mRNA_L-elsbetiae_contig792.16879.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 698 bits (1802), Expect = 8.990e-244 Identity = 378/650 (58.15%), Postives = 439/650 (67.54%), Query Frame = 1 Query: 1 TVNGTLFACNGESSAYFVGNGTWNTTYTSNDGDELDIDVFYATYQNQLWVRHLQPHMDPSLYNALNETTIRLNITCGGELEDTA---GCIEFTANFTEATPYNATDAFEFEDECFHGFSSGAQAQSVQVHAASPVGPARSASLGTGRALILAGKADQGLPWSEGFYANGSQKDDEFWGEWWTTTNSRYNLTAEDDD-ANRIEGIGSLY-FYCPTTDQTGCG---------------VRPCGTWGLRNAGTETCPN-----EIEEVNFCCPAQCGTCGGPGCGSRPGG----QSCCVGPLLDSGVTCDDNGVAPCIMNTLAGETCSDGVVGATSCRSTKTREHRTTNLTPALLVFFAPPVTENEENGCNGTVSEFWDPRVGVWLSTFQTLDGESHDLDMFYLNMVDGVNELWVTEIESWMAPSLYNQLQHNYVKLTVTCPEDNVAVQSCVIFKPTFTNWSPEVDGAMAGYRFSDPALPSFDIPAAVPNSPGDVILTTNNGVVTKTGAETETFCNGDSAEYFGEDGKWYNQASSTTLALRLFLKSDGAPHELRHVFYLRERDLYAATIQSVWEPNLRSLLANRIVRMKVWCTNDERAQYLFLRVSGEPAACDDIDELCTDVITGG--ALQLIPTFKQCATTVSAAYLVGWLS 1857 T NGTL +CNGESSAY VG+ TWNTTY NDGD+L +DVFYATYQNQLWVRHLQPHMDPSLY ALN+TTIRLNITC ++ GC+EFT NFTEATPYN T+ +EF D+C HGFSSG Q QSV VHAASP+GP SASLG G ALILAGKADQG PWSEGF +GS+KDDEFW +WW +SRY T E DD +GI YC + + C PC G N E+E A+ CG GS+ G + C GP C M + DG + S R+ T E R +T L ENEE C G+ ++FWDP+ G W STF+T+DGESHDLDMFY+++VDGVNELWVTEIESWMAPSLYNQLQ+NYVKL +TCPEDNV V SCVIF+PTFTNWSP+VDGA AGYRFSDPALPSFDIP AVPNSPGDV+LTT+N VVT+TGA TET+CNGDSAEY GEDG WYN+ F+KS+G HEL+HVFY +RDLYAATIQ+ WEPNLR LL NRIVR++V+CTNDERA+YL++RVSGE A CDDI++LCT+V G ALQL P F A +SAAYL+ W S Sbjct: 11 TTNGTLHSCNGESSAYHVGDDTWNTTYIGNDGDKLGVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGPPWSEGFNEDGSRKDDEFWSDWWAVVDSRYGSTEESDDPCTEYDGIVDADGVYCCFDEDSTCDSGDXXXXXXXXXXXXXAPCELLDYTYLGCFKDKNSNSIMELEAKRSDMTAE--LCGELCAGSKQFGTQRSRQCSCGPEDADADYLMFGEATNCDMECTGSD---DGEICGGS-RAMSTYEFRQQAITENAL-------EENEERRCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNE----------FVKSNGETHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAPVFNLGAAALSAAYLL-WSS 636
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 697 bits (1800), Expect = 1.510e-242 Identity = 377/655 (57.56%), Postives = 435/655 (66.41%), Query Frame = 1 Query: 7 NGTLFACNGESSAYFVGNGTWNTTYTSNDGDELDIDVFYATYQNQLWVRHLQPHMDPSLYNALNETTIRLNITCGGELEDTA---GCIEFTANFTEATPYNATDAFEFEDECFHGFSSGAQAQSVQVHAASPVGPARSASLGTGRALILAGKADQGLPWSEGFYANGSQKDDEFWGEWWTTTNSRYNLTAEDDD-ANRIEGIGSLY-FYCPTTDQTGCGVRPCGTWGLRNAGTETCPNEIEEVNFC--------------------------CPAQCGTCGGPGCGSRPGG----QSCCVGPLLDSGVTCDDNGVAPCIMNTLAGETCSDG-VVGATSCRSTKTREHRTTNLTPALLVFFAPPVTENEENGCNGTVSEFWDPRVGVWLSTFQTLDGESHDLDMFYLNMVDGVNELWVTEIESWMAPSLYNQLQHNYVKLTVTCPEDNVAVQSCVIFKPTFTNWSPEVDGAMAGYRFSDPALPSFDIPAAVPNSPGDVILTTNNGVVTKTGAETETFCNGDSAEYFGEDGKWYNQASSTTLALRLFLKSDGAPHELRHVFYLRERDLYAATIQSVWEPNLRSLLANRIVRMKVWCTNDERAQYLFLRVSGEPAACDDIDELCTDVITGG--ALQLIPTFKQCATTVSAAYLVGWLS 1857 NGTL +CNGESSAY VG+ TWNTTY NDGDEL++DVFYATYQNQLWVRHLQPHMDPSLY ALN+TTIRLNITC ++ GC+EFT NFTEATPYN T+ +EF D+C HGFSSG + QSV VHAASP+GP SASLG G ALILAGKADQGLPWSEGF +GS+KDDEFW WW +SRY T E DD +GI YC + + C P E+ + + C C GSR G + C GP C M + DG + G S ST E R +T L E+EE GC G+ ++FWDP+ G W STF+T+DGESHDLDMFY+++VDGVNELWVTEIESWMAPSLYNQLQ+NYVKL +TCPEDNV V SCVIF+PTFTNWSP+VDGA AGYRFSDPALPSFDIP AVPNSPGDV+LTT+N VVTKTGA TET+CNGDSAEY GEDG WYN F+KSDG HEL+HVFY +RDLYAATIQ+ WEPNLR LL NRIVR++V+CTNDERA+YL++RVSGE A CDDI++LCT+V G ALQL P F A +SAAYL+ W S Sbjct: 73 NGTLHSCNGESSAYQVGDDTWNTTYVGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWADVDSRYGSTEESDDPCTEYDGIVDADGVYCCSDEDNTCDSGXXXXXXXXXXXXXPAPCELLDYTYLGCFEDNRNRERFMEMAARRWDMTTELCEELCA-------GSRQFGTQWSRECWCGPEDADADHLMFGEATNCNMECSGSD---DGEICGGHSAMSTY--EFRQQAITENAL-------EESEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNA----------FVKSDGETHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAPVFNLGAAALSAAYLL-WSS 697
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 684 bits (1765), Expect = 8.060e-237 Identity = 363/624 (58.17%), Postives = 422/624 (67.63%), Query Frame = 1 Query: 7 NGTLFACNGESSAYFVGNGTWNTTYTSNDGDELDIDVFYATYQNQLWVRHLQPHMDPSLYNALNETTIRLNITCGGELEDTA---GCIEFTANFTEATPYNATDAFEFEDECFHGFSSGAQAQSVQVHAASPVGPARSASLGTGRALILAGKADQGLPWSEGFYANGSQKDDEFWGEWWTTTNSRYNLTAEDDD-ANRIEGIGSLY-FYCPTTDQTGCGVRPCGTWGLRNAGTETCPNEIEEVNF--CCPAQCGT----------------CGGPGCGSRPGG----QSCCVGPLLDSGVTCDDNGVAPCIMNTLAGETCSDGVVGATSCRSTKTREHRTTNLTPALLVFFAPPVTENEENGCNGTVSEFWDPRVGVWLSTFQTLDGESHDLDMFYLNMVDGVNELWVTEIESWMAPSLYNQLQHNYVKLTVTCPEDNVAVQSCVIFKPTFTNWSPEVDGAMAGYRFSDPALPSFDIPAAVPNSPGDVILTTNNGVVTKTGAETETFCNGDSAEYFGEDGKWYNQASSTTLALRLFLKSDGAPHELRHVFYLRERDLYAATIQSVWEPNLRSLLANRIVRMKVWCTNDERAQYLFLRVSGEPAACDDIDELCTDVITGGALQLI 1797 NGTL +CNGESSAY VG+ TWNTTY NDGDEL++DVFYATYQNQLWVRHLQPHMDPSLY ALN+TTIRLNITC ++ GC+EFT NFTEATPYN T+ +EF D+C HGFSSG + QSV VHAASP+GP SASLG G ALILAGKADQGLPWSEGF +GS+KDDEFW WW +SRY T E DD +GI YC + +++ E+ + + C + CG GSR G + C GP A C M + DG + S R+ T E R +T L ENEE GC G+ ++FWDP+ G W STF+T+DGESHDLDMFY+++VDGVNELWVTEIESWMAPSLYNQLQ+NYVKL +TCPEDNV V SCVIF+PTFTNWSP+VDGA AGYRFSDPALPSFDIP AVPNSPGDV+LTT+N VVTKTGA TET+CNGDSAEY GEDG WYN F+KSDG HEL+HVFY +RDLYAATIQ+ WEPNLR LL NRIVR++V+CTNDERA+YL++RVSGE A CDDI++LCT V L + Sbjct: 73 NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSNWWAVVDSRYGSTEESDDPCTEHDGIVDADGVYCCSDEESTXXXXXXXXXXXXXXXXXXXXXELLDYTYLGCFKDRSSNRIMELEAKRSDMTAELCGELCAGSRQFGTQRSRQCWCGPEDADADYLMFGESAKCEMECTGSD---DGEICGGS-RAMSTYEFRQQAITKNAL-------EENEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNA----------FVKSDGDTHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLRVYCTNDERAEYLYIRVSGESATCDDIEDLCTAVFPRAGLDKV 675
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7FS82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS82_ECTSI) HSP 1 Score: 292 bits (747), Expect = 2.710e-90 Identity = 140/191 (73.30%), Postives = 156/191 (81.68%), Query Frame = 1 Query: 7 NGTLFACNGESSAYFVGNGTWNTTYTSNDGDELDIDVFYATYQNQLWVRHLQPHMDPSLYNALNETTIRLNITCGGELEDTA---GCIEFTANFTEATPYNATDAFEFEDECFHGFSSGAQAQSVQVHAASPVGPARSASLGTGRALILAGKADQGLPWSEGFYANGSQKDDEFWGEWWTTTNSRYNLTAE 570 NGTL +CNGESSAY VG+ TWNTTY NDGDEL++DVFYATYQNQLWVRHLQPHMDPSLY ALN+TTIRLNITC ++ GC+EFT NFTEATPYN T+ +EF D+C HGFSSG Q QSV VHAASP+GP SASLG G ALILAGKADQGLPWSEGF +GS+KDDEFW +WW T +SRY T E Sbjct: 87 NGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWATVDSRYVSTEE 277
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7FS83_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS83_ECTSI) HSP 1 Score: 283 bits (724), Expect = 2.010e-87 Identity = 128/157 (81.53%), Postives = 144/157 (91.72%), Query Frame = 1 Query: 994 ENEENGCNGTVSEFWDPRVGVWLSTFQTLDGESHDLDMFYLNMVDGVNELWVTEIESWMAPSLYNQLQHNYVKLTVTCPEDNVAVQSCVIFKPTFTNWSPEVDGAMAGYRFSDPALPSFDIPAAVPNSPGDVILTTNNGVVTKTGAETETFCNGDSA 1464 ENEE GC G+ ++FWDP+ G W STF+T+DGESHDLDMFY+++VDGVNELWVTEIESWMAPSLYNQLQ+NYVKL +TCPEDNV V SCVIF+PTFTNWSP+VDGA AGYRFSDPALPSFDIP AVPNSPGDV+LTT+N VVTKTGA TET+CNGDSA Sbjct: 89 ENEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSA 245
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI) HSP 1 Score: 162 bits (409), Expect = 2.150e-40 Identity = 97/250 (38.80%), Postives = 140/250 (56.00%), Query Frame = 1 Query: 1129 GVNELWVTEIESWMAPSLYNQLQHNYVKLTVTC-PEDNVAVQ--SCVIFKPTFTNWSPEVDGAMAGYRFSDPALPSFDIPAAVPNSPGDVILTTNNGVVTKTGAETETFCNGDSAEYFGEDGKWYNQASSTTLALRLFLKSDGAPHELRHVFYLRERD-LYAATIQSVWEPNLRSLLANRIVRMKVWCTNDERAQ--YLFLRVSGEP--AACDDIDELCTDVITGGALQLIPTFKQCATTVSAAYLVGWL 1854 G E+ V+ I + +AP++ + L ++L +TC ED + ++ SCV+F+ FTN+SP D MA +RF DPA+P ++P A P SPGD+ L N VV G+E CNGD AEY GEDG+WY F SDG P+ L HVFY + D L+ ATIQS W PNL + L NR VR+ + C+N + YL ++ G+ +CDD LC + G + +C T + AY++ ++ Sbjct: 126 GDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFW----------FTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIGGQEFDESCDDHSGLC---VHDGPDDDTDSGVRCETGIGLAYVLTFV 362
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.280e-7 Identity = 37/91 (40.66%), Postives = 48/91 (52.75%), Query Frame = 1 Query: 670 GLRNAGTETCPNEI---EEVNFCCPAQCGTCGGPGCGSRPG--GQSCCVGPLLDSGVTCDDNGVAPCIMN--TLAGETCSDGVVGATSCRS 921 G+ +A TC N + E+ CCP +CGTCGG GCGSRPG CC + + C APC+++ T A TCS+GV C S Sbjct: 15 GVAHASGTTCSNGLSGLEKGGVCCPVECGTCGGTGCGSRPGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEETEADPTCSNGVAKGDICCS 105
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 4.810e-6 Identity = 41/118 (34.75%), Postives = 51/118 (43.22%), Query Frame = 1 Query: 574 DDANRIEGIGSLYFYCPTTDQTG---CGVRPCGTWGLRNA------------GTETCPNEI---EEVNFCCPAQCGTCGGPGCGSRPG---GQSCCVGPLLDSGVTCDDNGVAPCIMN 864 D I G G CP+T CG PC G A GT TC N I ++ CC A CG CGG GCGS PG +CC + +G C GV+PC+++ Sbjct: 399 DGCGTIPGTGGSDNCCPSTILAAGVVCGEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVID 516
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: A0A2R5GK99_9STRA (Fucolectin-3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK99_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.370e-5 Identity = 30/56 (53.57%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 697 CPNEIEEVNFCCPAQCGTCGGPGCGSRPGGQS-CCVGPLLDSGVTCDDNGVAPCIM 861 CPN I + CCP CGTCGGPGC SRPGG S CC + +S C+ G PC M Sbjct: 414 CPNGIPQGRECCPKSCGTCGGPGCSSRPGGSSKCCQSHIANSDRFCELVG-PPCRM 468
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Match: A0A7R9YY20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY20_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.680e-5 Identity = 34/91 (37.36%), Postives = 39/91 (42.86%), Query Frame = 1 Query: 598 IGSLYFYCPTTDQTGCGVRPCGTWGLRNAGTETCPNEIEEVNFCCPAQCGTCGGPGCGSRPGG-QSCCVGPLLDSGVTCDDNGVAPCIMNT 867 I S C GC + P W C + + CC CGTCGG GCGSRPGG SCC + SG C D CI+ T Sbjct: 296 IASSDIVCSEFTDVGC-IMPATQW---------CEYGVISGDICCAGSCGTCGGTGCGSRPGGWSSCCGSGVTSSGNVCSDYSDIACIIPT 376 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig792.16879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig792.16879.1 >prot_L-elsbetiae_contig792.16879.1 ID=prot_L-elsbetiae_contig792.16879.1|Name=mRNA_L-elsbetiae_contig792.16879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=567bp MDPSLYNALNETTIRLNITCGGELEDTAGCIEFTANFTEATPYNATDAFEback to top mRNA from alignment at L-elsbetiae_contig792:27183..31846- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig792.16879.1 ID=mRNA_L-elsbetiae_contig792.16879.1|Name=mRNA_L-elsbetiae_contig792.16879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4664bp|location=Sequence derived from alignment at L-elsbetiae_contig792:27183..31846- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig792:27183..31846- >mRNA_L-elsbetiae_contig792.16879.1 ID=mRNA_L-elsbetiae_contig792.16879.1|Name=mRNA_L-elsbetiae_contig792.16879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3402bp|location=Sequence derived from alignment at L-elsbetiae_contig792:27183..31846- (Laminarionema elsbetiae ELsaHSoW15)back to top |