mRNA_L-elsbetiae_contig7936.16902.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A6H5L4S8_9PHAE (SpoU_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S8_9PHAE) HSP 1 Score: 356 bits (914), Expect = 1.950e-116 Identity = 183/205 (89.27%), Postives = 192/205 (93.66%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 R+FHKRRTRDDGGK+LAEGHRLVCDLIEGG +P LVI ALRASPGPRLQAALETL ADVVAVAPAEVVQRCCDTV SQGVVALVERPVLPLP T+QTVL+CDGIQDPGNLGTLVRTAAGLGAD VVLTG+CVDYWAPKTVRASMGASFRLPSLRLESW EV ELM+ARG+RMYAA+GGA LSHFDADWTSPSALVVGAEARG Sbjct: 80 RSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI----ALRASPGPRLQAALETLSADVVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARG 280
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A835Z4A7_9STRA (tRNA/rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A7_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.280e-71 Identity = 118/205 (57.56%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 +T HKR++RD G+VL EG RLV D ++ G SP LV+VSPEAL + G L A L+ L +DVV +A + V R CDTV+ QGVVA+V RP+LPLP T++ LV DG+ DPGN+GT+VRTAA LG D VV+TG CVD W+PK +RASMGA+FR+PS+ +W E EL+QARG+ +YAA+GGA+ +H++ W+ PSALVVG+EA G Sbjct: 30 KTLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEG 234
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A7S2B686_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B686_9EUKA) HSP 1 Score: 159 bits (403), Expect = 6.160e-42 Identity = 86/188 (45.74%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 52 EGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 EGHRLV D + G P V++ AL +S G RL AL L D V PA +V++ DT QGV+A++ LPLP VLVCDGI DPGNLGTL+R+AAG G D V+L C D W KT+R+ MGA FR+P + +WA+ ++L+ AA+ G L+H + DW +AL+VG+EA G Sbjct: 1 EGHRLVLDALASGLQPEFVVIHDAALASSIGERLGTALAQLETDRVVRTPAHIVEQLSDTQTPQGVIAVLAHEPLPLPPAPTLVLVCDGISDPGNLGTLLRSAAGSGVDAVLLLPGCSDPWGLKTLRSGMGAQFRVPLQHMGTWADTSDLLADWSCTALAADAGGELAHDEVDWRRGAALIVGSEAHG 188
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A7S0LQQ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ5_9EUKA) HSP 1 Score: 159 bits (401), Expect = 4.900e-41 Identity = 89/208 (42.79%), Postives = 124/208 (59.62%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAAL-ETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARGEA 621 R +R RD G ++ EGHRL+ D ++ G+S V++S EAL A G RL +L E L A+ +A+AP ++ DT QGVV ++++P L LP + VLV D I DPGNLGTL+R+AAG G + +L C D W K +RA MGA RLP + + +AE A +++ G AA+ ++ DW PSALVVG+EA G A Sbjct: 45 RKLQAKRARDKSGLMILEGHRLLTDALDAGYSADFVLLSEEALHAPEGARLARSLREVLRAEQLAIAPQSLIAELSDTQTPQGVVGMLQQPRLALPESPSFVLVLDRISDPGNLGTLLRSAAGAGVESALLLSGCTDPWGLKALRAGMGAQLRLPLVEVRGYAEAAGMLRRWGCHGVAADARGETDYWAVDWRQPSALVVGSEAHGLA 252
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A8J5X903_DIALT (SpoU_sub_bind domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X903_DIALT) HSP 1 Score: 157 bits (398), Expect = 9.910e-41 Identity = 91/208 (43.75%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLP--LPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDA-DWTSPSALVVGAEARG 615 R RR R+ G +L EG RLV D ++ G V+V+ L PG LQ L LPA VV++A + C TV+ QG+VA V P LP VLV D + DPGN+GTLVR AAG G D VV G C D W+PK +R++MG +FRLP + + WA++ +Q G+R+ AA+GG + S + A DW +P A+V+G+EA G Sbjct: 27 RRLESRRHRERDGLLLLEGLRLVTDALDAGFCAETVLVAEALLAQQPG--LQRVLAALPAGVVSLADEAALAAACTTVSPQGIVAAVRMPERTGALPDAASLVLVLDNLSDPGNVGTLVRGAAGFGCDAVVALGACADAWSPKALRSAMGGTFRLPIVPAQEWAQLRAQLQRAGLRVLAADGGVAASDYAAVDWRAPLAVVIGSEATG 232
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A0P6YEI2_9CHLR (SpoU_sub_bind domain-containing protein n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0P6YEI2_9CHLR) HSP 1 Score: 147 bits (370), Expect = 4.560e-37 Identity = 86/206 (41.75%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHS-PALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 R H+RR R+ GK+L EG RLV D + G + AL S +A R A L + EV+Q DTV QG+VA+ ERP L P + +L+ D ++DPGNLGTL+R AAG G +GV+L VD W+PK +RA MGA FRLP +W E+A+ + G+ +Y A+ ++ +FD DWT+P+ L+VG E G Sbjct: 16 RALHRRRMREREGKILLEGARLVHDAFQAGVAFEALFYTSDQAAHIPEALRSCAWLVS----------EEVMQALSDTVTPQGIVAVAERPQLAWPTSATLLLIADNVRDPGNLGTLLRAAAGAGVEGVLLPKGTVDVWSPKVLRAGMGAHFRLPVRAGLTWEEIAQAVN--GLTVYVADARGAVRYFDVDWTAPTVLIVGGETEG 209
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: R7QT73_CHOCR (SpoU_sub_bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT73_CHOCR) HSP 1 Score: 147 bits (370), Expect = 1.380e-36 Identity = 92/211 (43.60%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADV--VAVAP---AEVVQRC-CDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 R+ +RR RD +L EG RL+ D + +P + S + LR S AA+ L ADV AP AE + R C+TV+ QGVVA++ERP LPLP + LVCD ++DPGN+GTL+R+AAG G D V++T C D W K +RA MGA FRLP +SW EV +++ G + A+GG + DW P+A+VVG EA G Sbjct: 47 RSLLRRRHRDKNNLILLEGQRLIEDALSASFAPHQLFYSDKLLRRS------AAMGALLADVRRSGCAPMLVAEPIMRSLCNTVSPQGVVAVLERPALPLPDSGTLALVCDEVRDPGNVGTLLRSAAGAGVDAVLMTHGCADPWGLKVLRAGMGAHFRLPVQVDQSWDEVMQVVHKWGCEVSVADGGGE-DYAKVDWCGPAAIVVGGEANG 250
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A1X6PKW2_PORUM (SpoU_sub_bind domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW2_PORUM) HSP 1 Score: 147 bits (372), Expect = 2.870e-36 Identity = 92/204 (45.10%), Postives = 120/204 (58.82%), Query Frame = 1 Query: 13 KRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALET---LPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 +RR R+ G +L EGHRLV D + G PA + + A R + RL AL T + D + VA +VV CDTV QGVVA+V RP + +L DG+ DPGN+GTL+R+AA GADGVVLT C D W+PK +RA MGA RLP L EV + RG+R+ A+G A +++ DW +P+ LVVG EA G Sbjct: 108 RRRMREREGLLLLEGHRLVVDAL-GAARPAAPVHTVVATRQAAA-RLWPALSTATGVARDALLVATPDVVASVCDTVTPQGVVAVVGRPSTTVVPGSTLLLALDGVADPGNVGTLLRSAAAAGADGVVLTKGCADVWSPKALRAGMGAQLRLPVLAGLEPEEVVAWARGRGLRLRVADGSAVMAYDGVDWAAPTVLVVGGEAEG 309
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A7C7US29_9CHLR (RNA methyltransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7US29_9CHLR) HSP 1 Score: 143 bits (360), Expect = 1.420e-35 Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 1 Query: 1 RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 R+ H+RR R + EG RLV + ++ G P LV +P+ G L A +E LP + V +V++ DTV+ QG++A+V LP P VLV D ++DPGNLGT++R+A GA+ V+LT VD ++PK VR +MGA F LP SW+E+AE ++ R + + AEG +++ DWT PSAL+VG+EA G Sbjct: 13 RSLHRRRVRHRERNFVVEGLRLVEEALKAGVVPTLVFFTPDLGSGRRGRELLAVIEDLPGECFVVTD-KVMRALSDTVSPQGILAVVPFLGLPFPENPWLVLVVDRVRDPGNLGTILRSAEAAGANQVILTPATVDVYSPKVVRGAMGAHFYLPIATRASWSEMAEALEGRQILLAEAEG--EKVYYEVDWTKPSALIVGSEAEG 214
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Match: A0A7S0BQI0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQI0_9RHOD) HSP 1 Score: 142 bits (357), Expect = 3.600e-35 Identity = 81/201 (40.30%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 16 RRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEAL-RASPGPRLQAALETLPADVVAVAPAEVVQRCCDTVASQGVVALVERPVLPLPATLQTVLVCDGIQDPGNLGTLVRTAAGLGADGVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWAEVAELMQARGVRMYAAEGGASLSHFDADWTSPSALVVGAEARG 615 RR R++ G + EG RLV D + + P ++ V AL + G +Q + TLP D V + E++Q DT QGV A+ ++ PA VL D + DPGN+GTL+RTAAG GA GV LT D + KT+RA MGA FR+P L W+++ + RG+ + A+G + H++ DW PS LV+GAEA G Sbjct: 33 RRVRENEGLIFVEGTRLVLDAVAAQNEPEVLFVGERALNKGDYGVAMQKLVSTLPNDRVVYSSEEIMQHLTDTENCQGVAAVFKKKKAMAPAQPSLVLALDRLSDPGNVGTLIRTAAGAGAHGVFLTKGSADPFGLKTLRAGMGAQFRIPVLPNWEWSDIESYSRERGLSLVVADGSGDVPHYNYDWKVPSVLVIGAEADG 233 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7936.16902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7936.16902.1 >prot_L-elsbetiae_contig7936.16902.1 ID=prot_L-elsbetiae_contig7936.16902.1|Name=mRNA_L-elsbetiae_contig7936.16902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp RTFHKRRTRDDGGKVLAEGHRLVCDLIEGGHSPALVIVSPEALRASPGPRback to top mRNA from alignment at L-elsbetiae_contig7936:853..4343- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7936.16902.1 ID=mRNA_L-elsbetiae_contig7936.16902.1|Name=mRNA_L-elsbetiae_contig7936.16902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3491bp|location=Sequence derived from alignment at L-elsbetiae_contig7936:853..4343- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7936:853..4343- >mRNA_L-elsbetiae_contig7936.16902.1 ID=mRNA_L-elsbetiae_contig7936.16902.1|Name=mRNA_L-elsbetiae_contig7936.16902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig7936:853..4343- (Laminarionema elsbetiae ELsaHSoW15)back to top |