mRNA_L-elsbetiae_contig7911.16867.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.340e-18 Identity = 83/216 (38.43%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 338 ATPKQWAEWPRAPLGHAAGTGNADLVDRQAAERRRGGRRECAGVRGVQ*PEPPTCGRGRRERASGFGFDESGHRRRHGDGRKEARPKRQTPLRRAAPGSDKVAAAKALVIDPPGAD-------NDGTLHLAIKGGHAGVAGDLLLRGADPELKGSNGHLPIHVAASRGQDAALRNLLHKRTHVNCRRFRSLRPPLLLAVGEGRVSTAKLLMAAGAD 964 ATP+QWAEW RAPL HAAGTGN DLVD+ G G R +G GD + + TPL A G ++ AAA+AL++ GAD NDG LHL I GGHAG SNG+ PIH+ A G D L+ KR +NC R PL +AV E VST K+L+A GAD Sbjct: 12 ATPEQWAEWLRAPLEHAAGTGNRDLVDK-------------------------LLGAGLRRAGAG------------GDMKAKTLDTGHTPLDLAVVGGNE-AAAEALIM--AGADMNVLDVKNDGLLHLTITGGHAG----------------SNGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIER-RTPLYVAVRENHVSTVKVLLAEGAD 170
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.270e-16 Identity = 87/228 (38.16%), Postives = 111/228 (48.68%), Query Frame = 2 Query: 314 IFNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDRQAAERRRGGRRECAGVRGVQ*PEPPTCGRGRRERASGFGFDESGHRRRHGDGRKEARPKRQ-TPLRRAAPGSDKVAAAKALVIDPPGAD-------NDGTLHLAIK--GGHAGVAGDLLLRGADPELKGSNGHLPIHVAASRGQDAALRNLLHKRTHVNCRRFRSLRPPLLLAVGEGRVSTAKLLMAAGADA 967 IF +CDRAT +QW EW RAPL HAAGT N DLV++ + G AG RG +G G+ + P TPL A + AAA+ LV+ GAD D LHLAI G A +A DLLL GA+P+ +G PIHVAAS G+ + L H R ++ + + P+ LAV VST K+L+AAGADA Sbjct: 22 IFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLL----KAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGA----GEDMEAKTPGTGGTPLHVAVMRGQE-AAARVLVL--AGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAASHGRHDVVHALAHTRADLDALDGKGM-TPISLAVEGDHVSTVKVLLAAGADA 237
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.690e-11 Identity = 77/262 (29.39%), Postives = 99/262 (37.79%), Query Frame = 2 Query: 728 GVAGDLLLRGADPELKGSNGHLPIHVAASRGQDAALRNLLHKRTHVNCRRFRSLRPPLLLAVGEGRVSTAKLLMAAGADATTTLSGSHPTQHSHGERQRGHHRSDDRRGRRRGQCREP*QCSPARLRG-------SPR-------LVFGHDCSLGTGSERARQKSPRQETY---SPLHIACQRGNADAADLLLRWGADEDYL*QGREDTKRLGTECCRSCPAGSSENPTVCPSCWRLLRRTGPWRRHGMLVLCRAHPDRLRL 1462 G+A DLLL GA+P G G PIH AA G D + +L HK C R LLLAV V+ L+A GAD L+ P +H PA + SP+ F C + + T SPL AC+ G+ DAADLLLRWGADE + + + T S + + WRR G LV C +HPDR++L Sbjct: 6 GIAKDLLLSGANPSKAGFEGWFPIHFAAHHGLDEVVVSLFHKGIDPTCVTTRE-ETHLLLAVKRNHVAIINALLAEGAD-VNFLTTRRPVPLAHI-----------------AALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQL 248
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 8.580e-10 Identity = 78/225 (34.67%), Postives = 92/225 (40.89%), Query Frame = 2 Query: 314 IFNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDRQAAERRRGGRRECAGVRGVQ*PEPPTCGRGRRERASGFGFDESGHRRRHGDGRK---EARPKRQTPLRRAAPGSDKVAAAKALV-----IDPPGADNDGTLHLAIKGGHAGVAGDLLLRGADPELKGSNGHLPIHVAASRGQDAALRNLLHKRTHVNCRRFRSLRPPLLLAVGEGRVSTAKLLMAAGAD 964 IF VCDRATP+QWAEW RAPL HAAGTGN DLVD+ G AG RG A G RR G GR ++ TPL A G K AAAKAL+ ++ A NDG LH A G D + L K +NC + PL LAV V+T K+L++ GAD Sbjct: 18 IFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGA----GANVGAGWRGCHGKTLLHAA------AEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGG-KEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKG-ETPLRLAVRGDHVTTVKVLLSEGAD 230
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 7.820e-7 Identity = 36/85 (42.35%), Postives = 44/85 (51.76%), Query Frame = 2 Query: 1211 IACQRGNADAADLLLRWGADEDYL*-QGREDTKRLGTECCRSCPAGSSENPTVCPSCWRLLRRTGPWRRHGMLVLCRAHPDRLRL 1462 + + G+A DLLLRWGADE + QG +GT R C E+ S WRR G+LVLCRAHPDRL+L Sbjct: 283 VGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGT---RRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL 364
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 1.030e-6 Identity = 74/232 (31.90%), Postives = 103/232 (44.40%), Query Frame = 2 Query: 314 IFNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDR--QAAERRRGGRRECAGVRGVQ*PEPPTCGRGRRERAS----GFGFDESGHRRRHGDGRKEARPKRQTPLRRAAPGSDKVAAAKALVIDPP-----GADNDGTLHLAIKGGHAGVAGDLLLRGADPEL--KGSNGH-LPIHVAASRGQDAALRNLLHK-RTHVNCRRFRSLRPPLLLAVGEGRVSTAKLLMAAGAD 964 IF V + ATP+QWA W RAPL HAA +GN +LVDR +A + G R C RG + G ++ G G D + A ++ L ++ G + AA K ++ AD G L A+K G + G+LL+ GA+P + + S GH P+H AA +G LL T N G V+T K+L+AAGAD Sbjct: 15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGC---RGRSLLDAAALGGNAGVMSALLQAGCGPDVN----------VVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKN-----------------GHVATVKVLLAAGAD 216
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 2.210e-6 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 314 IFNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDR--QAAERRRGGRREC 460 IF +CDRAT +QWAEW RAPL HAAGT N DLV++ +A GRR C Sbjct: 24 IFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGC 74
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 5.990e-6 Identity = 55/158 (34.81%), Postives = 66/158 (41.77%), Query Frame = 2 Query: 314 IFNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDRQAAERRRGGRRECAGVRGVQ*PEPPTCGRGRRERASGFGFDESGHRRRHGDGRKEARPKRQTPLRRAAPGSDKVAAAKALVIDPPGADNDGTLHLAIKGGHAGVAGDLLLRGADPELKGSNG 787 IF +CDRAT +QWAEW RAPL HAAGT N DLV++ + G AG RG C A+ G +E T L RA G D A +V P LH+A+ G A L+L GAD NG Sbjct: 22 IFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLL----KAGADGSAGWRG--------CDDKTLLHAAAEGGNEEV----------------VTALVRAGAGEDMEAKVLGIVGGTP-------LHVAVATGKDAAARVLMLAGADVNAADRNG 144
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: A0A6H5KNA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA2_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 9.380e-6 Identity = 38/94 (40.43%), Postives = 45/94 (47.87%), Query Frame = 2 Query: 1205 LHIACQRGNADAADLLLRWGADEDYL*QGREDTKRLGTECCRSCPAGSSENPTV--CPSCWRLLR------RTGPWRRHGMLVLCRAHPDRLRL 1462 LH AC N DAADLLL WGADE T + S + P P+ RL + + WRR G+LV+CRAHPDRL L Sbjct: 23 LHTACHVVNPDAADLLLTWGADE---------TAADWNDAAVSAVIPRIDEPPEENRPAILRLAKLLEFADKDRTWRRRGLLVMCRAHPDRLLL 107
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 1.320e-5 Identity = 32/53 (60.38%), Postives = 33/53 (62.26%), Query Frame = 2 Query: 317 FNTVCDRATPKQWAEWPRAPLGHAAGTGNADLVDRQAAERRRGGRRECAGVRG 475 F V DRATP QWAEW RAPL HAA TGN DLVD+ GG AG RG Sbjct: 61 FKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGG----AGWRG 109 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7911.16867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7911.16867.1 >prot_L-elsbetiae_contig7911.16867.1 ID=prot_L-elsbetiae_contig7911.16867.1|Name=mRNA_L-elsbetiae_contig7911.16867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp MRPLPCLVHTPLSIATENDNADIIAAMIAEAGGEVNAGNLNSAAPLAFAAback to top mRNA from alignment at L-elsbetiae_contig7911:2757..4731- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7911.16867.1 ID=mRNA_L-elsbetiae_contig7911.16867.1|Name=mRNA_L-elsbetiae_contig7911.16867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1975bp|location=Sequence derived from alignment at L-elsbetiae_contig7911:2757..4731- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7911:2757..4731- >mRNA_L-elsbetiae_contig7911.16867.1 ID=mRNA_L-elsbetiae_contig7911.16867.1|Name=mRNA_L-elsbetiae_contig7911.16867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=588bp|location=Sequence derived from alignment at L-elsbetiae_contig7911:2757..4731- (Laminarionema elsbetiae ELsaHSoW15)back to top |