mRNA_L-elsbetiae_contig7908.16863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 124 bits (311), Expect = 5.080e-29 Identity = 75/172 (43.60%), Postives = 99/172 (57.56%), Query Frame = 1 Query: 112 QRVMLNRTCDFCYKRKRPCDGLAQRRCSFCIAKNQAECHYRRRLSRSRTSASTSRHPRHDDDEXXXXXXXDATTGRSFWRTDSDAVA---ANFSAR---GGVSAAVTSGADGGREPGRLLPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLA 609 Q ++L ++CDFC+KR++ CDG AQRRCSFCI K + ECHY R S++ T ++D + R+ D+DA A A +A+ G + VT G +LP KR R SASPATGL GL EN LGDFF CLGFL+LA +S +R A+V +M A Sbjct: 96 QTIVLKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKSKTPTVVPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADTGAQHTAKKKGSGTAVGVT---------GLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRA 258
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 4.080e-19 Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 130 RTCDFCYKRKRPCDGLAQRRCSFCIAKNQAECHYRRRLSRSRTSASTSRHPRHDDDEXXXXXXXDATTGRSFWRTDSDAVAANFSARGGVSAAVTSGADGGREPGRLLP-------LKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIML 606 ++C FC KRKR CD + RCS CI KNQ CHY + R +A + R XXX ++ S + ++A G V A V + R +P LKRCR SASPATGLVG+QEN FLG FF CLG L L +STVR+A+V +M+ Sbjct: 56 KSCTFCAKRKRSCDS-RRPRCSLCIEKNQPHCHYPLKPLPKRAAAKPTAARRLXXXXXXXSDCSISSGDASKAKRLAEAHEVASYGAGSVLATVDT---------RSMPTVRGRMSLKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMM 211
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 6.370e-18 Identity = 67/177 (37.85%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 97 APPRAQRVMLNRTCDFCYKRKRPCDGLAQRRCSFCIAKNQAECHYRRRLSRSRTSASTSRHPRHDDDEXXXXXXXDATTGRSFWRTDSDAVAANFSARGGVSAAVTSGADGGREPGRLLP-------LKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIML 606 APPR ++C FC KRKR CD + RCS CI K Q CHY + R +A + R ++ S + ++A GGV A V + R +P LKRCR S+SPATGLVG+ EN FL DFF C G L L +STVR+A+V +M+ Sbjct: 49 APPR----QTYKSCTFCAKRKRACDS-QRPRCSLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNT---------RSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVMM 211
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 7.380e-17 Identity = 65/166 (39.16%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 130 RTCDFCYKRKRPCDGLAQRRCSFCIAKNQAECHYRRRLSRSRTSASTSRHPRHDDDEXXXXXXXDATTGRSFWRTDSDAVAANFSARGGVSAAVTSGADGGREPGRLLP-------LKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIML 606 ++C FC KRKR CD R CI KNQ CHY + R +A + XXX ++ S + ++A GGV A V + R +P LKRCR S+SPATGLVG+ EN FL DFF CLG L L +STVR+A+V +M+ Sbjct: 56 KSCTFCAKRKRACDSQKPRCRVLCIEKNQPHCHYPLKPLLKRAAAKPTAAXXXXXXXXXXSDCSISSGDASKAKRLAEAPEVASYGTGGVLATVDT---------RSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVMM 212
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D7FTD5_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD5_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 5.330e-15 Identity = 65/179 (36.31%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 130 RTCDFCYKRKRPCDGLAQRRCSFCIAKNQAECHYRRRLSRSRTSASTSRHPRHDDDEXXXXXXXDATTGRSFWRTDSDAVAAN---FSARGGVSAAVTSGADGGREPGRLLP----LKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGSP---HNPQH 636 ++C C +RKR CD + RCS+CI K + C YR +S T P +T S+ ++ AN ++ GGV T+ AD P +P +KRCR ASPATGLVG++E+ FL DFF C G L L +STVR+A+V IM+ P +N +H Sbjct: 41 KSCMLCARRKRACDS-RKPRCSYCIEKKRPYCFYR---LKSATKPGAEGPP-----------SLSSTFSASWGGVNTAMRPANPPRVASHGGVEVLATA-ADIWSMP--TVPEYPSIKRCRLRASPATGLVGMKESGFLCDFFGCFGILPLTTESTVRNAMVEIMMGAELPRKRYNEEH 201
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 2.700e-14 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 451 LPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGSPH 624 LPLKRCR SASPATGLVG+QEN FL DFF C+GFL L +S VR A+VR+M + H Sbjct: 91 LPLKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRSHVRGAMVRMMAHSAAQH 148
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 5.710e-14 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 439 PGRLLPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGSPHNP 630 PG +LPLKR + SASPATGLVG+QEN FL DFF C+GF+ ++S +R A+VR+M + H P Sbjct: 90 PGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQP 153
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 7.480e-14 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 448 LLPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGSPHNP 630 +LPLKR R +ASPATGLVG+QEN+FL DFF C+GFL L S +R +VR+M +PH P Sbjct: 20 MLPLKRFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRP 80
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 1.010e-13 Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 448 LLPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGSPHNP 630 +LPLKR R SASPATGLVG+QEN FL DFF C+GFL L S +R +VR+M +PH P Sbjct: 20 MLPLKRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRP 80
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.950e-13 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 448 LLPLKRCRFSASPATGLVGLQENIFLGDFFACLGFLTLANQSTVRDAVVRIMLAGGS 618 +LP KRCR SASPATGLVG+QEN FL DFF C+GFL L S +R+ +V IML S Sbjct: 5 MLPFKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRAS 61 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7908.16863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7908.16863.1 >prot_L-elsbetiae_contig7908.16863.1 ID=prot_L-elsbetiae_contig7908.16863.1|Name=mRNA_L-elsbetiae_contig7908.16863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp PLLPLSHTRLQRNNSENQRPEKNKLLVLEPIRAPPRAQRVMLNRTCDFCYback to top mRNA from alignment at L-elsbetiae_contig7908:3821..6590+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7908.16863.1 ID=mRNA_L-elsbetiae_contig7908.16863.1|Name=mRNA_L-elsbetiae_contig7908.16863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2770bp|location=Sequence derived from alignment at L-elsbetiae_contig7908:3821..6590+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7908:3821..6590+ >mRNA_L-elsbetiae_contig7908.16863.1 ID=mRNA_L-elsbetiae_contig7908.16863.1|Name=mRNA_L-elsbetiae_contig7908.16863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig7908:3821..6590+ (Laminarionema elsbetiae ELsaHSoW15)back to top |