mRNA_L-elsbetiae_contig7907.16862.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A6H5KVN5_9PHAE (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVN5_9PHAE) HSP 1 Score: 226 bits (575), Expect = 3.700e-72 Identity = 151/195 (77.44%), Postives = 164/195 (84.10%), Query Frame = 1 Query: 28 RVIAAASLVRAASGRSLSWLGKSDLAFAVQTQ----------RASISFGSS-GITPSSRIATVLRHMSASPGXXXXXXXXXXXXXXXXXXGE-TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 R IA AS +R AS RS + +G SDLAF V + RAS + SS ITP SRIATV+R+MS++PGXXXXXXXXXXXXXXXXXX E TIFDKIISK IP+ IIHEDELCLAF+DISPQAPVHFLVIPKSRDGLTQLSKAV+SNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLH+HVI Sbjct: 3 RAIATASFIRVASLRSFAVVG-SDLAFGVVKRAPPPSSAWIGRASCTSSSSCRITPRSRIATVIRNMSSNPGXXXXXXXXXXXXXXXXXXXEATIFDKIISKEIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVI 196
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A5B8MF15_9CHLO (Histidine triad family protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MF15_9CHLO) HSP 1 Score: 163 bits (412), Expect = 2.110e-48 Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 1 Query: 265 GETIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 G TIFDK+ISK IP+ +I+ED+ CLAFRDI+PQAPVHFLVIPK+RDGLT+LSKA + +K +LGHL++ AQKVAK++GL EGFRV +NDG GCQ+VYHLHLHVI Sbjct: 22 GPTIFDKVISKEIPADVIYEDDKCLAFRDINPQAPVHFLVIPKARDGLTRLSKAHEGHKDILGHLLYTAQKVAKDEGLGEGFRVAINDGPGGCQSVYHLHLHVI 125
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A7S1SQN7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQN7_9CHLO) HSP 1 Score: 162 bits (411), Expect = 2.250e-48 Identity = 72/102 (70.59%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 265 GETIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLH 570 G TIFDKI++K IP+ +I+ED+LCLAFRD++PQAP HFLVIPK+R GLTQLSKAV+++K LLGHL++VAQ VAK++GL EGFR+V+NDG GCQ+VYHLH+H Sbjct: 13 GPTIFDKIVAKEIPADVIYEDDLCLAFRDVNPQAPTHFLVIPKARSGLTQLSKAVEAHKGLLGHLIYVAQDVAKKEGLGEGFRLVINDGPNGCQSVYHLHIH 114
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: C1EDE2_MICCC (HIT domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=C1EDE2_MICCC) HSP 1 Score: 160 bits (405), Expect = 1.520e-47 Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 271 TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 TIFDKII+K IPS +I+ED LCLAFRDI+PQA HFLVIPK R GLTQLSKA + +K LLGHL++ AQKVAK++ LD+GFRVV+NDGV+GCQ+VYHLH+HV+ Sbjct: 8 TIFDKIIAKEIPSDVIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKLDKGFRVVINDGVEGCQSVYHLHIHVV 109
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A836C9C8_9STRA (14 kDa zinc-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C8_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.710e-47 Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 1 Query: 271 TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 T+FDKI K IPS II+ED+ CLAF DISPQAPVHFLVIPK R+G++QLS A + NK LLGHLM+VAQ VAK+QGL+ GFRVVVNDG +GCQ+VYHLHLHV+ Sbjct: 24 TLFDKIAQKQIPSDIIYEDDKCLAFNDISPQAPVHFLVIPKDREGMSQLSTATEDNKPLLGHLMYVAQLVAKQQGLERGFRVVVNDGKEGCQSVYHLHLHVV 125
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: C1MY73_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MY73_MICPC) HSP 1 Score: 160 bits (404), Expect = 2.220e-47 Identity = 73/102 (71.57%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 271 TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 TIFDKI++K IP+++I+ED LCLAFRD++PQA HFLVIPK R GLT+LS A + +KALLGHL+F AQ+VAK++GL EGFRVV+NDGVQGCQ+VYHLHLHV+ Sbjct: 8 TIFDKIVAKEIPATVIYEDNLCLAFRDVAPQAKTHFLVIPKIRAGLTRLSNAEEEHKALLGHLLFTAQRVAKDEGLGEGFRVVINDGVQGCQSVYHLHLHVL 109
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A8J6C1F3_DIALT (HIT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1F3_DIALT) HSP 1 Score: 159 bits (403), Expect = 2.870e-47 Identity = 75/102 (73.53%), Postives = 88/102 (86.27%), Query Frame = 1 Query: 271 TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 TIFDKI+SK IPS +++EDELCLAFRDI+PQAPVH LVIPK +DGL+QLSKA +K LLGHL+FVAQ VAK +GL EGFR+V+NDG GCQ VYHLHLHV+ Sbjct: 7 TIFDKILSKEIPSDVVYEDELCLAFRDIAPQAPVHVLVIPKRKDGLSQLSKADARHKELLGHLLFVAQHVAKSEGLAEGFRIVINDGKHGCQAVYHLHLHVL 108
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: I0Z0W6_COCSC (HIT-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0W6_COCSC) HSP 1 Score: 159 bits (403), Expect = 2.030e-46 Identity = 75/102 (73.53%), Postives = 91/102 (89.22%), Query Frame = 1 Query: 271 TIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 TIFDKIISK IP++II+EDE LAFRDI+PQAPVHFLVIPK RDGLTQLSK DS++ +LGHL+ VA KVA ++GL++GFRVV+NDGV GCQ+VYHLHLH++ Sbjct: 70 TIFDKIISKQIPANIIYEDESALAFRDINPQAPVHFLVIPKHRDGLTQLSKCNDSHEKVLGHLLVVASKVALQEGLNDGFRVVINDGVNGCQSVYHLHLHIV 171
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: A0A061SGY2_9CHLO (Histidine triad (HIT) family protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SGY2_9CHLO) HSP 1 Score: 159 bits (402), Expect = 3.150e-46 Identity = 75/104 (72.12%), Postives = 91/104 (87.50%), Query Frame = 1 Query: 265 GETIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 G TIFDKIISK IP+ +I+ED+ CLAFRDI+PQAP HFLVIPK R+GL++LS A D++K LLGHLMFVAQ+VAK++ L EGFRVV+NDG GCQ+VYHLHLHV+ Sbjct: 71 GPTIFDKIISKEIPADVIYEDDQCLAFRDINPQAPTHFLVIPKVRNGLSRLSNASDAHKPLLGHLMFVAQEVAKQEKLAEGFRVVINDGPNGCQSVYHLHLHVL 174
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Match: M4BM87_HYAAE (HIT domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM87_HYAAE) HSP 1 Score: 158 bits (399), Expect = 5.010e-46 Identity = 72/103 (69.90%), Postives = 92/103 (89.32%), Query Frame = 1 Query: 268 ETIFDKIISKAIPSSIIHEDELCLAFRDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHLHVI 576 ETIFDKII K IP+SI +EDE CLAF D++PQAPVH LVIPK RDGLTQL++A +S+KA+LGHL+FVA+ VA++Q LD+GFR+V+NDGV GCQ+V+HLHLH++ Sbjct: 53 ETIFDKIIKKQIPASIAYEDEQCLAFHDVNPQAPVHILVIPKDRDGLTQLARAEESHKAVLGHLLFVAKLVAEQQKLDKGFRIVINDGVDGCQSVFHLHLHLL 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7907.16862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7907.16862.1 >prot_L-elsbetiae_contig7907.16862.1 ID=prot_L-elsbetiae_contig7907.16862.1|Name=mRNA_L-elsbetiae_contig7907.16862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp MLLCPAFRGRVIAAASLVRAASGRSLSWLGKSDLAFAVQTQRASISFGSSback to top mRNA from alignment at L-elsbetiae_contig7907:6712..9165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7907.16862.1 ID=mRNA_L-elsbetiae_contig7907.16862.1|Name=mRNA_L-elsbetiae_contig7907.16862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2454bp|location=Sequence derived from alignment at L-elsbetiae_contig7907:6712..9165+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7907:6712..9165+ >mRNA_L-elsbetiae_contig7907.16862.1 ID=mRNA_L-elsbetiae_contig7907.16862.1|Name=mRNA_L-elsbetiae_contig7907.16862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig7907:6712..9165+ (Laminarionema elsbetiae ELsaHSoW15)back to top |