGAGLNSSAAGEVLSAYADRAMEAVD----PRKRDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPG--RVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPWE 532
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 9.580e-128 Identity = 208/334 (62.28%), Postives = 246/334 (73.65%), Query Frame = 2 Query: 329 MRRYSSFEEFASEQQSAKSRSNETLPVPFVTSPRGGPEYSRSIPLLIITGVQKGGTQNLRSHLLTHPQLSGYPGKEAHFFDSSLFQT-ATQDTIEWPGDSHDDEQPSPRVVGEILSAYADRAMEAVSLQMRPSDRDIMAGVDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQNRPELFAEGARYDK 1327 +RRY SFE +A+EQ ++ N LPVP V P GPE SRSIPL II G QKGGTQNLRSHLLTHP LSG KEAHFFD F + + EWPGD +P GE+LSAYADRAM+AV PS RD MA V+SSP+Y+F PLAPYRM+MVLP ARLV++LRDPTERYFSHLRM MC T+ G++++ +E+RL T+FH PG K+YLEQ EASY PYT LCRGE A + DL +CW+ + TH PLHRGLY DQLERW RV+ R QI+VVES EMF DFTGTL++VA H GLP HDF Y+S HQH+S CE++ PELFAEG RY + Sbjct: 234 LRRYESFEAYATEQSAS---GNAILPVPIVRPPGKGPEASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVD----PSKRDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPG--RVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDFSYDSRHQHASAPCERHHPELFAEGGRYSR 558
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 291 bits (745), Expect = 3.220e-86 Identity = 168/348 (48.28%), Postives = 221/348 (63.51%), Query Frame = 2 Query: 311 GGGQRLMRRYSSFEEFASEQQSAKSRSNETLPVPFVTSPRGGPEYSRSIPLLIITGVQKGGTQNLRSHLLTHPQLSGYPGKEAHFFDSSLFQTATQDTIEWPGDSHDDEQPSPRVVGEILSAYADRAMEAVSLQMRPSDRDIMAG------VDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQ-----NRPELFAEGARY 1321 GGG L+++Y+SF ++A E S S++ LP+P V G SIPL+ I GVQKGGT NLR +LLTHP ++G P E HFFD W GD + E SP +G ILS YA +E + +P+ +A V+SSP YI P+APYRM+MVLPRA+LVV+LRDPT+RYFS LRM MC T+P + S+E+++ T FH PG + K Y++++EA+Y PY CRGE ATS DL C++ + TH+PLHRGLYADQLERWFRV+ + QI+V++S EMF +FT T+ VA AGLP H+FEY D AC N+P+ FA+G RY Sbjct: 92 GGG--LLKQYTSFAKYALE----SSNSSDPLPLPLVAPI--GERSLLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGMPN-EVHFFDQD--PDIYPKLGHWQGDGREKEL-SPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPG--QAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEFEY--DKHEFKGACRDKIRYHNQPDFFADGGRY 423
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.720e-78 Identity = 130/228 (57.02%), Postives = 162/228 (71.05%), Query Frame = 2 Query: 746 VDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQ----NRPELFAEGARYDKMLKDEEHFREWYRPHNQRLFKLLGYEMPWE 1417 V+SSP YIF+PLAPYRM MV P ARLV++LRDPT+RYFS LRMTMC K Q++E V++ T+FH+PG + Y++ EA+Y PYT LCRGE AT+ DL+ C+R HHPL RGLYADQLERWFRVF + QI++V+S M +D G L VA H GLP DF+ + QHS+ C P+ F E RYDKML++E+ FREWYRPHN+RLFKLLG M W+ Sbjct: 14 VESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQENQATWFHSPG--DAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRAQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMWD 239
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE) HSP 1 Score: 246 bits (629), Expect = 1.810e-72 Identity = 122/223 (54.71%), Postives = 152/223 (68.16%), Query Frame = 2 Query: 761 VYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCW----TKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQNRPELFAEGARYDKMLKDEEHFREWYRPHNQRLFKLLGYEMPWE 1417 +Y+F+PLAPYRMKMV P ARLVV+L+DPT RYFSH RMTMC +KP S V RLR F H PG YL + Y LCRG A GDL +C+ + +PL RGLYADQLERWF VF R QI+V++S E+++DF TL + A H GLP HDF YNSD QHS+ AC++NRP+ F E RY KML+ E+ FR+WYRPHN+RL+ L+G + W+ Sbjct: 1 MYVFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTS---VNYRLRAF-HAPG--RAAGYLNRGTDKVERYAPLCRGVNAEPGDLAKCFMAINGQNPLLRGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKENRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDFKWD 217
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.700e-71 Identity = 151/370 (40.81%), Postives = 196/370 (52.97%), Query Frame = 2 Query: 317 GQRLMRRYSSFEEFASEQQSAKSRSNETLPVPFVTSPRGGPEYSRSIPLLIITGVQKGGTQNLRSHLLTHPQLSGYPGKEAHFFDSSLFQTATQDTI-EWPGDSHDDEQPS--PRVVGEILSAYADRAMEAVSLQMRPSDRDIMAGVDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQIMVVESGEMFKDFTGTLHKVAHHAGLPSHDFEYNSDHQHSSNACEQNRPELFAEGARYDKMLKDEEHFREWYRPHNQRLFKLLGYEMPWE 1417 G+ +R Y+SF +A+E S E LPVP VT P G S+PL I GVQKGGTQNLRSHLL HP LSG PG EAHFFD + T ++ EWPG++ D + GE+L Y++ M + + + VDSSP+YIF+PLAPYRMKMV P ARLVV+L+DPT R + LR F D K+ +QLERWF VF R QI+V++S E+++DF TL + A H GLP HDF Y+SD QH + AC+ NRP+ F E RY KML+ E+ FR+WYRPHN+RL+ L+G ++ W+ Sbjct: 79 GESFVRHYNSFAAYAAEM----LNSTEPLPVPVVT-PNDGRRPPMSLPLGTIIGVQKGGTQNLRSHLLQHPLLSGVPGTEAHFFDRN---PDTYPSLGEWPGNTGDARRAKLPASAAGEVLELYSNATMRTIGAPDELEEAGVTVTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR-------------------KIAVFLRGF----------------------------------SDRKR---------------QPNQLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHGTGACKDNRPQFFGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDLKWD 372
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5JLY7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY7_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.590e-61 Identity = 108/172 (62.79%), Postives = 126/172 (73.26%), Query Frame = 1 Query: 1558 SCFGTANTRPQALQIQLGFLDSGKAGRCQRVRARVRLVSLNITPPPEEPDATKRRKHPLGSDAGPHYAPDTLHDCNHGIECSRKFTPIDSGRQLKGVCLTVHEQSFAHKIFLHNMLNAMKFDRFRVEVVLNNEIENKTINRKIVASLVKRVRGHDIDRLKVCMTYVWFCGQC 2073 +CFG AN R +ALQIQLGF++ K+ A +S N+TPP EEP ATKRR+HP GSDAGP+YAPDTLHDCNHGI+C + + IDS +QL GVCLTVHE + A K +MLNAMKFDRF VVL NE EN+ INRK VA LV+RV GH DRLKVCM VWFCG+C Sbjct: 14 ACFGAANARAKALQIQLGFMNPQKSAN--NGFAEEFGLSFNVTPPAEEPGATKRRRHPWGSDAGPYYAPDTLHDCNHGIDCRQSYGWIDSCKQLSGVCLTVHEHNHAEKKKFLHMLNAMKFDRFAFMVVLINETENEAINRKTVAGLVQRVLGHSSDRLKVCMVEVWFCGRC 183
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5KKU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU6_9PHAE) HSP 1 Score: 206 bits (525), Expect = 7.630e-52 Identity = 106/174 (60.92%), Postives = 123/174 (70.69%), Query Frame = 1 Query: 1558 SCFGTANTRPQALQIQLGFLDSGKA--GRCQRVRARVRLVSLNITPPPEEPDATKRRKHPLGSDAGPHYAPDTLHDCNHGIECSRKFTPIDSGRQLKGVCLTVHEQSFAHKIFLHNMLNAMKFDRFRVEVVLNNEIENKTINRKIVASLVKRVRGHDIDRLKVCMTYVWFCGQC 2073 +CFG AN R +ALQIQLG ++ K+ G+ +S N+TPP EEP ATKRR+HPLGSDAGP+YAPDTL+DCNHGIEC + F IDS RQL GVCLTVHE + A K +MLN MKFDRF V L NE EN INRK V + VKRV GH +RLKVCM VWFCG+C Sbjct: 712 ACFGAANARAKALQIQLGLMNPEKSTDGKVAEFG-----LSFNVTPPVEEPGATKRRRHPLGSDAGPYYAPDTLNDCNHGIECRQAFGWIDSCRQLSGVCLTVHEHNHAKKKKFLHMLNVMKFDRFAFMVGLINETENGVINRKTVGNEVKRVLGHSSERLKVCMAEVWFCGRC 880
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE) HSP 1 Score: 171 bits (433), Expect = 6.570e-46 Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 707 LQMRPSDRDIMAGVDSSPVYIFHPLAPYRMKMVLPRARLVVLLRDPTERYFSHLRMTMCWTKPGQSWESVEKRLRTFFHNPGPEETKKYLEQSEASYTPYTALCRGEKATSGDLKQCWRYLQTHHPLHRGLYADQLERWFRVFGREQI 1150 +Q+R + V+SSP YIF+PLAPYRM MV P ARLV++LRDPT+RYFS LRMTMC K Q++E V++ +FH+PG + Y++ +EA+Y PYT LCRGEKAT+ DL++C R + HHPL RGLYADQLERWFRVF + Q+ Sbjct: 1 MQVRSNAMPGKVTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQTFEGVKEAA--WFHSPG--DAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSRAQRRHHPLFRGLYADQLERWFRVFDKSQV 144
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Match: A0A6H5JTF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF9_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.590e-45 Identity = 86/172 (50.00%), Postives = 114/172 (66.28%), Query Frame = 1 Query: 1558 SCFGTANTRPQALQIQLGFLDSGKAGRCQRVRARVRLVSLNITPPPEEPDATKRRKHPLGSDAGPHYAPDTLHDCNHGIECSRKFTPIDSGRQLKGVCLTVHEQSFAHKIFLHNMLNAMKFDRFRVEVVLNNEIENKTINRKIVASLVKRVRGHDIDRLKVCMTYVWFCGQC 2073 +CFG+A R +ALQIQ+ GK+ + L S +I P E+P AT RR H LGS+AGP+Y PDTLHDCNHG +C +K+ ID+ QL GV L HEQ+ A K +MLN MKFDRF V L NE EN+ + R+ VA++VKRVRGH ++++++C VWFCG+C Sbjct: 33 ACFGSAVQRTKALQIQVAHHQPGKSADINGIVEEYGL-SFDIQPLEEDPTATVRRTHALGSNAGPYYGPDTLHDCNHGDDCRQKYGGIDTCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFTFMVTLINETENEAMKRRSVANMVKRVRGHGLEKVQICQAEVWFCGRC 203 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8063.17058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8063.17058.1 >prot_L-elsbetiae_contig8063.17058.1 ID=prot_L-elsbetiae_contig8063.17058.1|Name=mRNA_L-elsbetiae_contig8063.17058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=465bp MTRGYRCPQQQRQHQQNPRLSSEGPVATCTSSPPPIPSSGDGGTPLRAASback to top mRNA from alignment at L-elsbetiae_contig8063:902..7686+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8063.17058.1 ID=mRNA_L-elsbetiae_contig8063.17058.1|Name=mRNA_L-elsbetiae_contig8063.17058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6785bp|location=Sequence derived from alignment at L-elsbetiae_contig8063:902..7686+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8063:902..7686+ >mRNA_L-elsbetiae_contig8063.17058.1 ID=mRNA_L-elsbetiae_contig8063.17058.1|Name=mRNA_L-elsbetiae_contig8063.17058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2790bp|location=Sequence derived from alignment at L-elsbetiae_contig8063:902..7686+ (Laminarionema elsbetiae ELsaHSoW15)back to top |