mRNA_L-elsbetiae_contig7929.16893.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7929.16893.1
Unique NamemRNA_L-elsbetiae_contig7929.16893.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.340e-107
Identity = 158/205 (77.07%), Postives = 180/205 (87.80%), Query Frame = 1
Query:   88 MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFDKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFIAKHAK 702
            MAPKL L YFD  GAAEPIRWALE+G LEW DKRLT+EEFG LKPSLPNGQVPVL +DGF+L QSMA+LRYVGKLGGL P+DDLAAAK DAIMD  TD  IN+RPSFMEKD AKKMEMRA+LAA++IPKWL+NMEKQLSST+GT+FFDKMTVADIM + RLH ++ GVLDGIPTTI DSYP L A+  ++V+EPK+AAF+AKHAK
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFDKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 2.190e-96
Identity = 146/206 (70.87%), Postives = 174/206 (84.47%), Query Frame = 1
Query:   88 MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFDKMTVADIMTSLRLHHLKMGVLDGIPTTIFDS-YPGLSALYSSIVAEPKIAAFIAKHAK 702
            MAPKL LTYFD+ GAAEPIRWALEQ G EW DKRLT EEFG +KPSLPNGQ+PVL+VDG+ LPQSM +LRYVGKLGGL+P+DDL AAK DA++D++ DF INVRP++ EKD AK++EM  +LA +YIPKWLAN+EKQL++TEG YF +KM+VADIM + RL  L+ G  +G+PTTIFDS YP L+ALY SIV EPKIAAFIAKH K
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAEKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 5.200e-59
Identity = 108/202 (53.47%), Postives = 132/202 (65.35%), Query Frame = 1
Query:   88 MAP--KLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFD-KMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAF 684
            MAP   LTLTYFD  G AEP+R AL   G  W DKR++  EF  LKP LPNGQ+P+L+V G  LPQS A LRYVGKL GLYP D L AA  DA +DS  D  + + P+  +KD  ++MEMR  L  D++P WL N+EK L++  GTYF   K+++ DI    RL  LK G LDGIPT+I D YP LSAL   + AEP IA +
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKY 202          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 3.620e-57
Identity = 96/201 (47.76%), Postives = 134/201 (66.67%), Query Frame = 1
Query:   88 MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFD-KMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFI 687
            M PKL L+YFD+    EP+R AL   G  W DKR++KEEF  +KPSLP  Q+P L+V G  +PQS+A +RY+GK+GGLY  D + AA  DA M++  D   ++RP+  E+D AKK+EMR  +  +Y+P WL N+E+ L +  G+YF   K+++ DI    RL+ LK G LDGIP TI D +P LSAL  S+++E KI  ++
Sbjct:    1 MGPKLILSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYL 201          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 4.270e-52
Identity = 93/206 (45.15%), Postives = 133/206 (64.56%), Query Frame = 1
Query:   88 MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFF-DKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFIAKHAK 702
            MAP + LTYF+     EP+R AL Q G+EW D R+  E++  LKP+LP  Q+PVL+VDG  +PQS+A+LRYVGK+G LYPTD + AA  D+  D+ +D    +R    EKDA KK ++R +L    +P WLAN+EK L    G YF  DK+++ DI    RL+ L  G  +G+P+T+ D  P +S+L   ++AEP+I A++ +  K
Sbjct:    1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPK 205          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 5.880e-50
Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 1
Query:  364 MDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFDKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFIAKHAK 702
            MD +TD+ IN+RPSFMEKD AKKMEMRA+LAA+YIPKWL+NMEKQLSST+GT+F  +MTVAD+M + RLHH+K GVLDGIPTTI DS P L ALY ++V+EPK+AAF+AKHAK
Sbjct:    1 MDCATDYYINIRPSFMEKDEAKKMEMRADLAANYIPKWLSNMEKQLSSTDGTFFDGQMTVADMMIAYRLHHMKNGVLDGIPTTIADSCPSLCALYDAVVSEPKVAAFLAKHAK 113          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 4.070e-49
Identity = 93/207 (44.93%), Postives = 131/207 (63.29%), Query Frame = 1
Query:   88 MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFF-DKMTVADIMTSLRLHHLKMGVLD-GIPTTIFDSYPGLSALYSSIVAEPKIAAFIAKHAK 702
            MAP + LTYFD+    E +R AL Q G+EW D R+T EE+  LKP+LP  Q+PVL+VDG  +PQ+ A+LRYVGK+G LYPTD + AA  D+  D+  D   ++R  F EKDA  K ++  +L    +P WLAN+EK L    G YF  DK+++ DI    RL+ L  G  D  +P+ I + +P LS+L   ++AEP+I A++ +  K
Sbjct:    1 MAP-MKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPK 206          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 3.480e-46
Identity = 88/201 (43.78%), Postives = 122/201 (60.70%), Query Frame = 1
Query:  106 LTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQL--SSTEGTYFFDKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFIAKHAK 702
            L+YFD  G AEPIR A   GG+++ D R  +E++  LKP  P G VP L +      QS A+LRY GKL GLYPTD + A  VD I+D+  D  ++V+P+  E+D  KKMEMR  LA + +PKWL    K +  + + G    D +T+AD+     +  L  G+LDGIP TI + +P ++AL   + A+ K+ AF AKHAK
Sbjct:    5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFEAKHAK 205          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 9.470e-44
Identity = 82/193 (42.49%), Postives = 124/193 (64.25%), Query Frame = 1
Query:  100 LTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFF-DKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKI 675
            +TLTYFD+ G AE IR A   GG+ + D+R++++EF  +K  LP  Q+P+L VD    PQS A+LRY GK+GGLYP+D +AAAKVDA++D   D    +RPS  E +A +K+ MR EL+   +P WL  +E+ L     T+F  +++T+ D++   R+  L+ GVL GIP TI  ++  + A   ++ + PK+
Sbjct:    4 ITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKV 196          
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Match: A0A7S1XAS3_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XAS3_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 2.270e-43
Identity = 93/198 (46.97%), Postives = 121/198 (61.11%), Query Frame = 1
Query:  100 LTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNGQVPVLDVD-GFQLPQSMAMLRYVGKLGGLYPTDD-LAAAKVDAIMDSSTDFGINVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSST-EGTYFFDKMTVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAF 684
            + LTYF + G AEPIR AL  GG+++ D RL +  + DLK S P G +P L +D G QL QS A+LRY GKLGGLYP DD +AA +VD  + ++ D    +RP+  EKD  KKM MR  LA +  PKWL+  + QL S   G      MTVAD+     L +LK G+LDGIP TI + Y  L  LY ++    K+AA+
Sbjct:    1 MKLTYFPIKGVAEPIRLALVAGGVDFEDNRLEQGTWPDLKASTPFGALPTLHLDSGEQLAQSDALLRYAGKLGGLYPKDDDVAAMRVDMWLGAADDVQGAIRPTLFEKDDEKKMAMRKVLADETFPKWLSIFDSQLESNGSGFLVGTSMTVADLKLFCILDNLKSGILDGIPPTITEPYAKLQKLYDTVAKHEKVAAY 198          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7929.16893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRV2_9PHAE1.340e-10777.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1N8E8_9PHAE2.190e-9670.87Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
B1N8E7_9PHAE5.200e-5953.47Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E6_9PHAE3.620e-5747.76Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
D8LHF0_ECTSI4.270e-5245.15Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D7FHE9_ECTSI5.880e-5073.45Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
D8LK37_ECTSI4.070e-4944.93Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A061SAH2_9CHLO3.480e-4643.78Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
D7FPV3_ECTSI9.470e-4442.49Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
A0A7S1XAS3_9CHLO2.270e-4346.97Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7929contigL-elsbetiae_contig7929:4679..8059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.0
Seed ortholog evalue1.8e-38
Seed eggNOG ortholog157072.XP_008864522.1
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
EggNOG free text desc.glutathione transferase activity
EggNOG OGsKOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Exons7
Model size1266
Cds size618
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816877.485121-UTR-L-elsbetiae_contig7929:4678..52391622816877.485121-UTR-L-elsbetiae_contig7929:4678..5239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7929 4679..5239 -
1691683881.0592234-UTR-L-elsbetiae_contig7929:4678..52391691683881.0592234-UTR-L-elsbetiae_contig7929:4678..5239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7929 4679..5239 -
1622816877.5773427-UTR-L-elsbetiae_contig7929:7972..80591622816877.5773427-UTR-L-elsbetiae_contig7929:7972..8059Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7929 7973..8059 -
1691683881.142904-UTR-L-elsbetiae_contig7929:7972..80591691683881.142904-UTR-L-elsbetiae_contig7929:7972..8059Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7929 7973..8059 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816877.497798-CDS-L-elsbetiae_contig7929:5239..54101622816877.497798-CDS-L-elsbetiae_contig7929:5239..5410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 5240..5410 -
1691683881.0712428-CDS-L-elsbetiae_contig7929:5239..54101691683881.0712428-CDS-L-elsbetiae_contig7929:5239..5410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 5240..5410 -
1622816877.507967-CDS-L-elsbetiae_contig7929:5929..59901622816877.507967-CDS-L-elsbetiae_contig7929:5929..5990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 5930..5990 -
1691683881.0798464-CDS-L-elsbetiae_contig7929:5929..59901691683881.0798464-CDS-L-elsbetiae_contig7929:5929..5990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 5930..5990 -
1622816877.5178974-CDS-L-elsbetiae_contig7929:6346..63871622816877.5178974-CDS-L-elsbetiae_contig7929:6346..6387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 6347..6387 -
1691683881.088636-CDS-L-elsbetiae_contig7929:6346..63871691683881.088636-CDS-L-elsbetiae_contig7929:6346..6387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 6347..6387 -
1622816877.5288806-CDS-L-elsbetiae_contig7929:6759..68751622816877.5288806-CDS-L-elsbetiae_contig7929:6759..6875Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 6760..6875 -
1691683881.0978801-CDS-L-elsbetiae_contig7929:6759..68751691683881.0978801-CDS-L-elsbetiae_contig7929:6759..6875Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 6760..6875 -
1622816877.5469785-CDS-L-elsbetiae_contig7929:7315..74081622816877.5469785-CDS-L-elsbetiae_contig7929:7315..7408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7316..7408 -
1691683881.1076646-CDS-L-elsbetiae_contig7929:7315..74081691683881.1076646-CDS-L-elsbetiae_contig7929:7315..7408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7316..7408 -
1622816877.5578017-CDS-L-elsbetiae_contig7929:7684..77911622816877.5578017-CDS-L-elsbetiae_contig7929:7684..7791Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7685..7791 -
1691683881.1212628-CDS-L-elsbetiae_contig7929:7684..77911691683881.1212628-CDS-L-elsbetiae_contig7929:7684..7791Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7685..7791 -
1622816877.5676262-CDS-L-elsbetiae_contig7929:7943..79721622816877.5676262-CDS-L-elsbetiae_contig7929:7943..7972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7944..7972 -
1691683881.132341-CDS-L-elsbetiae_contig7929:7943..79721691683881.132341-CDS-L-elsbetiae_contig7929:7943..7972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7929 7944..7972 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7929.16893.1prot_L-elsbetiae_contig7929.16893.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7929 5240..7972 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7929.16893.1

>prot_L-elsbetiae_contig7929.16893.1 ID=prot_L-elsbetiae_contig7929.16893.1|Name=mRNA_L-elsbetiae_contig7929.16893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
MAPKLTLTYFDMGGAAEPIRWALEQGGLEWTDKRLTKEEFGDLKPSLPNG
QVPVLDVDGFQLPQSMAMLRYVGKLGGLYPTDDLAAAKVDAIMDSSTDFG
INVRPSFMEKDAAKKMEMRAELAADYIPKWLANMEKQLSSTEGTYFFDKM
TVADIMTSLRLHHLKMGVLDGIPTTIFDSYPGLSALYSSIVAEPKIAAFI
AKHAK*
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mRNA from alignment at L-elsbetiae_contig7929:4679..8059-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7929.16893.1 ID=mRNA_L-elsbetiae_contig7929.16893.1|Name=mRNA_L-elsbetiae_contig7929.16893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3381bp|location=Sequence derived from alignment at L-elsbetiae_contig7929:4679..8059- (Laminarionema elsbetiae ELsaHSoW15)
CTGGCGACCTACCTCGACGCACTCTCCTTCTCTCCTTCGCACACACGCAC CGCAACCCTAGCTCCAGCAGTTTACCTACCTCAAGAGATGGCTCCTAAAC TCACCCTCACGTACTTGTGAGTGTTGCAGGAGCTGGGAGAAGTTAGCGTT TTTGCACTTTGCCGCTTTATGCCATTGTTTGTTCTCTGCGGTCCTCTCCG CGCTGTTCGTCCATGTTAACATGTAACCATGCCCACTCCGCTTTGTTTGA TCCTGGCCTCGGCTGAAGTGACATGGGTGGTGCCGCGGAACCCATCCGCT GGGCCCTGGAGCAAGGAGGGCTTGAATGGACCGACAAGCGCCTGACCAAG GAAGAATTTGGGGATCTCAAGCCAAGTGAGTTGATTTTGGGGCAGATCTT CGTTGCGTCCCGCAGCAGTCCGCGTGATCGATTATGCATAGCGAGGGAAA GCCCGAGCAACCGTAACAGCGTAACTTGAGAAGCTCTCTCCACCCGCCCG CCAGATCTGCACAGCGAGGATTATACCTTCTACGTAGTCTTATGTAGGCA AAGTCCGTTTCTGCCGAAATTGGAAAAATGCTGATCGCATTATTTTGGTG ACTCCACCGTATGCCCCCCCCCCCCGTCTCCGCAACTGCTGTGTGCGAAA GGCCTGCCTAATGGACAGGTGCCCGTCCTTGATGTAGACGGCTTCCAGCT GCCCCAGAGCATGGCGATGCTGCGCTACGTCGGCAAGCTCGGGGGTGAGA CGCTTGGCTACAGTGGATATGAAATGACCTCGTTTACAGTGAACATGCAA ATTTGCAAATTTGCGCTCAAAAGCCGCGATTTTCCGCGCGTTTTTTTTCT CCGGAGTGTAGTATGTGTGTTGAAGATTCACAAACTACAGCTCTGTTTCG CGACGGCACCCTGTTCTCGCTCTTGCGTCGCAGTGGCCGTTTTGGTGTGG TGCTGCATCGCTGCCACAACAGGGTTATGTTGTAAAGTGCTTTCCTGTGT GCTTGCTGCTTGACTGCGTGCGTGCGGGAACCATGTGCCGCGAAAACTGT TGTTCCCCCGGCGATTTTGCAAAAGGTGTGGATCCTCTCGACAACAGCGT TTGCCCGTTTTGAATTATTCATGCTGTCTGGTTGCTGGTTTTGTGTGTTA TCCGCGTCGATGTACCGACGTGCTTCTGCTGCAGGGCTCTACCCCACCGA TGACCTCGCCGCCGCCAAGGTCGATGCCATAATGGACTCCTCCACCGACT TCGGCATCAATGTCCGCCCTTCGTTCATGGAGAAAGACGCGGCCAAGAAG GTGAATACGCACAAGGGACGCACCCAGAGTAAAACTGAATGTCGTGAAGC CAACGCGTGGGGCCGAATGGTGTACTGGCGTGTGCGCGGGGATGTTGGGT CCGTAACAGGTGTTCGCAGGGTCGCTTTCGTTTTATCTAGCACCTAAATA ACTCTGCGGATGCTGATGCAACATGTGTCGAGCAAAAGGTTATTGCCCTT GCTCTCGTGTCCCTTCGTAGCTACTTTTTTTTTGTCTCGCCGTGGTTTGT CGCTTGTTGCTGGCGAGGGGCTGGAATTGGACTCTTGTGTTGTGATTCCC TTGTTTTCGCAACACCGATCGTGTAATGGTTTTGCTGTGACCAATTGTTT TGTTTTTTTCGCGTATCCGCAGATGGAAATGCGCGCGGAACTTGCGGCCG ACTACATCCCGAAGTGAGTGTCTGCAACAAAAATATGATTTCTCGGCACG GACAACAGCGATTCCTCGCGTACATACATACTTCTATGTGATTTGTGTTT GTTCTATTATCATCAGTCGGGTACTCAATTTCCTCCACTCTTGCTCGTGG CGCTTCGATGCCGTCGGCTTGGAAATGTGTCGTGGGCGCTTTATCTAGCA GTAACGCTAGAAAGGTCGTCAGCTGCAACACGCTCTGCGTGCAGTCCTGG GTGACAGAGCTCACGAAGATTTGCAAGGCTCATATTTCCGCTCTATTATT TCCACCCGGGCTTTACCAACACTTACCACCGACGCTGTATGTTTTTTCGT CTCAATCCCCACACAAAAGGTGGCTCGCGAATATGGAGAAGCAGCTATCA TCGACCGAAGGGACCTACTTCTTCGACAAGGTGCCCGCGCTTGGAGCTGT CCTAGAATCCTACCCCTTCGTGGGCATTTCGTTGGTTGCATGTAGAAGAA AATTGTTGTGGGGATTATGCTTGACTAAATATAAACAGCTCGCTGTCGGT CAGGTTTGTGAGCGCTCGTCCTTTTCCTAGGTAATTTTTGCGCTTTAACG GATAGCCCTGACGTCAAGCGTGGTTTGGTGGGTGCTTGCTTTGTATATGA AGCACGACAGTGATGCCAACATCTGTGTCGAAACAGCATGACTGACCCGT GTCGATCTGAAAAATCGACCAGCTTCTAACTTTCTTGGCTGTGTCCTCCT CACGGCGGTGGTGTGTTGGACGATAATGACGGTTTCTCCTCTTTTCTGAG GTGGATCGCATGGGCAAAATAGCTGATCGTCGCCAAGCAACCCTTGTTGC CAACATCCCCGACCCAGCAGCGCCTGCGTTTTGTGTAGGACGTGTTTTGT TGTATGTCCCTCCACATAAATATCCATACCCATTTTCGCAATGTCGCAGA TGACGGTGGCGGACATCATGACCTCTTTGCGCCTGCACCACCTCAAGATG GGTGTTCTCGACGGCATCCCCACCACGATCTTCGACTCCTACCCCGGCCT CAGCGCACTGTACTCCTCCATCGTCGCGGAGCCCAAGATCGCTGCGTTCA TCGCCAAGCACGCCAAGTGAATGGACAAGCACGCCAAGTGAATGGACACA CCTTGCGCTGATTCAGTACAATGTTTCGCTACATACGTAGAAGGCGGGCG CATCACGTTGCTAAGCGTACTCGAAGCACTGCGAAGCACTGCAAAGTATC CTAACGAGTTATCAACGACCCTGCCGGCTCATTTGCCGCATGAGTGCGGC CGACCCGTACCAACTCCTAGCAGAGGGGGGGCGTGTGCGCCTGCTGTGCA TTTCCGTGAGTGAGTGTGTTTGTATTTTGTACTCTTTTAATTTGATGTGT TGTGTCATGTCGTGTGTGCGCACACCCATCTCGTATCATGGGCAATGGTG GTGGTGTAGTGGGGTGATTTGTGGTTGAAGCTGTCGGTGCTCGTTTTTGG CGGTAATAGATGTAGTGTTAGGGGGTTGTGGCTGTATGTAGCACATGGCT AGCGGTGGAAGCTGCTCGCCCATAGAAATACGGCTGCATAGTCGAGGCAG GCAACATACTCCACGCCTTACAGATCTTGTGTCGGCGTTTCCTCCGTTGT TTTCGGCGTTCTCGTGAATGGTGCGTGCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7929:4679..8059-

>mRNA_L-elsbetiae_contig7929.16893.1 ID=mRNA_L-elsbetiae_contig7929.16893.1|Name=mRNA_L-elsbetiae_contig7929.16893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig7929:4679..8059- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCCTAAACTCACCCTCACGTACTTATGGCTCCTAAACTCACCCTC
ACGTACTTTGACATGGGTGGTGCCGCGGAACCCATCCGCTGGGCCCTGGA
GCAAGGAGGGCTTGAATGGACCGACAAGCGCCTGACCAAGGAAGAATTTG
GGGATCTCAAGCCAATGACATGGGTGGTGCCGCGGAACCCATCCGCTGGG
CCCTGGAGCAAGGAGGGCTTGAATGGACCGACAAGCGCCTGACCAAGGAA
GAATTTGGGGATCTCAAGCCAAGCCTGCCTAATGGACAGGTGCCCGTCCT
TGATGTAGACGGCTTCCAGCTGCCCCAGAGCATGGCGATGCTGCGCTACG
TCGGCAAGCTCGGGGGCCTGCCTAATGGACAGGTGCCCGTCCTTGATGTA
GACGGCTTCCAGCTGCCCCAGAGCATGGCGATGCTGCGCTACGTCGGCAA
GCTCGGGGGGCTCTACCCCACCGATGACCTCGCCGCCGCCAAGGTCGATG
CCATAATGGACTCCTCCACCGACTTCGGCATCAATGTCCGCCCTTCGTTC
ATGGAGAAAGACGCGGCCAAGAAGGGCTCTACCCCACCGATGACCTCGCC
GCCGCCAAGGTCGATGCCATAATGGACTCCTCCACCGACTTCGGCATCAA
TGTCCGCCCTTCGTTCATGGAGAAAGACGCGGCCAAGAAGATGGAAATGC
GCGCGGAACTTGCGGCCGACTACATCCCGAAATGGAAATGCGCGCGGAAC
TTGCGGCCGACTACATCCCGAAGTGGCTCGCGAATATGGAGAAGCAGCTA
TCATCGACCGAAGGGACCTACTTCTTCGACAAGGTGGCTCGCGAATATGG
AGAAGCAGCTATCATCGACCGAAGGGACCTACTTCTTCGACAAGATGACG
GTGGCGGACATCATGACCTCTTTGCGCCTGCACCACCTCAAGATGGGTGT
TCTCGACGGCATCCCCACCACGATCTTCGACTCCTACCCCGGCCTCAGCG
CACTGTACTCCTCCATCGTCGCGGAGCCCAAGATCGCTGCGTTCATCGCC
AAGCACGCCAAGTGAATGACGGTGGCGGACATCATGACCTCTTTGCGCCT
GCACCACCTCAAGATGGGTGTTCTCGACGGCATCCCCACCACGATCTTCG
ACTCCTACCCCGGCCTCAGCGCACTGTACTCCTCCATCGTCGCGGAGCCC
AAGATCGCTGCGTTCATCGCCAAGCACGCCAAGTGA
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