mRNA_L-elsbetiae_contig8.16975.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8.16975.1
Unique NamemRNA_L-elsbetiae_contig8.16975.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 1.170e-135
Identity = 226/318 (71.07%), Postives = 245/318 (77.04%), Query Frame = 1 
Query:    1 DKAKLPAGAAMCQLVGFDCFSEGSEGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQ---TEAEQDKGATTASKGPAANGDGCSGXXXXXXEANGRLGVSDTAXXXXXXXXXXXXXXXEGSVSQQERVFLGIVASYSNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPALQTKLF 945
            DKAKLPAG AMC+LVGFDCF+E S+GTTRIDHIASRG CRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAV+R GL+EA  AA AAG   G  +     TEA  D+  T    G +              E+NG  G                    EG VS +E VF  IVASY+++P+S+FGGD C MMD APPPP+SDERN RFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSS AAASLCGRCRGLSRKI+VELGIVLQANSAQELPEALLGA+RLNGFGVEDP LQTKL+
Sbjct:  179 DKAKLPAGRAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRDGLEEAKDAATAAGTLQGVPSDHIDTTEAAVDETDTENGLGQSVG------------ESNGLTGAGPQG---------------EGDVSGRESVFSRIVASYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 2.410e-106
Identity = 192/280 (68.57%), Postives = 209/280 (74.64%), Query Frame = 1 
Query:  109 GACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQTEAEQDKGATTASKGPAANGDGCSGXXXXXXEANGRLGVSDTAXXXXXXXXXXXXXXXEGSVSQQERVFLGIVASYSNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPALQTKLFP 948
            G CRERVEAMTSGDD PFLFIMNIQVRGTPPVSMVAYWAV+R GL+EA  AA AAG   G  +  T   +        +    NG G S       E+NG  G                    EG VS +ERVF  IVASY+++P+S+FGGD C MMD APPPP+SDERN RFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSS AAASLC RCRGLSRKI+VELGIVLQANSA ELPEALLGA+RL+GFGVEDP LQTKL+P
Sbjct:  408 GTCRERVEAMTSGDDGPFLFIMNIQVRGTPPVSMVAYWAVDRHGLEEAKDAATAAGILQGVPSDHTNTTE----AAVDETDTENGLGQS-----VGESNGLTGAGPQK---------------EGDVSGRERVFSRIVASYADIPVSTFGGDECSMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLYP 663
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.210e-31
Identity = 96/307 (31.27%), Postives = 138/307 (44.95%), Query Frame = 1 
Query:    1 DKAKLPAGAAMCQLVGFDCF-SEGSEGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQTEAEQDKGATTASKGPAANGDGCSGXXXXXXEANGRLGVSDTAXXXXXXXXXXXXXXXEGSVSQQERVFLGIVASYSNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVE 918
            DK K+ AG A+C LV +  + +E S    RIDH+A++G CR  VEA+   + APFLFI+NIQV G PP+SMV  +A+                                        PA              + + R   SD                     +  +  +  +     + P S       G+       P    RN RFKLIPR++ GP++VR AVG+ P LLG K+T RYYRG+ Y+ETD+  GS+A A  + G  R  S+ + VE+ I ++     ELPE L+G ++     +E
Sbjct:  146 DKLKVHAGTAVCPLVLYQLYRNEPSRLNDRIDHVAAKGKCRRIVEALRELNPAPFLFILNIQVPGHPPMSMVMIFAM----------------------------------------PA--------------DYDRRDCSSDAVKFR----------------NMLQTYYQDLPVHDPSNPQSPTEEGEAGLS------PSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDVHVGSNAVANHITGISRTYSKSVTVEIAITIEGRQEAELPEKLVGVVKFTHTDIE 376
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.350e-31
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 
Query:  592 PPPFSDE----------RNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPALQTKLF 945
            PPP SD            N+RFKLIP+++ GPW+VR+AVG+ P LLGTK+T RY+RGE YVET+++ GSS  A  + G CRG S +I+V+LG+VLQ   A  LPE LLG ++     V+DP     LF
Sbjct:   36 PPPASDVSGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDPRGVVPLF 163
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.000e-28
Identity = 101/312 (32.37%), Postives = 142/312 (45.51%), Query Frame = 1 
Query:    1 DKAKLPAGAAMCQLVGFDCFSEGSEG--TTRIDHIASRGACRERVEAMTSGDDA--PFLFIMNIQVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQTE-AEQDKGATTASKGPAANGDGCSGXXXXXXEANGRLGVSDTAXXXXXXXXXXXXXXXEGSVSQQERVFLGIVASY-SNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVE 918
            DKAK+ +  A C+L+ F  +   ++   + RIDHIASRG  +  ++   S D    PFL+I+NIQ+ G PP+SMV Y+                         L T+ A+QD  A T                                                       + FL +   Y  ++P+++          DA   P    RN RFKLIP +  GP++V++AVG+ P LLG K+T RY+RGE YVETD+  GSSA A  + G CRG  + + VE+GIVL+  S  ELPE L+G  R     +E
Sbjct:  246 DKAKVKS-PATCRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQRPPFLYIVNIQLPGKPPLSMVMYFL------------------------LPTDLAQQDPSADT-------------------------------------------------------QKFLDLFQKYYEDIPITT--EPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475
[Close]
BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.330e-28
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 1 
Query:  607 DERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLN 903
            D RN RFKLIP ++ GP++VR AVG+ P LLG K+T RYYRG  YVETD+D  SS+ AA +   CRG S  ++V+LGIVL+  +  ELPE  LG +RLN
Sbjct:    2 DFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDVDVASSSVAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLN 100
[Close]
BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 9.180e-25
Identity = 100/317 (31.55%), Postives = 132/317 (41.64%), Query Frame = 1 
Query:    1 DKAKLPAGAAMCQLVGFDCFSEGSEGT-TRIDHIASRGACRERVEAMTS--GDDAP--FLFIMNIQVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQTEAEQDKGATTASKGPAANGDGCSGXXXXXXEANGRLGVSDTAXXXXXXXXXXXXXXXEGSVSQQERVFLGIVASYSNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQA-NSAQELPEALLGAIRL-----NGFGVE 918
            D+ K PAG  + +LV    F    E    R DHIASRG   E +  M    G D    F F++N QV G PP+SMV  +A+ R               EDGC                                                                        F  +   + + PM    G+  G  D       SD +N RFKLIP ++ GP M++ AVG+ P +LG K+T RY+RGE YVE D+D  SSA A+ +   CRG ++ + VE+GI+LQ  +   ELPE LLG I +     N FGVE
Sbjct:  585 DRLKTPAGPPVGELVIAYVFRISPENPGQREDHIASRGRMAEILREMQDMKGRDGKHTFFFLLNFQVPGDPPLSMVTVFALPRDRRPA----------EDGC------------------------------------------------------------------------FWTLFDRFVDFPMDDIKGE--GKSDRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDINSFGVE 817
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.160e-23
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 1 
Query:  598 PFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVE 918
            P  D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG  YVETD+D GSS  A  +   CRG ++ + VELGI L+    +ELPE ++G IRL    ++
Sbjct:  519 PVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDID 625
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BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: T0RWT2_SAPDV (EDR2_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWT2_SAPDV)

HSP 1 Score: 112 bits (279), Expect = 3.120e-23
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1 
Query:  520 VASYSNLPMSSFGGDA--CGMMDD--APPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPALQTKLFP 948
            V SY  LP     GD    G+     +  P     ++ARFKL+P ++ GPW+++ AV   P + G+K+T RY+ G  YVE DMD GSSA A+++   CRG + ++ V+L + LQ NS  ELPE + G++R   F   D AL T + P
Sbjct:  179 VVSYWRLPAEGLSGDTKFAGLFSQFQSNEPEAQAFQDARFKLVPTIVDGPWLIKAAVPQKPAITGSKLTQRYFVGRNYVEVDMDIGSSAIASNIVSLCRGYAERLVVDLSLTLQGNSEAELPERIFGSVR---FSHLDLALATAIPP 322
[Close]
BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Match: A0A2P4X7C6_9STRA (EDR2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7C6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.110e-22
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 1 
Query:  532 SNLPMSSFGGDACGMMDDAPPPPFSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAAASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPALQTK 939
            S L  +S   D C  +   P   F   R  R KLIPRV+ G W +R+ VG+TP +LGTKI  +YY+G+ Y+E D D GSS  A  +     G SR + ++L  V++A SA ELPE +LG +RL+   +      TK
Sbjct:   20 SELKKNSVFADLCHEVLRGPNDEF---RTQRIKLIPRVVQGTWPIREGVGTTPAILGTKIYQKYYQGKNYLEADYDIGSSTVATGILKLLLGYSRDLIIDLAFVIEAQSAMELPERVLGTVRLDCVDLRHAVQYTK 152
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8.16975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIG2_ECTSI1.170e-13571.07EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K9Q7_9PHAE2.410e-10668.57EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2WM21_9STRA1.210e-3131.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YT80_9STRA2.350e-3150.00EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2CMY1_9STRA2.000e-2832.37Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835ZES7_9STRA4.330e-2856.57EDR2_C domain-containing protein (Fragment) n=1 Ta... [more]
W7U3Y4_9STRA9.180e-2531.55PX domain-containing protein n=2 Tax=Monodopsidace... [more]
D7G1Z5_ECTSI1.160e-2351.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
T0RWT2_SAPDV3.120e-2340.14EDR2_C domain-containing protein n=1 Tax=Saprolegn... [more]
A0A2P4X7C6_9STRA2.110e-2241.18EDR2_C domain-containing protein n=1 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8contigL-elsbetiae_contig8:29685..34867 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score405.2
Seed ortholog evalue2.7e-110
Seed eggNOG ortholog2880.D7FIG2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1336)
EggNOG OGs28KK0@1,2QT1F@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDomain of unknown function DUF1336
Ec32 orthologEc-28_000150.1
Exons6
Model size2438
Cds size921
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8.16975.1prot_L-elsbetiae_contig8.16975.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8 31172..34837 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816884.0767257-UTR-L-elsbetiae_contig8:29684..311711622816884.0767257-UTR-L-elsbetiae_contig8:29684..31171Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8 29685..31171 -
1691683885.6846688-UTR-L-elsbetiae_contig8:29684..311711691683885.6846688-UTR-L-elsbetiae_contig8:29684..31171Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8 29685..31171 -
1622816884.1640482-UTR-L-elsbetiae_contig8:34837..348671622816884.1640482-UTR-L-elsbetiae_contig8:34837..34867Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8 34838..34867 -
1691683885.7690065-UTR-L-elsbetiae_contig8:34837..348671691683885.7690065-UTR-L-elsbetiae_contig8:34837..34867Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8 34838..34867 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816884.0903418-CDS-L-elsbetiae_contig8:31171..312731622816884.0903418-CDS-L-elsbetiae_contig8:31171..31273Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 31172..31273 -
1691683885.6986017-CDS-L-elsbetiae_contig8:31171..312731691683885.6986017-CDS-L-elsbetiae_contig8:31171..31273Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 31172..31273 -
1622816884.102838-CDS-L-elsbetiae_contig8:31966..320961622816884.102838-CDS-L-elsbetiae_contig8:31966..32096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 31967..32096 -
1691683885.7121117-CDS-L-elsbetiae_contig8:31966..320961691683885.7121117-CDS-L-elsbetiae_contig8:31966..32096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 31967..32096 -
1622816884.1148362-CDS-L-elsbetiae_contig8:32693..328851622816884.1148362-CDS-L-elsbetiae_contig8:32693..32885Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 32694..32885 -
1691683885.725556-CDS-L-elsbetiae_contig8:32693..328851691683885.725556-CDS-L-elsbetiae_contig8:32693..32885Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 32694..32885 -
1622816884.127639-CDS-L-elsbetiae_contig8:33091..334351622816884.127639-CDS-L-elsbetiae_contig8:33091..33435Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 33092..33435 -
1691683885.7356184-CDS-L-elsbetiae_contig8:33091..334351691683885.7356184-CDS-L-elsbetiae_contig8:33091..33435Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 33092..33435 -
1622816884.1404634-CDS-L-elsbetiae_contig8:33745..338211622816884.1404634-CDS-L-elsbetiae_contig8:33745..33821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 33746..33821 -
1691683885.7477057-CDS-L-elsbetiae_contig8:33745..338211691683885.7477057-CDS-L-elsbetiae_contig8:33745..33821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 33746..33821 -
1622816884.1525624-CDS-L-elsbetiae_contig8:34760..348371622816884.1525624-CDS-L-elsbetiae_contig8:34760..34837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 34761..34837 -
1691683885.758237-CDS-L-elsbetiae_contig8:34760..348371691683885.758237-CDS-L-elsbetiae_contig8:34760..34837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8 34761..34837 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8.16975.1

>prot_L-elsbetiae_contig8.16975.1 ID=prot_L-elsbetiae_contig8.16975.1|Name=mRNA_L-elsbetiae_contig8.16975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MCQLVGFDCFSEGSEGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNI
QVRGTPPVSMVAYWAVNRQGLQEAATAAEAAGGEDGCDALQTEAEQDKGA
TTASKGPAANGDGCSGGGGGGGEANGRLGVSDTAAAEEDGNEDEGGGGEE
GSVSQQERVFLGIVASYSNLPMSSFGGDACGMMDDAPPPPFSDERNARFK
LIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSAAA
ASLCGRCRGLSRKINVELGIVLQANSAQELPEALLGAIRLNGFGVEDPAL
QTKLFP*
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mRNA from alignment at L-elsbetiae_contig8:29685..34867-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8.16975.1 ID=mRNA_L-elsbetiae_contig8.16975.1|Name=mRNA_L-elsbetiae_contig8.16975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5183bp|location=Sequence derived from alignment at L-elsbetiae_contig8:29685..34867- (Laminarionema elsbetiae ELsaHSoW15)
GACAAAGCGAAGCTGCCGGCGGGGGCGGCCATGTGCCAGCTCGTGGGGTT
CGACTGCTTCTCGGAAGGATCCGAGGGCACCACTAGGATCGACCACATCG
CCTCGAGGTAAAAACGAACCAACCGCACCTACGTAAACAGACGCTAAGAG
GCTTAGTTAGCACATTAGCTGCGTTTGAGACTATCGTGCATACATAGCTG
GCGCGTAAATTTACGGCTACAGCACAACATCGTGATCAAGCGTAGGTGGT
AAACAAGCGTACATATATATATCCCCACAGATCCAGCCGAGGGCAAATAT
ATATTTTGGCACAGCACGACAGACAACGAGCCTGCCCCCCGCTGGGCATG
AAATAGTGGGTGGTTCGAAGTTGCAACCGAAGCAGGAGCGGGCGATCTCC
CTCCTGCGTAAAGTTGAGCCCAAGTCGCGGTCAGCCTCTACAGTTTGAAG
AATTTGATCATCTTGTGAGGCGTTGCAGGGCCCCCTGTATCGCACGATAC
AAACACTACGGCATCACGGCGGGCTCTACCCGCCTGAATACTTGTTGGCC
GACCTCGCAAATCTTTAAATCTTTTCAGGGGAGATGTTGAACTCTTCTGA
TATTTTAGGTTGTTTTTTCTGCTCGCTTCGGCAAATATTACGTCACTGTA
TGGAATACCATTTGAACCCCATATGGAGTCCTTGCTCTAGTATGGGGTAG
GTTCCATCTTTGATTCGTTGTTTATTTAAAAAAAACTGACTAATGGCGTT
GGTGGTTGGACGGCTAGCGAAACGAGGTAGTACAAAACAGCAGTGCCAGT
AGTAGGTAAGGTAGATCACTCATGAGGTACATACAGGAAATGTTTGTCTG
CTCTTTGCTCTATGTAAACGGTTGCAATACCTAGGCAGACTTGGTGCGCC
CGTGGTTGTTCCTTTCTTCTCTCGCTTTTACTTGCTTTCCTCGCGCACCA
GGTGTGCTGTGCTTCGGACTCAAAAACGCTCGTGCTCTGCTCTGCTCTGC
TCTGTTCTGCGCTGCGCTGCGCTGGCCTGTCGTTTTTTCTGTGCAGGGGG
GCCTGCCGCGAGCGTGTGGAGGCGATGACGTCGGGGGACGACGCCCCCTT
TCTTTTCATCATGAACATTCAGGTCGGTTTCACGTGCCGTGTCCCGTCCG
CGTGGTTGCTCCCTTTCCTGCTTTCACGGTCGCGTTGTAAGCAACCCACC
ATAATATCGTGATGAGCACCCGGTTACTAGGGGCCGTCTGTCGTCCACGC
TTCTTATTCTCATAACCGCATCAAACGCCACGTGTTGTGATGAACATCCA
TCGTCAACGCTGTATTCGTTCGTTTTTTGTGTCGCTGCTTTATACTAGGG
GCTCCTCCGTTGCGGGCAATTTACAAATAAAGAGCAGTCCTTTGGTGTTG
AATTTTCTCTTTGAAAATCCCCATGAAACCAGGTTAGAGGAACCCCACCA
GTGTCGATGGTGGCCTACTGGGCCGTCAACAGACAAGGCCTGCAAGAAGC
AGCAACAGCAGCCGAAGCAGCTGGCGGTGAAGATGGTTGCGACGCCCTCC
AAACCGAAGCCGAGCAAGATAAAGGCGCCACTACAGCGAGCAAAGGACCA
GCAGCCAACGGCGACGGGTGCAGCGGCGGCGGCGGTGGCGGCGGCGAAGC
CAATGGCCGGCTGGGTGTTTCTGACACGGCCGCGGCTGAGGAGGATGGCA
ACGAAGACGAGGGAGGAGGAGGAGAAGAAGGGAGTGTTTCGCAGCAGGAG
AGAGTGTTTTTGGGCATCGTTGCCAGGTACGGTACTATTTTATCACTAAC
TACGTTTCTGAACCACTCCTTCTCGTGTATGTTCCCTTTGTTTCGTATAC
TGGACACTTGACCGATTGATACCTGGTATTTACACATACATATTCCTTTG
GTTCTGCTTTGGACCCAGGGTTTTTGATTCTCCTTCCTCGTTCTCTTTTC
ATTCCGCCCGCCCACCCGCCCGCGCGCCGCAGCTACTCCAACCTACCCAT
GAGCAGCTTCGGGGGCGACGCGTGCGGTATGATGGACGATGCGCCGCCCC
CGCCCTTCTCCGACGAGCGCAACGCCAGGTTCAAGCTTATCCCGAGAGTG
ATCGGCGGCCCGTGGATGGTCAGGAAAGCGGTCGGCTCGACCCCGGTTTT
ATTGGGCACCAAGATCACGCACAGGTGTGAATCAAAGCGTGAAGTTTCCC
TCTGTATTCAAGGCTGAGAGAGTGGTAAGAGGAGGAATTAGGAAGATAAA
AGTTTGATTTAATGCATAAAAGTATTCAAAAACACGCCACAGTTGCGCAC
GTAGGGTGTGTGTAGGACGGAGGTTTGAGGTATGCGGTGTGGTGGTTGTC
AAGCGTCTCTCTATTTTCACCATATTTTCATGCGAGGTAAATATTTAAAA
AGAAAACATCATGATCTCCGTGGACAGGGAGTGTTCCTCTTCTCCCCACT
CGTGCTTTTGATCGGCGCCAAAATCACGAAACAGGCATTTCGTTGCCATG
TTCGTACATATGTACAGCCATGTAGCGGTAAACGCGTTTGACAATGAGAC
TTGAGACAGGTTTGGCGCATAAATGTTGCCATGATCCTTAAAGCGGCGAT
ACTTACCTGGACAGCAGGGTGACGTGAGGGTTGTGATTCGTCAGTTAAAC
GGAGTAGGTGCTACGTGCGGATACTGAGTGCGCAGACCAGCTATTTTAGT
CTGCCGCAGAGAAATGCAGGAACATTCAAACAGCGGCGCACTTGCTCGCA
TGCTCCCCGTGACGAGTGCAGGTACTACCGAGGCGAGCGCTACGTGGAGA
CCGACATGGACACCGGTTCTTCCGCCGCAGCGGCTAGCTTGTGCGGCCGC
TGCCGGGGGCTGAGCCGAAAGATCAACGTAGAGCTCGGAATCGTCCTCCA
GGTATGTTTTTCGATGGTACGGGTGCTAACAGCTTGCCAGTCCCCCCCCC
CCCCCTTCCACCCAGTACTGCGAAGTACTAATTATCCCCGTACACTTGTA
CCGGCGAACACAGATACTTAAAACGTGCGTTCCCGTGCCCCCTGTTTCAA
GCCCGGCTCGCCGCACATTTGTTTGTTTTGATTGATTTGTTTACACTTGG
GACGGCACGGGATTTTTTCGTCTTTCTTCCAAGCTTTGATAGCTGACCAA
GACATGCCACATATGCCGAGTTTTTTCTTTTGTCCTTTGCTTCCAAGAGC
AGCCAGCTCGCCCCGAAAATCAAGACCAGGTTTTGTTATGAACGACTAGC
GTGGACTCATCCTCGACCCTCACTCTATGACACTCGAGGCTGAAGCTCTA
GACACAAGATACCCTGAACACCTCCAAAACTATCTGAACGCCTATACCGG
TACATAGTAGGTCAACCCCCGTACGGTGCCCCCCGTCCCTGCTGGGTCGG
TGGAGTTCGCCGGCAACAGAATATCCGATCGCCCTTGTCTAGTATTTGGC
TCCGTCACAAATGAACAGTGCACCTTTCTCCAGTCAGGCCAAACTATTGC
CAACGCTATTCCTGGTGAAACACACACTTTTCCGGGCTGATTAACCCACA
ACGCTTTGAACGCTCGCAAACGACCAAATGGCGGCGTTTCGCAGGCTAAC
TCCGCCCAGGAGCTCCCCGAGGCTCTGCTGGGAGCGATTCGCCTCAACGG
CTTCGGGGTGGAGGATCCCGCCCTGCAGACCAAGCTGTTCCCGTAATTTA
GGGATCGACTCTAAACTAGCGGGATAAAGAGAGAAGGCGGCGGCACGCGG
TTCTAGAAAGGAGCAGGCGTGAGGTGCATCGGCACACGACAGCGTAGGTG
TTTTTCGGTCGGGTCCGAAACAGAGTGTCGAGTTCGAGGAAAGTACGTGC
CCAGAAACGAGGCAAATGGATGGATGATCTACGACGACGTTTTACGGTGT
CAACTAGGAAGTACTGGACGTAACCCCGTCCTTGCGGGGGGGGGCAGGGA
GGAAGGAAGAGAAGGAGGAAAGAGCAGAGGACATGCAAACAGCGGCGCAA
ACGAACGCGAAAATCGGGGACAAACGATAGGAAGGCGGCCAGCGGCCGCG
AAGCGAGGCTGGCCAGCAGGCAGGCAAGCGTCCAACTGTGCGTCGAGACG
CGGGTGTACGCACAAATAGGCTTGTATTGTACCAGACAGTAGGGCAGATA
CACGGTGATGTACATACGGGGAGGAAGGGAGTCCGCACGCGTGTTGCTGG
TGGGCAGAAGTGGTCGGCCGCTGCTGTGCCGTAGTTTCGAGGTTGGTTAC
GCCGACCTTTGATTGCTGCTACGATCCGCGCAAGGCAGTACGCCGTGTAC
TGGAAGACGCGTTGTACATTTTTACGTTGGCGGAATTAGCACTTTTACGC
CGCCGGCCAGCCCTCTTCGGCTGTCTAGACGAGCTCTCCCCAGATTTTGC
GCCGAGCTCGGTTGCATCAAAGGATGCGTAATTGTTTTTTGGGCAGTGGT
GTTGTTCTTGGTGATGTTTGTCTGCGTTGCGTCGCGCCGCGGCGCGACCT
TCGCGCGTCGAGAACGCCGAAAACCACTGGGGACGGTGAACTAAAGCCAT
AGATAGGGTTGGTGCCGGCTGTCTTATTTTTGGCTTGAAATAGCGGAACG
GCAGCAGCGTATACCTGACGCCTCGAGGCGAACAACAGAAACATCGAGCA
GAGAAGCCTCGAATTCCGCCTTTTTGGGCCACAGGGGGGTGGTGGCAAAC
TTGTGCGTTTTGCTCCGACCCGCATCCTCTTCCCAAGAGCCTCTTCTCTT
CCTCTGACAACAGTTACAAACAGAGGACGTCCGCTGCTTTAAAGTGATGT
GCGGTGAGGGGCTTCCCGCGGAGGTAAATAAGTCATTCCTCCACTCCCGT
AGGCGTAGTACAGGGGAAGAGGGTGTGAGAGAGAGAGGGCCCTGTGAAAA
TGTATCTAACGGATCTGTGTTGTAAAATGCACAGCAGAAATGGATGCAGG
GACGAAAAGGAAGAGTCTCAAATGGACCCTTTGTTGTTGCCACGAGGTAT
GAAAGAGGAACTACGTCGTGGATCTTCGCCGTGTGTGTGCAGTGCTATAT
ATGGCGATCTGGCGGTCTGAAATTGAATTTTACGCTGGCTCCATTGTACT
ATCTAATCGCCCATGTCTTGCTCGAGCTGAGAGAGATGGAGAGCGAGCAG
GGTTCCGCACAGAGGCTTGGCTTTCAAAGCACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8:29685..34867-

>mRNA_L-elsbetiae_contig8.16975.1 ID=mRNA_L-elsbetiae_contig8.16975.1|Name=mRNA_L-elsbetiae_contig8.16975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig8:29685..34867- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCCAGCTCGTGGGGTTCGACTGCTTCTCGGAAGGATCCGAGGGCAC
CACTAGGATCGACCACATCGCCTCGAGATGTGCCAGCTCGTGGGGTTCGA
CTGCTTCTCGGAAGGATCCGAGGGCACCACTAGGATCGACCACATCGCCT
CGAGGGGGGCCTGCCGCGAGCGTGTGGAGGCGATGACGTCGGGGGACGAC
GCCCCCTTTCTTTTCATCATGAACATTCAGGGGGGCCTGCCGCGAGCGTG
TGGAGGCGATGACGTCGGGGGACGACGCCCCCTTTCTTTTCATCATGAAC
ATTCAGGTTAGAGGAACCCCACCAGTGTCGATGGTGGCCTACTGGGCCGT
CAACAGACAAGGCCTGCAAGAAGCAGCAACAGCAGCCGAAGCAGCTGGCG
GTGAAGATGGTTGCGACGCCCTCCAAACCGAAGCCGAGCAAGATAAAGGC
GCCACTACAGCGAGCAAAGGACCAGCAGCCAACGGCGACGGGTGCAGCGG
CGGCGGCGGTGGCGGCGGCGAAGCCAATGGCCGGCTGGGTGTTTCTGACA
CGGCCGCGGCTGAGGAGGATGGCAACGAAGACGAGGGAGGAGGAGGAGAA
GAAGGGAGTGTTTCGCAGCAGGAGAGAGTGTTTTTGGGCATCGTTGCCAG
GTTAGAGGAACCCCACCAGTGTCGATGGTGGCCTACTGGGCCGTCAACAG
ACAAGGCCTGCAAGAAGCAGCAACAGCAGCCGAAGCAGCTGGCGGTGAAG
ATGGTTGCGACGCCCTCCAAACCGAAGCCGAGCAAGATAAAGGCGCCACT
ACAGCGAGCAAAGGACCAGCAGCCAACGGCGACGGGTGCAGCGGCGGCGG
CGGTGGCGGCGGCGAAGCCAATGGCCGGCTGGGTGTTTCTGACACGGCCG
CGGCTGAGGAGGATGGCAACGAAGACGAGGGAGGAGGAGGAGAAGAAGGG
AGTGTTTCGCAGCAGGAGAGAGTGTTTTTGGGCATCGTTGCCAGCTACTC
CAACCTACCCATGAGCAGCTTCGGGGGCGACGCGTGCGGTATGATGGACG
ATGCGCCGCCCCCGCCCTTCTCCGACGAGCGCAACGCCAGGTTCAAGCTT
ATCCCGAGAGTGATCGGCGGCCCGTGGATGGTCAGGAAAGCGGTCGGCTC
GACCCCGGTTTTATTGGGCACCAAGATCACGCACAGCTACTCCAACCTAC
CCATGAGCAGCTTCGGGGGCGACGCGTGCGGTATGATGGACGATGCGCCG
CCCCCGCCCTTCTCCGACGAGCGCAACGCCAGGTTCAAGCTTATCCCGAG
AGTGATCGGCGGCCCGTGGATGGTCAGGAAAGCGGTCGGCTCGACCCCGG
TTTTATTGGGCACCAAGATCACGCACAGGTACTACCGAGGCGAGCGCTAC
GTGGAGACCGACATGGACACCGGTTCTTCCGCCGCAGCGGCTAGCTTGTG
CGGCCGCTGCCGGGGGCTGAGCCGAAAGATCAACGTAGAGCTCGGAATCG
TCCTCCAGGTACTACCGAGGCGAGCGCTACGTGGAGACCGACATGGACAC
CGGTTCTTCCGCCGCAGCGGCTAGCTTGTGCGGCCGCTGCCGGGGGCTGA
GCCGAAAGATCAACGTAGAGCTCGGAATCGTCCTCCAGGCTAACTCCGCC
CAGGAGCTCCCCGAGGCTCTGCTGGGAGCGATTCGCCTCAACGGCTTCGG
GGTGGAGGATCCCGCCCTGCAGACCAAGCTGTTCCCGTAAGCTAACTCCG
CCCAGGAGCTCCCCGAGGCTCTGCTGGGAGCGATTCGCCTCAACGGCTTC
GGGGTGGAGGATCCCGCCCTGCAGACCAAGCTGTTCCCGTAA
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