mRNA_L-elsbetiae_contig7940.16911.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 214 bits (545), Expect = 1.840e-60 Identity = 118/256 (46.09%), Postives = 155/256 (60.55%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKF--GVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFA------LEYVRYAFNTHIPRGSPCFCLLSQRLLSTFCQLAH--FMQNFKEDNSRGFFGACKARFRKWTERHQHLPLSTAR 738 M +FMGPLGKGSWHEW H+ +LLG+VWYN SRSE++N N ++K +V +F W KFVRPAETRWMV+ + A L RW+ V WLF ++ L T F YW ++ ML++P +R+ F LGE + WAY+ +RGKGG+F+K +G Q L PGMRL EVADF+ LE +R T+ F + +R+ +T + FM NF ED +GFF K R+ KW ERHQ LPLS AR Sbjct: 1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKGEGVGRQ-LFPGMRLVEVADFSRLLLVKLETIRKDPKTY-------FAAVLERVQTTLSEAMAKLFMTNFSED--KGFFAEFKQRWIKWMERHQQLPLSMAR 246
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 185 bits (469), Expect = 6.770e-52 Identity = 115/240 (47.92%), Postives = 146/240 (60.83%), Query Frame = 3 Query: 696 MDGETSAPAAQHRTEIACSSFFVGKWVGSPDQAWEPAVGQEFARALLLALWEKEFTDKAWARCK*QHGFLEI*KKDLECAISPEQFDELT------------------RWAASARGKAKIVEDDDEEGNPSSRVSSFRQIFEFPLLYKWACERIFFAPIHQQLVESVFWLYDKRTQKAEMREMDLVRLGQYRSSESRAIGRLSPTSEEIRTAGKLAVARAKAFQLETISAQPHASKQRKR 1361 MD P + R +ACSSFF GKW GS ++A+E AVGQE+ARA LLALW + + W +H +LEI + DL A + E+ DELT R+A SAR K +IV DDD E N + RVS F I+ FPLLY+WAC I FAPIHQQLVES F +D TQK + RE+D+VRLGQ+RSS SR + RL T++EIR AG A+A A+ + A P+ + RKR Sbjct: 9 MDMHQHLPYSMAR--LACSSFFEGKWAGS-EKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDAE-NQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKR 244
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 188 bits (478), Expect = 4.890e-51 Identity = 107/256 (41.80%), Postives = 147/256 (57.42%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKF--GVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFA------LEYVRYAFNTHIPRGSPCFCLLSQRLLSTFCQLAHFMQNFKEDNSRG--FFGACKARFRKWTERHQHLPLSTAR 738 M FMGPLGKGSWHEW H+ +LLG+VWYN SRSE +N + ++K +V A+F W KF+RPAETRWMV+ + A L RW+ V WLF ++ L T F YW ++ ML++P +R+ F LGE + WAY+ + GKGG+F+K +G +RL P MRL E ADF+ LE +R T++ L R+ +T ++F+ + RG F K R+ K +RHQ LPLS AR Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEGVG-RRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYV-------AALLDRVRTTLSDPMR-GESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMAR 247
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE) HSP 1 Score: 178 bits (451), Expect = 8.750e-50 Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKF--GVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFALEYVRYAFNTHIPRGSPCFCLLSQRLLSTFCQ--LAHFMQNFKED 651 M FMGPLGKGSWHEW H+ +LLG+VWYN SRS ++N ++K +V A+F W KF+RPAETRWMV+ + A L RW+ V WLF ++ L T F YW ++ ML++P +R+ F LGE + WAY+ + GKGG+F+K +G +RL PGMRL EVADF+ ++ H F L R+ +T FM NF ED Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEGVG-RRLSPGMRLVEVADFSRLLLQKLETIH-KDPQTYFAALLDRVRTTLSDPMAKVFMLNFSED 219
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 182 bits (463), Expect = 4.120e-49 Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKFGVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFALEYVR 537 MECEFFMGPLGKGSWHEW HLVALL +WYN+SRS+++ + + KNLV GV+W KF+RPAETRWMVI +AAA LE RWD + ML +P IR+ AKF L + VL WAY+ +RG+GGYF++ G +RLPPGMRLAE ADF+L V+ Sbjct: 1 MECEFFMGPLGKGSWHEWEDNHLVALLATLWYNISRSDSSCISWRRVKNLVFRAKGVMWICKFIRPAETRWMVIRDAAALLEERWD------------------------ESTYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVK 155
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.720e-48 Identity = 102/234 (43.59%), Postives = 139/234 (59.40%), Query Frame = 1 Query: 106 RSEATNTNRAQFKNLVHAKFGVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFALEYVRYA--FNTHIPRGSPCFCLLSQRLLST------------------FC---QLAHFMQNFKEDNSRGFFGACKARFRKWTERHQHLPLSTAR 738 RS+++ + +F+NLV GV W KF+RPAETRWMV+W+AAA LE RWD V WL +W KLL TPF+ YW++++ ML +P IR+ AKF L + VL WAY+ +RG+GGY ++ G +RLP GMRLA++ADF+L V H + P +++ LS +C QLAHFM+NF+ + S G F AR+ KW + HQHLP S AR Sbjct: 285 RSDSSCISWERFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKS-GLFREMIARWTKWMDMHQHLPYSMAR 517
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 169 bits (429), Expect = 9.480e-46 Identity = 104/240 (43.33%), Postives = 143/240 (59.58%), Query Frame = 3 Query: 696 MDGETSAPAAQHRTEIACSSFFVGKWVGSPDQAWEPAVGQEFARALLLALWEKEFTDKAWARCK*QHGFLEI*KKDLECAISPEQFDELTR------------------WAASARGKAKIVEDDDEEGNPSSRVSSFRQIFEFPLLYKWACERIFFAPIHQQLVESVFWLYDKRTQKAEMREMDLVRLGQYRSSESRAIGRLSPTSEEIRTAGKLAVARAKAFQLETISAQPHASKQRKR 1361 MD SAP QH +++ + GKW G+ D+A E AVG+EFARALL+ALW ++ W + +H L I + DL A +P + D+LT +AASA K ++V DD + NP RVS+F I+ FPLLY+WA IF A IH+QLV SVF YD TQ+ + RE+D+VRLGQ+RS++SR I +L ++ EIR AG A+A A+A + A P+ +QRKR Sbjct: 1 MDRHASAPPLQHG-QVSLQLLYEGKWAGA-DKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKR 238
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5KSR2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.190e-43 Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKF--GVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDG 465 M FMGPLGKGSWHEW H+ +LLG+VWYN SRS ++N N ++K +V A+F W KF+RPAETRWMV+ + A L RW+ V WLF ++ L T F YW ++ ML++P +R+ F LGE + WAY+ + GKGG+F+K +G Sbjct: 1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGNFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEG 157
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.020e-37 Identity = 90/239 (37.66%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKF--GVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAK--------------WV--------PL-----------------------------------------KLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFA 522 M FMGPLGKGSWHEW H+ +LLG+VWYN SRSE++N N ++K +V A+F W KF+RPAETRWMV+ + A L RW+ V WLF + WV PL L T + YW ++ ML++P +R+ F LGE + WAY+ + GKGG+F+K +G +RL PGMRL EVADF+ Sbjct: 1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEGVG-RRLSPGMRLVEVADFS 238
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.260e-37 Identity = 95/254 (37.40%), Postives = 129/254 (50.79%), Query Frame = 1 Query: 1 MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLVHAKFGVVWKTKFVRPAETRWMVIWEAAAALEGRWDVVLWLFAKWVPLKLLSTPFLQYWYRAMVMLKNPRIRLQAKFAGELGEKVLIWAYH*LRGKGGYFVKPDGKEVQRLPPGMRLAEVADFA------LEYVRYAFNTHIPRGSPCFCLLSQRLLSTFCQLAH--FMQNFKEDNSRGFFGACKARFRKWTERHQHLPLSTAR 738 M +FMGPLGKGSWHEW H+ +LLG+VWY+ SRSE++N N ++K + K VR R++ T F YW ++ ML+NP +R+ F LGE + WA + +RGKGG+F+K +G +RL PGMRL EVAD + LE +R T+ F + +R+ +T + FM NF ED + FF K R+ KW ERHQ LPLS AR Sbjct: 1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESSNANFQRWKRV----------EKLVREYAARYLN----------------------------KTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKGEGVG-RRLFPGMRLVEVADCSRLLLLKLETIRKDPKTY-------FAAVLERVRTTLSEPMEKLFMTNFSED--KVFFAEFKKRWIKWMERHQQLPLSMAR 206 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7940.16911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7940.16911.1 >prot_L-elsbetiae_contig7940.16911.1 ID=prot_L-elsbetiae_contig7940.16911.1|Name=mRNA_L-elsbetiae_contig7940.16911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MECEFFMGPLGKGSWHEWSGQHLVALLGLVWYNLSRSEATNTNRAQFKNLback to top mRNA from alignment at L-elsbetiae_contig7940:4177..5891+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7940.16911.1 ID=mRNA_L-elsbetiae_contig7940.16911.1|Name=mRNA_L-elsbetiae_contig7940.16911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1715bp|location=Sequence derived from alignment at L-elsbetiae_contig7940:4177..5891+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7940:4177..5891+ >mRNA_L-elsbetiae_contig7940.16911.1 ID=mRNA_L-elsbetiae_contig7940.16911.1|Name=mRNA_L-elsbetiae_contig7940.16911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig7940:4177..5891+ (Laminarionema elsbetiae ELsaHSoW15)back to top |