mRNA_L-elsbetiae_contig7920.16880.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: D8LEK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK6_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 2.380e-177 Identity = 250/275 (90.91%), Postives = 261/275 (94.91%), Query Frame = 1 Query: 1 MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 MSS+ KAPPTTQEILDKSLKRALGGG AGA AMGINV TL+WMRTTINYQLRHGGGTMDAFRTLYSQGG+ RFYRGVGPALIQGPMSRFGDTAANTGVLALMESY+ TK+LP+ KT+ ASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVK GPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSG+KK ARNG IGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAV+DV+AKDGLVGLFGRGLKTKI+ANGMQGLM Sbjct: 1 MSSTSPKAPPTTQEILDKSLKRALGGGFAGALAMGINVGTLMWMRTTINYQLRHGGGTMDAFRTLYSQGGIGRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYESTKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVRDVIAKDGLVGLFGRGLKTKIMANGMQGLM 275
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA) HSP 1 Score: 397 bits (1021), Expect = 2.840e-137 Identity = 194/275 (70.55%), Postives = 233/275 (84.73%), Query Frame = 1 Query: 1 MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 M+S+ +++ P+ E+L+K+L++ALGGG AGA+AM +NV TL+W+RT +NYQ RHG T A LY +GG+ RFYRGV PAL+QGP+SRFGDTAANTGVLAL+ES D TK LP+ VKT+ AS AAALWRI LMP+DTTKTIMQVEGK GFPAL KK K GP+VLYHGA+AAS+AT VGHYPWFFTYNYLQERIPK+ + ++K ARN IGF SS+VSDTCSNSIRV+KVYKQS TE VTY+QA K+V+A DG++GLFGRGLKTK+IANGMQGLM Sbjct: 1 MASASSQSAPSASEVLNKALRKALGGGLAGASAMVMNVGTLMWLRTAMNYQYRHGTSTRAAITHLYKEGGIPRFYRGVVPALVQGPLSRFGDTAANTGVLALLESMDSTKGLPVGVKTLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTEPVTYLQAAKNVIASDGVLGLFGRGLKTKLIANGMQGLM 275
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A7S2V2G3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G3_9STRA) HSP 1 Score: 378 bits (971), Expect = 1.070e-129 Identity = 187/275 (68.00%), Postives = 219/275 (79.64%), Query Frame = 1 Query: 1 MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 M+++ AK +T EIL K+ RALGGG AGA AMG+NV TLIW+RTT+NYQ R+G T +A + LY +GGV RFY+G PAL+QGPMSRFGDTAANTG LALM+SYD T++LP VKT+ AS AA+WRIFLMPVDT KT MQVEG +G L K K GPTVLYHGALAAS+AT VGHYPWF T+N L RIPK D KK RN FIGFC+S++SDTCSNSIRVVKVY+Q+H E V+YV AVK V+A+DGL GLFGRGLKTKI+ANGMQG+M Sbjct: 1 MATTTAKPQLSTSEILQKAANRALGGGIAGAMAMGVNVTTLIWLRTTMNYQYRYGTTTTEALKALYKEGGVLRFYKGYLPALVQGPMSRFGDTAANTGTLALMDSYDSTRNLPAAVKTVSASATAAIWRIFLMPVDTLKTTMQVEGSKGVGQLAAKFKAGGPTVLYHGALAASTATFVGHYPWFTTFNILNARIPKYDDLPKKLMRNAFIGFCASLISDTCSNSIRVVKVYRQTHPEKVSYVNAVKGVIAEDGLAGLFGRGLKTKILANGMQGIM 275
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A7R9YEQ5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEQ5_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.680e-126 Identity = 186/271 (68.63%), Postives = 225/271 (83.03%), Query Frame = 1 Query: 22 APP-TTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPK-QD-SGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 APP +TQ+IL+K++KRA GGGAAGAAAM INV TL+W+RTT+NYQ R+G GT+ A + LY++GG+ RFYRGV PAL+QGP+SRFGDTAANTGV+ LM+SYD TKDLP VKT GAS+AAA WRIFLMP+DT KT +QVEG++ L KKV GP VLY GALAA+SAT VGHYPWF TYN LQE IPK QD +KKF RN IGFCSSVVSDTCSNSIRVVKVYKQS+ E ++Y + V+ V+ +DG++GLFGRGL+TKI++NG+QG+M Sbjct: 37 APPLSTQDILNKAIKRASGGGAAGAAAMFINVGTLMWLRTTVNYQYRYGTGTVTALKKLYAEGGIPRFYRGVLPALVQGPLSRFGDTAANTGVMVLMDSYDSTKDLPAVVKTGGASLAAACWRIFLMPIDTVKTTLQVEGRQALSQLFKKVGNHGPHVLYAGALAAASATFVGHYPWFATYNTLQETIPKPQDHETLKKFGRNAMIGFCSSVVSDTCSNSIRVVKVYKQSNAEALSYPEVVRRVIKEDGVMGLFGRGLQTKILSNGLQGIM 307
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A7S1UFD4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFD4_9STRA) HSP 1 Score: 362 bits (930), Expect = 5.620e-122 Identity = 179/267 (67.04%), Postives = 213/267 (79.78%), Query Frame = 1 Query: 31 TTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPK--QDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 TT++IL K++KRA G GAAAM INV TL+WMRTT+NYQ R+G GT A R LY++GG+ RFYRGV PAL+QGP+SRFGDTAANTGV+ LM+SYD TKDLP VKT GAS+AAA WRIFLMPVDT KT +QVEG + L KV T GPTV+Y GALAA+SAT VGHYPWF TYN LQ IPK D +KKF RN IGFCSS VSDTCSNSIRVVKVYKQS+ E ++Y + V+ ++A+DG++GLFGRGL TKI++NG+QG+M Sbjct: 109 TTEQILQKAIKRASGXXXXGAAAMFINVGTLMWMRTTVNYQYRYGTGTFTAIRKLYAEGGIPRFYRGVLPALVQGPLSRFGDTAANTGVMVLMDSYDATKDLPTMVKTTGASLAAACWRIFLMPVDTVKTTLQVEGPKALKQLFSKVGTNGPTVMYSGALAAASATFVGHYPWFATYNTLQASIPKPKDDEILKKFGRNAVIGFCSSFVSDTCSNSIRVVKVYKQSNAEAISYPECVRRIIAEDGMMGLFGRGLTTKIMSNGLQGIM 375
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A4D9D3X0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3X0_9STRA) HSP 1 Score: 355 bits (911), Expect = 2.070e-120 Identity = 175/273 (64.10%), Postives = 210/273 (76.92%), Query Frame = 1 Query: 7 SSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 SS K P EIL KS RALGGG +GAAAMGINV L+W+RTT+NYQ R+G A +TLY+ GG+ RFY+G+ PAL+QGP SRFGDTAAN GV+ L++S+D+TKDLP+ VKT AS AA WRIFLMPVDT KTI QVEGK+GF L+ K+KT GP V+YHGALAA +A L+GHYPWF TYNYLQE +PK D K RN IGF SS +SDT SNS+RVVKVYKQ+++E + Y AV+ ++A DGLVGLFGRGL TKI ANG+QGL+ Sbjct: 12 SSMEKPKPNVGEILKKSAMRALGGGISGAAAMGINVGALMWLRTTVNYQYRNGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFDETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKTHGPGVMYHGALAAFAANLLGHYPWFATYNYLQENLPKTDDFKMKLCRNALIGFSSSAISDTVSNSVRVVKVYKQANSEHIAYPDAVRRIIAADGLVGLFGRGLSTKIFANGLQGLV 284
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A7S3V5E4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E4_9STRA) HSP 1 Score: 353 bits (907), Expect = 5.360e-120 Identity = 174/275 (63.27%), Postives = 211/275 (76.73%), Query Frame = 1 Query: 1 MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 MS + P T EILDK+ K AL GG AGA AMG NV L+WMRTT+NYQ R+G A +TLY+ GG+ RFYRGV PAL QGP+SRFGDTAANTGVL L+ S+D TKD+ + VKT+ AS AAA WRI LMP+DT KT MQV G F +V K+K GPTVLYHG+LA++SAT VGHYPWFFTYNYL E+IPKQD +++ R +GFCSS +SDTCSNSIR+VKVYKQS TE ++Y Q VK+V+A+ G+ GLF RGL+TKI+ANGMQG++ Sbjct: 1 MSKKTEETPATLSEILDKAAKSALRGGTAGACAMGANVACLMWMRTTVNYQYRNGTTFPVALKTLYADGGIPRFYRGVLPALAQGPLSRFGDTAANTGVLTLLNSFDSTKDMGVGVKTVCASAAAAAWRICLMPIDTVKTTMQVTGS--FSNVVNKIKASGPTVLYHGSLASASATFVGHYPWFFTYNYLSEKIPKQDDQLRELGRRAILGFCSSAISDTCSNSIRIVKVYKQSSTEAISYPQVVKNVIAESGVKGLFFRGLETKILANGMQGIL 273
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: F2USX5_SALR5 (MC family transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USX5_SALR5) HSP 1 Score: 352 bits (902), Expect = 3.080e-119 Identity = 171/275 (62.18%), Postives = 213/275 (77.45%), Query Frame = 1 Query: 1 MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 M++ PP+ QE+L K+ KRALGGG AGAAAM V TL+W+RTT+NYQ R+G T A + LY QGGV RFYRG+GPAL+QGP+SRFGDTAANTG+L L++SY+ T+ LP+ VKT+ AS AALWR+ LMP+DT KT+MQVEG +G L K+K GP VLYHG+LAA SAT VGH+PWF T+NYL IP+ + K AR IGFCSSV+SDT SNSIRV KV KQ+HT+ +TYVQAV++V++KDG+ GLF RGL T++IANGMQG+M Sbjct: 1 MATKDTSTPPSVQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQAHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMM 275
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A0L0FNE2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNE2_9EUKA) HSP 1 Score: 348 bits (892), Expect = 1.440e-117 Identity = 170/265 (64.15%), Postives = 208/265 (78.49%), Query Frame = 1 Query: 37 QEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPK--QDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 QEIL + KRA+GGG GA AMGINV +L+W+RTT+NYQ R+G T +AF+ LY +GG+RRFYRG GPAL QGP+SRFGDTAAN GVLAL++SYD T +LP+ VKT+ AS AAA WR+FLMPVDT KT MQVEG +G L K+ + GP VLY GA+AAS AT VGHYPWFF YN LQE++PK +D +KK RN IGFC+SVVSDTCSNSIRVVK KQ+ ++Y + VK V+ +DGL+GLFGRGLKT+I+AN MQG++ Sbjct: 19 QEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGML 283
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Match: A0A5J4Y5Q9_9CHLO (MC family transporter n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5Q9_9CHLO) HSP 1 Score: 351 bits (901), Expect = 1.450e-117 Identity = 170/270 (62.96%), Postives = 210/270 (77.78%), Query Frame = 1 Query: 16 AKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYQLRHGGGTMDAFRTLYSQGGVRRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYDDTKDLPIWVKTMGASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKTRGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGVKKFARNGFIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVKDVVAKDGLVGLFGRGLKTKIIANGMQGLM 825 AK P ++L ++ K+ALGGG G AAMGI V++L+W+RTT+NYQ RHG AF+TLY GGV RFYRG+ PALIQGP+SRFGDTAAN G L+L+ESY+ T L + +KT+ AS +AA +RI LMPVD TKTIMQVEGK GFPALV KVKT G VLYHGALAAS+AT VGHYPWFFTYN+L E +P+ D ++ R+ IGF +S +SDTCSNS+RVVK KQ+ T +TY + VK+V+ KDGL GLFGRGLKTKI++NG+QG+M Sbjct: 102 AKEPEAISDVLRRAGKKALGGGIPGMAAMGIQVLSLMWLRTTVNYQYRHGSSMTTAFKTLYKDGGVVRFYRGLAPALIQGPLSRFGDTAANAGTLSLLESYETTAHLNVGLKTLVASASAATFRILLMPVDATKTIMQVEGKNGFPALVAKVKTGGLPVLYHGALAASAATFVGHYPWFFTYNFLNEHLPQYDDLPRRLMRSAVIGFSASAISDTCSNSVRVVKTSKQTATTSITYPEVVKEVIQKDGLTGLFGRGLKTKILSNGLQGIM 371 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7920.16880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7920.16880.1 >prot_L-elsbetiae_contig7920.16880.1 ID=prot_L-elsbetiae_contig7920.16880.1|Name=mRNA_L-elsbetiae_contig7920.16880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp MSSSPAKAPPTTQEILDKSLKRALGGGAAGAAAMGINVVTLIWMRTTINYback to top mRNA from alignment at L-elsbetiae_contig7920:524..9084+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7920.16880.1 ID=mRNA_L-elsbetiae_contig7920.16880.1|Name=mRNA_L-elsbetiae_contig7920.16880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8561bp|location=Sequence derived from alignment at L-elsbetiae_contig7920:524..9084+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7920:524..9084+ >mRNA_L-elsbetiae_contig7920.16880.1 ID=mRNA_L-elsbetiae_contig7920.16880.1|Name=mRNA_L-elsbetiae_contig7920.16880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig7920:524..9084+ (Laminarionema elsbetiae ELsaHSoW15)back to top |