mRNA_L-elsbetiae_contig8060.17055.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8060.17055.1
Unique NamemRNA_L-elsbetiae_contig8060.17055.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.820e-125
Identity = 224/318 (70.44%), Postives = 255/318 (80.19%), Query Frame = 2 
Query:    5 DMWVHLEYSDTRDGRGAGGKWSMLQAYILFQKALEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVALAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAPAGSS-PFALVRPVWDRLVRSARSGDSXXXXXXXXXXXXXXXXXXXXXXXGDPGREQIGAGEXXXXXXXXXVESRGGRRNRRSGIGGVVDAVRELGGDPESMARRYRRLAAEQGDSEARCDIGDHLYRQAKAKGGVPPGVGWLP-WAK 952
            DMW+H EYSDTRDGRGAGGK+ MLQAY+LF +ALEMGK +G+PQT AALR+GSMF +G VP+LG+N TEA +YYQESADNGGMDA++VLA+LHL G KGALE SC TAA LY+KYA+L IK+ ALAHG++TFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLD+SMAAA  G+S P +LVR  WD LV        XXXXXXXX               G P  ++ G+G XXXXXXXXX+  R GRR RRSG+GGV DAVR++GGDPE+MARRYRRLAAEQGDSEARCDI DHLYRQAK  G V PG GWLP WA+
Sbjct:  581 DMWLHGEYSDTRDGRGAGGKYPMLQAYLLFTQALEMGKKFGEPQTIAALRIGSMFQHGLVPYLGYNTTEALSYYQESADNGGMDAILVLADLHLAGFKGALEKSCKTAAGLYQKYANLCIKDGALAHGRLTFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDRSMAAAAPGTSWPSSLVRRAWDSLVGDGXXXXXXXXXXXXXDIGPSGGDERVEDASGWP--DEGGSGXXXXXXXXXXM--RRGRRRRRSGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKDMGAVAPGTGWLPAWAR 894
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A6H5J774_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J774_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.000e-16
Identity = 78/176 (44.32%), Postives = 92/176 (52.27%), Query Frame = 2 
Query:  299 GALETSCDTAASLYKKYADLGIKEVALAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAPAGSS-PFALVRPVWDRLVRSARSGDSXXXXXXXXXXXXXXXXXXXXXXXGDPGREQIGAGEXXXXXXXXXVESRGGRRNRRSGIGGVVDAVRELGGDPESMAR 823
            GALE SC  AA LY+K A+L IK+ ALA G++TFEQGQ                         LLD+SMAAAPAG+S P +LVR  W+ LV        XXXX                   G P  E+   G XXXXXXXXX           SG+GGV DAVR++GGDPE+MAR
Sbjct:   19 GALENSCKKAAGLYQKCANLCIKDGALARGRLTFEQGQ-------------------------LLDRSMAAAPAGTSWPSSLVRRAWESLVGDGXXXXXXXXXADSGPSGGDERVKDAMAS-GWPDEERSAGGSXXXXXXXXXXXX------XXSGVGGVADAVRQMGGDPEAMAR 162
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A8K0NK14_9HYPO (Uncharacterized protein n=1 Tax=Claviceps africana TaxID=83212 RepID=A0A8K0NK14_9HYPO)

HSP 1 Score: 60.8 bits (146), Expect = 1.880e-6
Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 2 
Query:   50 GAGGKWSMLQAYILFQKA---------LEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLD----KSMAAAPAGSSP 532
            G GGK ++ +A  LFQ A         +E+G+LY D      LR+                  A  Y++ +A  G ++A   LAE    G+    E +C  A   YK  A+     V+  A     ++ G Y  AF+ YL+AAEQG +  Q ++A++LD    KS A+   G  P
Sbjct:  428 GLGGKENVKRASELFQTAAAADYAPAQVEIGRLYLDQGEPEDLRV------------------ANDYFELAARYGNIEAYYYLAETSYHGV--GREKTCGLALGYYKSVAEKAEPLVSSWADANEAYDSGDYDVAFLEYLMAAEQGYERAQTNVAYMLDVTHSKSFASRWLGGGP 582
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A024S8V6_HYPJR (Putative ubiquitin-protein ligase Sel1/Ubx2 n=5 Tax=Trichoderma TaxID=5543 RepID=A0A024S8V6_HYPJR)

HSP 1 Score: 60.1 bits (144), Expect = 3.280e-6
Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 2 
Query:  104 LEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            ++MG+LY D   T  +R+                  A  Y++ +A  G ++A   LAEL   GL    E  C  A S YK  A+     V+  A     +E G +  AF+HYL+AAEQG ++ Q ++A+LLD   +  P
Sbjct:  448 VQMGQLYLDQGGTEDVRI------------------ANNYFELAARYGNIEANYYLAELVFHGL--GREKLCSMALSYYKSVAEKAEPLVSSWADANDAYEAGDHDLAFLHYLLAAEQGYEKAQTNVAYLLDTLRSKLP 566
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A166P126_9HYPO (Tetratricopeptide-like helical n=1 Tax=Moelleriella libera RCEF 2490 TaxID=1081109 RepID=A0A166P126_9HYPO)

HSP 1 Score: 60.1 bits (144), Expect = 3.330e-6
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 2 
Query:   50 GAGGKWSMLQAYILFQKA---------LEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            G GGK ++ +A  LFQ A         +E+G+LY D      LR+ + F                  ++ +A  G ++A   LAE+   G+    E +C  A   YK  A+     V+  A     ++ G Y+ AF+ YL+AAEQG +  Q ++A++LD S +  P
Sbjct:  425 GWGGKENVKRASELFQFAAAADYAPAQVELGRLYLDQGDEEDLRVANNF------------------FELAARYGNIEAHYYLAEMLYHGV--GREKACSMALGYYKNVAEKAEPLVSSWADANDAYDSGDYEVAFLEYLMAAEQGYERAQNNVAYMLDMSQSQTP 570
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: M1VZP3_CLAP2 (Related to HRD3-involved in degradation of Hmg2p n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1VZP3_CLAP2)

HSP 1 Score: 60.1 bits (144), Expect = 3.350e-6
Identity = 49/159 (30.82%), Postives = 74/159 (46.54%), Query Frame = 2 
Query:   50 GAGGKWSMLQAYILFQKA---------LEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLD 496
            G GGK ++ +A  LFQ A         +E+G+LY D      LR+                  A  Y++ +A  G ++A   LAE+   G+    E SC  A   YK  A+     V+  A     ++ G Y  AF+ YL+AAEQG +  Q ++A++LD
Sbjct:  429 GFGGKENIKRASELFQTAAAADYAPAQVEIGRLYLDQGDPEDLRV------------------ANDYFELAARYGNIEAYYYLAEMSYHGV--GREKSCGLALRYYKNVAEKAEPLVSSWADANEAYDSGDYDVAFLEYLMAAEQGYERAQNNVAYMLD 567
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: UPI0018EAE759 (sel1 repeat family protein n=1 Tax=Pseudomonas sp. ASV14 TaxID=243969 RepID=UPI0018EAE759)

HSP 1 Score: 55.8 bits (133), Expect = 5.700e-6
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 2 
Query:  212 AQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            A  +++ +A  G +++   L E+  FG+    E  C  A S YK  A+     V+  A     +E G Y  AF+ YL+AAEQG ++GQ ++A++LD   A  P
Sbjct:   19 ANNHFELAARYGNIESYYYLGEMVNFGV--GRERQCSLALSYYKSVAERAEPFVSSWAESNDAYEAGNYDLAFLGYLMAAEQGYEKGQNNVAFMLDAKQATLP 119
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A2T3AQM2_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3AQM2_AMORE)

HSP 1 Score: 59.3 bits (142), Expect = 6.290e-6
Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 2 
Query:  206 TEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVA-LAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            T A  Y++ +A  G ++A   LAEL   G+    + SC  A + YK  A+     ++  A     +E G Y+ AF+ YL+AAEQG ++ QA++A++LD+  +  P
Sbjct:  745 TVASRYFEFAARYGHIEAYYYLAELIDQGI--GRDRSCGLATAYYKNVAEKAEPLLSSFAEANQAYEDGDYELAFIDYLLAAEQGYEKAQANVAYMLDQQKSKLP 847
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A086T821_ACRC1 (Uncharacterized protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086T821_ACRC1)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-5
Identity = 43/139 (30.94%), Postives = 66/139 (47.48%), Query Frame = 2 
Query:  104 LEMGKLYGDPQTTAALRLGSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            +EMGKL  D  T   LR+                  A  Y++ ++  G ++A   LAE+   G+    E  C  A + YK  A+     VA  A     +  G ++ AF+HYL+AAEQG ++ Q ++A+LLD   +  P
Sbjct:  458 VEMGKLRLDQGTAEDLRI------------------ANNYFELASRYGNIEANYYLAEMVHHGV--GREKLCPVALNYYKNVAEKAEPMVASWAEANEAYNSGDHEAAFLHYLLAAEQGYEKAQTNVAYLLDSDHSKLP 576
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BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Match: A0A0M8N2D2_9HYPO (Protein sel-1-like protein 1 n=1 Tax=Escovopsis weberi TaxID=150374 RepID=A0A0M8N2D2_9HYPO)

HSP 1 Score: 58.2 bits (139), Expect = 1.370e-5
Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 2 
Query:  212 AQAYYQESADNGGMDALIVLAELHLFGLKGALETSCDTAASLYKKYADLGIKEVAL-AHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAP 517
            A  Y++ +   G ++A   LAEL   GL    E  C+TAA+ YK  A+     V+  A     +E G Y  AF+ YL+AAEQG +  Q ++A++LD   +  P
Sbjct:  474 ANNYFELAVRYGHIEASYYLAELIYHGL--GRERHCNTAANYYKNVAEKAEPLVSSWADANDAYESGDYDLAFLEYLLAAEQGYERAQTNVAYMLDSLRSKMP 574
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8060.17055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LMU4_ECTSI3.820e-12570.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J774_9PHAE6.000e-1644.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K0NK14_9HYPO1.880e-630.29Uncharacterized protein n=1 Tax=Claviceps africana... [more]
A0A024S8V6_HYPJR3.280e-632.37Putative ubiquitin-protein ligase Sel1/Ubx2 n=5 Ta... [more]
A0A166P126_9HYPO3.330e-629.52Tetratricopeptide-like helical n=1 Tax=Moelleriell... [more]
M1VZP3_CLAP23.350e-630.82Related to HRD3-involved in degradation of Hmg2p n... [more]
UPI0018EAE7595.700e-633.98sel1 repeat family protein n=1 Tax=Pseudomonas sp.... [more]
A0A2T3AQM2_AMORE6.290e-634.29Uncharacterized protein n=1 Tax=Amorphotheca resin... [more]
A0A086T821_ACRC11.040e-530.94Uncharacterized protein n=1 Tax=Acremonium chrysog... [more]
A0A0M8N2D2_9HYPO1.370e-535.92Protein sel-1-like protein 1 n=1 Tax=Escovopsis we... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8060contigL-elsbetiae_contig8060:3264..7795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score65.1
Seed ortholog evalue7.4e-08
Seed eggNOG ortholog698440.XP_007297635.1
Preferred nameHRD3
KEGG koko:K14023,ko:K14026
KEGG Pathwayko04141,map04141
KEGG ModuleM00403
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000153,GO:0000835,GO:0000836,GO:0000838,GO:0000839,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0030970,GO:0031974,GO:0031984,GO:0032527,GO:0032991,GO:0033036,GO:0033554,GO:0034099,GO:0034613,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0098796,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902494,GO:1903513,GO:1990234
EggNOG free text desc.Sel1-like repeats.
EggNOG OGs20VFR@147548,38DKP@33154,3NYAN@4751,3QNXD@4890,COG0790@1,KOG1188@1,KOG1188@2759,KOG1550@2759
COG Functional cat.MOT
Best tax levelLeotiomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-02_003670.2
Exons6
Model size1044
Cds size1035
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.470723-CDS-L-elsbetiae_contig8060:3263..34381622816891.470723-CDS-L-elsbetiae_contig8060:3263..3438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 3264..3438 -
1691683891.2776792-CDS-L-elsbetiae_contig8060:3263..34381691683891.2776792-CDS-L-elsbetiae_contig8060:3263..3438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 3264..3438 -
1622816891.4812489-CDS-L-elsbetiae_contig8060:3820..42751622816891.4812489-CDS-L-elsbetiae_contig8060:3820..4275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 3821..4275 -
1691683891.2889485-CDS-L-elsbetiae_contig8060:3820..42751691683891.2889485-CDS-L-elsbetiae_contig8060:3820..4275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 3821..4275 -
1622816891.4921951-CDS-L-elsbetiae_contig8060:5162..52751622816891.4921951-CDS-L-elsbetiae_contig8060:5162..5275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 5163..5275 -
1691683891.2980497-CDS-L-elsbetiae_contig8060:5162..52751691683891.2980497-CDS-L-elsbetiae_contig8060:5162..5275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 5163..5275 -
1622816891.5043507-CDS-L-elsbetiae_contig8060:6080..61471622816891.5043507-CDS-L-elsbetiae_contig8060:6080..6147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 6081..6147 -
1691683891.3072944-CDS-L-elsbetiae_contig8060:6080..61471691683891.3072944-CDS-L-elsbetiae_contig8060:6080..6147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 6081..6147 -
1622816891.5172474-CDS-L-elsbetiae_contig8060:6884..70101622816891.5172474-CDS-L-elsbetiae_contig8060:6884..7010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 6885..7010 -
1691683891.3208728-CDS-L-elsbetiae_contig8060:6884..70101691683891.3208728-CDS-L-elsbetiae_contig8060:6884..7010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 6885..7010 -
1622816891.5280018-CDS-L-elsbetiae_contig8060:7689..77881622816891.5280018-CDS-L-elsbetiae_contig8060:7689..7788Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 7690..7788 -
1691683891.3388088-CDS-L-elsbetiae_contig8060:7689..77881691683891.3388088-CDS-L-elsbetiae_contig8060:7689..7788Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8060 7690..7788 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.5380642-UTR-L-elsbetiae_contig8060:7788..77951622816891.5380642-UTR-L-elsbetiae_contig8060:7788..7795Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8060 7789..7795 -
1691683891.3541644-UTR-L-elsbetiae_contig8060:7788..77951691683891.3541644-UTR-L-elsbetiae_contig8060:7788..7795Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8060 7789..7795 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8060.17055.1prot_L-elsbetiae_contig8060.17055.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8060 3264..7788 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8060.17055.1

>prot_L-elsbetiae_contig8060.17055.1 ID=prot_L-elsbetiae_contig8060.17055.1|Name=mRNA_L-elsbetiae_contig8060.17055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
MWVHLEYSDTRDGRGAGGKWSMLQAYILFQKALEMGKLYGDPQTTAALRL
GSMFHYGWVPFLGHNATEAQAYYQESADNGGMDALIVLAELHLFGLKGAL
ETSCDTAASLYKKYADLGIKEVALAHGKITFEQGQYQEAFVHYLIAAEQG
NKEGQASLAWLLDKSMAAAPAGSSPFALVRPVWDRLVRSARSGDSSSSSG
SDGGGGGGSSESGSAGGTGDPGREQIGAGEGADADADADVESRGGRRNRR
SGIGGVVDAVRELGGDPESMARRYRRLAAEQGDSEARCDIGDHLYRQAKA
KGGVPPGVGWLPWAKPETSDSAHKGAGMGGGSSSSSSSDGGSKVG
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mRNA from alignment at L-elsbetiae_contig8060:3264..7795-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8060.17055.1 ID=mRNA_L-elsbetiae_contig8060.17055.1|Name=mRNA_L-elsbetiae_contig8060.17055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4532bp|location=Sequence derived from alignment at L-elsbetiae_contig8060:3264..7795- (Laminarionema elsbetiae ELsaHSoW15)
TGGAGACATGTGGGTACACCTGGAGTATTCGGACACGCGGGACGGCAGGG
GGGCGGGGGGGAAATGGAGTATGCTGCAGGCCTACATCTTGTTCCAGAAG
GCGCTGGTGGGTCCGGGTTTGTGCCCTCCTCACTATTTAGTGGCGAGGGG
CAGGGGCAGGGACAGGGCGGGGGTGGTATAGGCTTCCTGCAGCAGGGCCC
CCCAATTCCGAAAAAGTGGCACCGTGGGGAATTTTTCACTCTATTTCCTA
GATAAATACCCCCCCCTCCCCGCTGTGCCCCCCCAGCTCTTGTTTAGAAT
TGGGGACTGGCTCTATTGCAGGAAGAAAGCCTATGCTGTGTACTACTGTG
TACCTGCAGCTGCAGAGGCATACAGCCGAACGGGCGCGGAGCGGATATTT
TTTTGCTGTTTTGGGTTGTTGTTGCCCAGGAAAGGTCGCGTTGGGCTCTC
GCGCCTGCCTGCGCGGCGTATGCGTGCATGCGTTTATGTTGCGAGAGCAC
GCGGTGGGAAACTCCTCCCCTCTTCTATTAGCGTGTTACGCTTGCCCTGC
CCGCGCGTGCCCTGAGCAGCTTTGGCACGTCTTGCGTGGCGCGCGCGCGC
GCGTGTGTGTGTGTGTGTGTGTGCGTGCTCGATTGCGAGACTTAGATCTT
TGCGAACGTAGAGGGTATTTATGTGGGGTACACGGACGGACTCAAAAGCA
GCAGCCAGGTTATTTTTTTCATTTCACTCGATTCGCTCAACTCACTCACC
GCTGTTCGCCTTCTTCATGGCGTGACCCCCCGCAGGAGATGGGCAAGCTG
TACGGCGATCCGCAGACAACCGCGGCGCTGCGGCTGGGCAGCATGTTCCA
CTATGGCTGGGTGCCGTTCTTGGGCCACAACGCCACGGAGGCGCAGGCGT
ACTACCAAGAGGTGAGGGGGGGGGGGGATGCTTGGTCGGGTTCGAAGTCT
AGGTGGGGGTAGTTTTTTCCGTCGCGCAGCACCAGGTACTTCGTATGTAT
GTGTGCAACTGGTTGGACTGAAATAACCCGGTTTTGAACTTCAGTGGGCG
ATCGGATTGGCCGAATGGCGGTATGTACGTTATGTGTGGGTTTGTTTTGG
TGGATTCAAGGTGCTGTTCTGCTGTGTGGGGGCTTTGCTCCGATAAACGT
GTCCACCGCAAGCTATGTGCATGCGCATGCTGAAGTCAGGCACGGACGAA
AGCAAGGTTGTTTTTCTGTGATTCCGTCTTGTCGCCAGCTTGATAGCCCT
CGTTACGGGTGCAGGGTCTCCTCCTCTGCTGTGCTCTGCCGCTACCTTCA
CGCTTCAGCGTGTGCTCGTGTGCTGTTTCATGTTTGCGCTTCGTTTTGGT
GTTTTTCTCGGACTATAAAGGTCTCTCGTGCGGATAAAGCACGCGGATAA
AACGTGTCAATACTGCGCTTCTGGGAGAACGAAGTAGGTCCATCCTCGCC
GTCCCCTTTTTTTATTGTGCCAAACGCGCCCTTCTCCGTTGTTGTGCGTC
TCAAGTCTCTCGCTTGGTTGTCCGCGTTTGTTCATTTTTTTCGCTGTCTC
CTCTCTTTTTGCCGCCGTCGCCGCCGCCGCCGCGGCCGCCATCGTCGTCA
TATTCTCCCTCCTCCATTTCCATCTTTCTCGTTCTTCGGTGAATGAAGTC
CGCGGACAACGGCGGAATGGACGCCCTCATAGTCCTCGCAGAGCTCCACC
TGTTCGGGCTCAAAGGTATTTATTTTATTTTTTCCCTCTCATTATTGGCT
TGAATATTCGCCGTCTGCCCCACTGGCCCTCTTCCTCCACCACGACTAGC
TAGACGACCCAACCGGGGTCACACGCATACATACGACGTTGCCGCTGTCA
CCATTCGCTGAGAGGACAGCATAAAGAACTGCGGCTGAACACAGCACAGT
ATATAAGTGGAACTCGTGGAGGAGCAGACCCTCCTCCCCTCAAGAAACAA
TTGTTTATGAGAAGACAGCGGCGGGCGCTTGTTGCGTTGTCGTGGTGTGT
GTCTCGTATTGCCCCCCTGAACAAAGTAAATCATCCCGGGGAGGGTGAGT
GCCGTCTTATTTTTTGGGAAATTCTGGGGTCGGTTCGTGGTTGCTTTTCT
GTTTCCGTGTGCGGTTGGGGACGGGACTGCCTTCGCGAGAAAAAACGGGG
AATATTGATTTATATGTGAAATAGAGTGGTAGGGGTTCCGTAACCCTAAC
CCTAACCACAGACCCCCCAAACATTCGCCGATTCCATACTTTATCCCATA
TGTTTCGCCGACAAAAAACCTGCGTAGACTACCGTGGGGACGGGTTTGCA
TTCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTTCAGATGTTTTGATGCATCCTCTCTGTCGCGATCGAT
CTTGATCGTTTAGCAGGAGATGTGGTGGTCATTCAGGGAATCATCGTTCG
TCGATCGATTCGTGTGCCCCTCTGTCTTATCTGTGTTGTACATACATACA
TACATACATGCATGCAACAGGGGCGCTGGAGACTTCGTGCGACACGGCGG
CCAGCCTGTACAAGAAGTACGCCGACCTCGGCATCAAGGAGGTTGCGTTG
GCTCACGGAAAAATCACCTTCGAGCAGGGGCAGGTGAGGGGAGGCCCCGC
GACAGCACCGCACCGCATCGCACCGCACCGCACCGCACCGCGGTAGCGGT
ATAAAGTACTGTAGGTGACACAAGATACCACACCCCCTGGACAGATTTCC
AAAGCTCGATTCCTCCCCAGCAAGAAGAGCGCCACTGCCGAAAGGGGTGG
CGTTGGAAAGATCTAGTCGAGAGCTGTCCAAAAATGTGTCGTTTGGTGCT
GGCACCCTCTTCGTTACGGGGTAATGGAGCTCTAAAAGTCGGTCCAGGGG
GTGTGGTATCTTGTGTCACCTACGATACGACCTACTGCTCTGCCGCTTCT
TTGAACGAGCGTTGGTGGGGGGCTCACAAAGCGAGCTGAAAAATCTTCCC
AAAACATCTTCCCCAAAAATCTTTGGTGGTGGTATAGTCTAACCCCGTAA
CCGCGGCGAATTGATGCTCCGGGGCACACCCAACCCGGCCCTTTATAAAT
TCGCACAGTCGGCTCTTGGGCGCCTACATGAGCTTCTATCGTCCGAGGCG
GTAGACTGCTGCAGGGTAGAGTGCGTGGGCAGGCTACGATCGTATATACA
AGCAATGTTCGGTGGCCACGCGGGTTGTGTCCGCAAAGCTAATGTTGTTT
TTGAGTCTTCGATCTTATCCTCCTTCAGATGAGTTGTGATCTGACTAAAA
AAAGGACTTTTTGAACAGAGGGGGGGGGGGAAGCGCACAGGCTCTCCAAA
CCTCTAAAACAGACAATTTCAAGCACGAAAAATGTAGAGTCGCCCTCTTC
CCCTTCTTGCAAGCTTGTAGTCCTGACCTGGAAGGGCCAAAGGGGCACGC
GACTTATCGCTGCACGCATCATGTTGGTTGGCCTCTCGGTGTCTCGTGCG
TCTCTCTCTCTTTGCCCCAGTACCAAGAGGCGTTCGTGCACTACCTGATC
GCCGCGGAGCAAGGCAACAAGGAGGGACAGGCCTCGCTGGCGTGGCTGCT
GGACAAGAGCATGGCGGCGGCGCCCGCGGGTTCGTCCCCGTTCGCTCTCG
TTCGCCCGGTGTGGGACCGCCTTGTTCGAAGCGCAAGGAGTGGCGACAGC
AGCAGCAGCAGCGGCAGCGATGGCGGTGGCGGTGGTGGCAGCAGTGAAAG
CGGCAGCGCTGGCGGCACCGGTGATCCTGGCAGAGAGCAGATCGGGGCCG
GCGAAGGTGCCGATGCCGATGCCGATGCCGATGTTGAGAGCAGAGGCGGG
AGGCGGAACAGGCGCAGCGGGATCGGCGGCGTGGTGGATGCCGTGCGGGA
GCTTGGCGGGGACCCCGAGTCGATGGCGCGCCGGTACCGGAGGCTGGCGG
CGGAGCAAGGGGACTCAGAAGCGAGGTACGTAGTTGGCGGAGTACACAAG
ACTTTTACCACAACCAAGGCAAGTCTTTTGTGATATTTAAGAGGTTTTCG
TGTTTTTTCACTCACTCTAAGAGGTTCTCGGATTTTCACTCACACAGCGG
AAGAATCAGTTCCACTTGGTGTGTGTGCGCGCGCACGTGGAAGAAGATTC
CATCACTCGCCGGCGCATATTGCCCAGGGTTTTGTTTTGGTATGTCGAGG
GGAGCGAAGCCCTAAAATAAGCGCTTCAAAAACTGATTCGGTCAGTCACA
CGAAATCAATTGTATTTAAATACGTACCGGTAAACAACAACGACGACACA
AACCCCCTTCCGCCGTCCCCCGACTCCCACCTGGCGTCGTGCGATTACTC
TTGAAAGGTGCGACATCGGAGACCACCTGTATCGGCAGGCAAAGGCCAAG
GGGGGCGTTCCCCCCGGCGTCGGTTGGCTACCCTGGGCCAAGCCCGAAAC
CAGCGATAGCGCCCACAAAGGAGCTGGCATGGGCGGCGGCAGCAGCAGCA
GCAGCAGCAGCGACGGCGGTAGCAAGGTCGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8060:3264..7795-

>mRNA_L-elsbetiae_contig8060.17055.1 ID=mRNA_L-elsbetiae_contig8060.17055.1|Name=mRNA_L-elsbetiae_contig8060.17055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2070bp|location=Sequence derived from alignment at L-elsbetiae_contig8060:3264..7795- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGGTACACCTGGAGTATTCGGACACGCGGGACGGCAGGGGGGCGGG
GGGGAAATGGAGTATGCTGCAGGCCTACATCTTGTTCCAGAAGGCGCTGA
TGTGGGTACACCTGGAGTATTCGGACACGCGGGACGGCAGGGGGGCGGGG
GGGAAATGGAGTATGCTGCAGGCCTACATCTTGTTCCAGAAGGCGCTGGA
GATGGGCAAGCTGTACGGCGATCCGCAGACAACCGCGGCGCTGCGGCTGG
GCAGCATGTTCCACTATGGCTGGGTGCCGTTCTTGGGCCACAACGCCACG
GAGGCGCAGGCGTACTACCAAGAGGAGATGGGCAAGCTGTACGGCGATCC
GCAGACAACCGCGGCGCTGCGGCTGGGCAGCATGTTCCACTATGGCTGGG
TGCCGTTCTTGGGCCACAACGCCACGGAGGCGCAGGCGTACTACCAAGAG
TCCGCGGACAACGGCGGAATGGACGCCCTCATAGTCCTCGCAGAGCTCCA
CCTGTTCGGGCTCAAAGTCCGCGGACAACGGCGGAATGGACGCCCTCATA
GTCCTCGCAGAGCTCCACCTGTTCGGGCTCAAAGGGGCGCTGGAGACTTC
GTGCGACACGGCGGCCAGCCTGTACAAGAAGTACGCCGACCTCGGCATCA
AGGAGGTTGCGTTGGCTCACGGAAAAATCACCTTCGAGCAGGGGCAGGGG
CGCTGGAGACTTCGTGCGACACGGCGGCCAGCCTGTACAAGAAGTACGCC
GACCTCGGCATCAAGGAGGTTGCGTTGGCTCACGGAAAAATCACCTTCGA
GCAGGGGCAGTACCAAGAGGCGTTCGTGCACTACCTGATCGCCGCGGAGC
AAGGCAACAAGGAGGGACAGGCCTCGCTGGCGTGGCTGCTGGACAAGAGC
ATGGCGGCGGCGCCCGCGGGTTCGTCCCCGTTCGCTCTCGTTCGCCCGGT
GTGGGACCGCCTTGTTCGAAGCGCAAGGAGTGGCGACAGCAGCAGCAGCA
GCGGCAGCGATGGCGGTGGCGGTGGTGGCAGCAGTGAAAGCGGCAGCGCT
GGCGGCACCGGTGATCCTGGCAGAGAGCAGATCGGGGCCGGCGAAGGTGC
CGATGCCGATGCCGATGCCGATGTTGAGAGCAGAGGCGGGAGGCGGAACA
GGCGCAGCGGGATCGGCGGCGTGGTGGATGCCGTGCGGGAGCTTGGCGGG
GACCCCGAGTCGATGGCGCGCCGGTACCGGAGGCTGGCGGCGGAGCAAGG
GGACTCAGAAGCGAGTACCAAGAGGCGTTCGTGCACTACCTGATCGCCGC
GGAGCAAGGCAACAAGGAGGGACAGGCCTCGCTGGCGTGGCTGCTGGACA
AGAGCATGGCGGCGGCGCCCGCGGGTTCGTCCCCGTTCGCTCTCGTTCGC
CCGGTGTGGGACCGCCTTGTTCGAAGCGCAAGGAGTGGCGACAGCAGCAG
CAGCAGCGGCAGCGATGGCGGTGGCGGTGGTGGCAGCAGTGAAAGCGGCA
GCGCTGGCGGCACCGGTGATCCTGGCAGAGAGCAGATCGGGGCCGGCGAA
GGTGCCGATGCCGATGCCGATGCCGATGTTGAGAGCAGAGGCGGGAGGCG
GAACAGGCGCAGCGGGATCGGCGGCGTGGTGGATGCCGTGCGGGAGCTTG
GCGGGGACCCCGAGTCGATGGCGCGCCGGTACCGGAGGCTGGCGGCGGAG
CAAGGGGACTCAGAAGCGAGGTGCGACATCGGAGACCACCTGTATCGGCA
GGCAAAGGCCAAGGGGGGCGTTCCCCCCGGCGTCGGTTGGCTACCCTGGG
CCAAGCCCGAAACCAGCGATAGCGCCCACAAAGGAGCTGGCATGGGCGGC
GGCAGCAGCAGCAGCAGCAGCAGCGACGGCGGTAGCAAGGTCGGAGTGCG
ACATCGGAGACCACCTGTATCGGCAGGCAAAGGCCAAGGGGGGCGTTCCC
CCCGGCGTCGGTTGGCTACCCTGGGCCAAGCCCGAAACCAGCGATAGCGC
CCACAAAGGAGCTGGCATGGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCG
ACGGCGGTAGCAAGGTCGGA
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