mRNA_L-elsbetiae_contig7916.16873.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7916.16873.1 vs. uniprot
Match: D7G8Q9_ECTSI (Ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q9_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.090e-57 Identity = 292/371 (78.71%), Postives = 313/371 (84.37%), Query Frame = 1 Query: 1 MASYIVTGIHAAARAGKYGKVQDYITKGGDVNKPDRENCSPLMWACWGGHVEIVKRLLDEGAKPDTFSHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDIKELLKNKMPEDDERGLDGSYHPESSGTLMGAAMSVAKNVASNPAISIAGGGAGAVPDETTPAGSAAETFSASEDAVTANGAAKVTSGDLPETN-------GGRSNGGAEGAPLEVVAPPELAKTTSKSEAPAPSGRKSSFLLNMGG 1092 MASYIVTG+HAAARAGK KVQD+I KGGDVNKPDRE+CSPLMWACWGGHVEIVKRLLDEGAKPDT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDI +LLKNKMPEDD++GLDGSYHPES GTLMGAAMSVAKNVAS+ + S G A A TTP +AA + AV+ +GA+K T+G+ P + G SNG +GAP PE KT +KS+APAP+ RKSS L +GG Sbjct: 1 MASYIVTGVHAAARAGKLQKVQDFIAKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGAKPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDIIKLLKNKMPEDDDQGLDGSYHPESDGTLMGAAMSVAKNVASHTSTSSTTGEAAA---NTTP--TAAADAVVDKAAVSTSGASKATNGESPRADRQETIPPSGDSNGLVDGAP------PEQTKTAAKSDAPAPA-RKSSLLFGVGG 359
BLAST of mRNA_L-elsbetiae_contig7916.16873.1 vs. uniprot
Match: A0A812UNP7_SYMPI (ANK2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UNP7_SYMPI) HSP 1 Score: 58.5 bits (140), Expect = 1.970e-5 Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 1 Query: 34 AARAGKYGKVQDYITKGGDVNKPDRENCSPLMWACWGGHVEIVKRLLDEGAKP 192 AAR GK G VQ + G + + D + +PL+ ACW GHV +V+ LLD GAKP Sbjct: 2734 AARLGKTGVVQALLEDGAEKDVEDHDGVTPLLKACWSGHVHVVRLLLDAGAKP 2786 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7916.16873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7916.16873.1 >prot_L-elsbetiae_contig7916.16873.1 ID=prot_L-elsbetiae_contig7916.16873.1|Name=mRNA_L-elsbetiae_contig7916.16873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=412bp MASYIVTGIHAAARAGKYGKVQDYITKGGDVNKPDRENCSPLMWACWGGHback to top mRNA from alignment at L-elsbetiae_contig7916:1480..8789+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7916.16873.1 ID=mRNA_L-elsbetiae_contig7916.16873.1|Name=mRNA_L-elsbetiae_contig7916.16873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7310bp|location=Sequence derived from alignment at L-elsbetiae_contig7916:1480..8789+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7916:1480..8789+ >mRNA_L-elsbetiae_contig7916.16873.1 ID=mRNA_L-elsbetiae_contig7916.16873.1|Name=mRNA_L-elsbetiae_contig7916.16873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2472bp|location=Sequence derived from alignment at L-elsbetiae_contig7916:1480..8789+ (Laminarionema elsbetiae ELsaHSoW15)back to top |