mRNA_L-elsbetiae_contig7900.16857.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7900.16857.1
Unique NamemRNA_L-elsbetiae_contig7900.16857.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 559 bits (1440), Expect = 5.380e-181
Identity = 432/743 (58.14%), Postives = 456/743 (61.37%), Query Frame = 1
Query:  388 EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGT-DDRVAGAGGGGKAGXRSSHGXXXXXGNF-------------RQRAETPGNTVHVQFEGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSR----SSGAGWRKQGGMGXXXXXXXRSRRHSAGDSNRAMNHGGXXXQGFGGRPARSSMDGPLTPQGRGXXXXXXXXGGMNRHNNMSM--QMQQNRHLTGGGQ-----QVSLPPHMQQQXXXXXXXXXXXXXXXXXXHGGPLXXXXXXXXXXXXMYAAGFQAA-------GPAF---AAGQYHVPAAVAPTGPEXXXXXXXXXXXXXXXXXXXXX----------------------------ADMMVQTPYGMAPY--PYAMSFQGVPYAPAQQGYPMGYQQIYQGYPYANPQMPQAQQQQQQVPAGGAPAGXXXXXXXXXGPGXXXXXXXXQNAPPTVPLSGAKPSPXXXXXXXHMPMQQHAIIMAGQGQQNPS---TGGGGGLNVGVPSYMPPQMYQLPQQQ 2412
            EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFE HGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGL+GG    AITTEML REFARFGPLDKELT IKPGAKFGFVKYRYRLHAE AKKEL++RP F GLCPS++IEWNS+ESSAQ SETAGSEK T +DR           X     XXXXX                  R E   +TVHVQFEG+Q  VSAVNEVMIRKCFTKWEPVV+IVIPASRFNGVSPGPRQLPRCW FVHFPPTP+GER+AA+AIK LNGTTISELRVHCTMSR    S+G+ W KQG   XXXXXXX          +RAM+H  XXX                     G         GMNRHN   M  Q QQ  HL  GG        + PPHMQ   XXXXXXXXX         GGPL            ++A G+  A       GP     AAGQY  PAA       XXXXXXXXXXXXXXXXXXXXX                             DMMVQT YGMA    PY MSFQGVPYAPAQQGYP            A   +  AQ+                                                 XXXXXXX M MQQHA+IMAGQG QNP        GGLNVGVP YMP QMYQLPQQQ
Sbjct:   51 EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGG----AITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTSAGSPWSKQGXXXXXXXXXXXXXXXXX-XXDRAMSHAXXXXXXX---XXXXXXXXXXXXXXXGRSGGWGGHAGMNRHNMQRMHHQQQQGSHLAHGGAGGHHLPGAFPPHMQHPHXXXXXXXXXAG-------GGPLQHQQAPQLHLPPLFATGYTVATASATGVGPPLSIGAAGQY--PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDMMVQTHYGMAAAYPPYTMSFQGVPYAPAQQGYP------------ARATVASAQR-----------------------------------------XXXXXXXXXXXXXXXXMGMQQHAMIMAGQGPQNPMGXXXXXXGGLNVGVPPYMP-QMYQLPQQQ 722          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 1.520e-175
Identity = 308/408 (75.49%), Postives = 325/408 (79.66%), Query Frame = 1
Query:  388 EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNF--------------RQRAETPGNTVHVQFEGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSRS----SGAGWRKQGGMGXXXXXXXRSRRHSAGDS--NRAMNHGGXXXQGFGGRPARSSMDGPLTPQGR 1551
            EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFE HGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGL+GG    AITTEML REFARFGPLDKELT IKPGAKFGFVKYRYRLHAE AKKEL++RP F GLCPS++IEWNS+ESSAQ SETAGSEK T              X     XXXXX                   R E   +TVHVQFEG+Q  VSAVNEVMIRKCFTKWEPVV+IVIPASRFNGVSPGPRQLPRCW FVHFPPTP+GER+AADAIK LNGTTISELRVHCTMSR     +G+ WRKQG     XXXX R+RRHS      +RAM H  XXXQGFGGRP+RSS+D P   QGR
Sbjct:  188 EEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGG----AITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSRGGSTRAGSPWRKQGXX---XXXXNRARRHSTXXXXXDRAMGHA-XXXQGFGGRPSRSSLDHPGAQQGR 587          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA)

HSP 1 Score: 159 bits (402), Expect = 5.730e-38
Identity = 97/307 (31.60%), Postives = 158/307 (51.47%), Query Frame = 1
Query:  445 LFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNFRQRAETPGNTVHVQFEGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSR 1365
            LFVGDL+R++  E L+  F   G V+++ IKRDR T  +LGYGFV+    ++A  AK+ + G  +G R +R+GWAQKNT+L++G LD      ++T+E+L  EF +FGPL +E T +K G  +GFV++R R  AETAK+E+  +   G +   I+I W                                                  A++  N VH +F+  QS+ +A++E  +R  F K+  V  + +P +  +         P+ +GFV+F  +  G+ +A +AI  +NG  I+ + + C + +
Sbjct:   28 LFVGDLSRDIDVETLKDHFLQFGEVINIDIKRDRMTSNSLGYGFVEFQRFEDALEAKKQLSGARIGERAIRLGWAQKNTNLFIGDLD-----ASVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKNFHGRV---IRIGWGD------------------------------------------------AKSIDNCVHFRFDTSQSK-AAISEATVRDVFGKFGNVESVSLPRNSDD--------TPKGFGFVYFSNSSAGQAAANNAIAEVNGKVIAGVELTCKLGK 269          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 157 bits (398), Expect = 1.760e-37
Identity = 104/311 (33.44%), Postives = 156/311 (50.16%), Query Frame = 1
Query:  445 LFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNFRQRAETPGNTVHVQF----EGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSR 1365
            +FVGDL+R + ++ L    E HG V++V IKRDR T  NLGYGFV+  +H++A  AK+A+ GVE+ GR++R GWAQ+NT+L+VG LD       I   + +  F+R+G L  + T  K    FG VK++ R +AETAK EL+ +   G     +++ W   ++S Q                             H                   VHV+F    E +  Q S ++E +++K F ++  V+ + +P    N +        + +GFVHF  T +GE SA  AI +L+GT I  L V C   R
Sbjct:   77 IFVGDLSRTVKDKDLRAVMELHGSVVNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDN-----TIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKR-IGQSKRPVRVIWG--DTSVQ----------------------------KH------------------CVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTL--------KGYGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNYGR 325          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.620e-37
Identity = 114/356 (32.02%), Postives = 176/356 (49.44%), Query Frame = 1
Query:  385 EEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPG--AKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNFRQRAETPGN------------TVHVQFEGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRC---WGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSRSSGAGWRKQGGM 1401
            +EE  T   + +    ++C LF+GDLAR LTE ++ +AF   G V  V IKRD+ T +NLGYGFV++SSH++A  AKE MQG ++ GRR+R+GWAQ+NT+L++G LD      +   E L R F  FG L    + ++ G   K+G VK+  R  AETA++E+H R    G  P I++ W+  ++  +                      K G   S        + R+    P              +VHV FE +  + + V E +I   F  +  ++ +++P       S     +  C   +GFVHF  +  G   A +AI++L G  ++ +R+ C  SR  G   R   G+
Sbjct:   87 QEEEGTWRKEPENEPKDDCILFIGDLARGLTEREVAQAFAAVGNVEMVDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLD-----ESTNVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTITK----------------------KTGL--SVPLPSNEQHSRELVHIPPPPPAGVLVSSRPYSVHVHFEADGME-NLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSRKPGGPVRASYGL 411          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 152 bits (383), Expect = 6.010e-37
Identity = 106/320 (33.12%), Postives = 152/320 (47.50%), Query Frame = 1
Query:  430 PEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAK-----KELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNFRQRAETPGNTVHVQFEGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPA---SRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSR 1365
            P+E +LF+GDL+R++ E+ L K FE  G V  V IKRD+ T  NLGYGFVK  +   A  AK  + G+E+ GR +R+GWAQKNT+L+V  +  G     IT E L+  F+ FGP+ +E T +K   K+GFVK+++RLHAE AK     K L  + G+  + P ++I W                                                  A T  N VHVQFE   +    + E   ++ F ++  V ++ +P     R  G           +GF+HF    EGE SAA AI  L  + I  + + C   +
Sbjct:    2 PDESSLFIGDLSRSVNEDMLRKLFEQLGEV-EVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLV--GDVERHITGEHLREIFSEFGPIYEEDTFVKRN-KYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKP-VRIGWGD------------------------------------------------ANTQRNCVHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKG-----------YGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 2.300e-35
Identity = 109/329 (33.13%), Postives = 161/329 (48.94%), Query Frame = 1
Query:  391 EASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGSEKGTDDRVAGAGGGGKAGXRSSHGXXXXXGNFRQRAETPGNTVHVQF----EGEQSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVHFPPTPEGERSAADAIKSLNGTTISELRVHCTMSR 1365
            E  T + KD  G   +  +FVGDL+R + ++ L    E HG V++V IKRD+ T  NLGYGFV+  +H+EA  AK+A+ GV + GR++R GWAQ+NT+L+VG LD       +     +  FAR+G L  + T  K    FG VKY+ R +AETAK EL+ +   G     +++ W   ++S Q                             H                   VHV+F    E +  Q S ++E  ++K F+++  V  + +P  R N       Q  + +GFVHF  + +GE SA  AI +L+GT I  L + C   R
Sbjct:   95 EGKTTNEKDKQG---DTIIFVGDLSRTVRDKDLRTVMEQHGTVVNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDS-----FVDESEYRAAFARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKK-IGKSKRPVRVIWG--DTSVQ----------------------------KH------------------CVHVKFDVGKEVKTIQDSDISEDDLQKVFSEYGQVQSVNLP--RHND------QSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNYGR 358          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7S2RB19_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB19_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.770e-34
Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = 1
Query:  403 NSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPG-------------AKFGFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQG 945
            N  +  PG  ++ NLFVGDLAR++TEE+L+ AFEPHGRV+ V +KRDR T +NLGYGFV++ SH EA  AKE+M G E+ GRRVRVGWA KN++L V  LD G     ++ E L   FARFGPLD + + ++P              A     K+  R HAE+AK+ L          P ++++W    S  +G
Sbjct:   43 NQRQPTPG--DDNNLFVGDLARDITEEELKDAFEPHGRVVEVLVKRDRLTHRNLGYGFVRMGSHAEACLAKESMHGREVAGRRVRVGWAMKNSTLVVKDLDPG-----LSEEDLLNAFARFGPLDLDQSGVRPAEPCSEEEEAGGSTALQAVFKFTQRTHAESAKQNLSGMMLASSSAP-LRVDWAGASSPDKG 228          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 145 bits (367), Expect = 9.550e-34
Identity = 75/148 (50.68%), Postives = 107/148 (72.30%), Query Frame = 1
Query:  433 EECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKFGFVKYRYRLHAETAKKELHDR 876
            E C LF+GDLAR L E++L +AF+P G V+SV IKRDR T  +LGYGFV L S ++A AAK+AM    +GGR +R+GWAQKNT+L++G LD      +IT+  L+  F +FGP+ +E T +K    +GFV++R+R HAE AK+E++++
Sbjct:   62 ERC-LFIGDLARGLNEDQLREAFDPFG-VISVEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLD-----PSITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK 201          
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Match: A0A7R9U4X6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.740e-28
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query:  439 CNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKP------GAKFG---FVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWN 921
            C+LFVGDL R+ TEE L+KAF P+G+++   +KRD+ +G+NLGYGF+KL +   A+ A   M GV + GRR+R+ +AQKN  L+V  L        +T + L+  F   GPLDKE   ++P      G K G    +K+ YR HAE+A+  +++R    G    ++++W+
Sbjct:   49 CHLFVGDLHRSTTEEDLQKAFSPYGKIVFAEVKRDKVSGRNLGYGFLKLDTEDGAQRALREMNGVPIKGRRIRINYAQKNCELHVTNL-----TEDVTKDELEAIFEEHGPLDKEHCVMRPAEPGFAGGKVGPSAIIKFLYRQHAESARDAVNNRVNLHGAL--LRVDWH 211          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7900.16857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4J2_9PHAE5.380e-18158.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP3_ECTSI1.520e-17575.49Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A7S3DFR0_9EUKA5.730e-3831.60Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S0DL40_9EUKA1.760e-3733.44Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
W7TSQ6_9STRA2.620e-3732.02Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S0TF52_9EUKA6.010e-3733.13Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
A0A7S3Z8S4_9EUKA2.300e-3533.13Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2RB19_9STRA2.770e-3444.85Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]
L8H825_ACACA9.550e-3450.68RNA recognition motif domain containing protein n=... [more]
A0A7R9U4X6_9STRA3.740e-2840.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7900contigL-elsbetiae_contig7900:1605..9201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score544.3
Seed ortholog evalue9.8e-152
Seed eggNOG ortholog2880.D7FNP3
KEGG rclassRC00331,RC00418,RC02600
KEGG koko:K17989
KEGG ReactionR00220,R00590,R00996
KEGG Pathwayko00260,ko00270,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map00290,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00570
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA binding
EggNOG OGsKOG0145@1,KOG0145@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-01_004780.1
EC4.3.1.17,4.3.1.19
COG Functional cat.DU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons11
Model size3519
Cds size2442
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816874.2106576-UTR-L-elsbetiae_contig7900:1604..26181622816874.2106576-UTR-L-elsbetiae_contig7900:1604..2618Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7900 1605..2618 -
1691683878.5500019-UTR-L-elsbetiae_contig7900:1604..26181691683878.5500019-UTR-L-elsbetiae_contig7900:1604..2618Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7900 1605..2618 -
1622816874.3567035-UTR-L-elsbetiae_contig7900:9138..92011622816874.3567035-UTR-L-elsbetiae_contig7900:9138..9201Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7900 9139..9201 -
1691683878.7184267-UTR-L-elsbetiae_contig7900:9138..92011691683878.7184267-UTR-L-elsbetiae_contig7900:9138..9201Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7900 9139..9201 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816874.2206647-CDS-L-elsbetiae_contig7900:2618..30831622816874.2206647-CDS-L-elsbetiae_contig7900:2618..3083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 2619..3083 -
1691683878.5634058-CDS-L-elsbetiae_contig7900:2618..30831691683878.5634058-CDS-L-elsbetiae_contig7900:2618..3083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 2619..3083 -
1622816874.2310596-CDS-L-elsbetiae_contig7900:3468..35991622816874.2310596-CDS-L-elsbetiae_contig7900:3468..3599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 3469..3599 -
1691683878.5744736-CDS-L-elsbetiae_contig7900:3468..35991691683878.5744736-CDS-L-elsbetiae_contig7900:3468..3599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 3469..3599 -
1622816874.2446861-CDS-L-elsbetiae_contig7900:3608..39391622816874.2446861-CDS-L-elsbetiae_contig7900:3608..3939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 3609..3939 -
1691683878.5847242-CDS-L-elsbetiae_contig7900:3608..39391691683878.5847242-CDS-L-elsbetiae_contig7900:3608..3939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 3609..3939 -
1622816874.2587054-CDS-L-elsbetiae_contig7900:4235..44691622816874.2587054-CDS-L-elsbetiae_contig7900:4235..4469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 4236..4469 -
1691683878.6060035-CDS-L-elsbetiae_contig7900:4235..44691691683878.6060035-CDS-L-elsbetiae_contig7900:4235..4469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 4236..4469 -
1622816874.2719882-CDS-L-elsbetiae_contig7900:5006..52341622816874.2719882-CDS-L-elsbetiae_contig7900:5006..5234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 5007..5234 -
1691683878.6198926-CDS-L-elsbetiae_contig7900:5006..52341691683878.6198926-CDS-L-elsbetiae_contig7900:5006..5234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 5007..5234 -
1622816874.2854698-CDS-L-elsbetiae_contig7900:5767..59701622816874.2854698-CDS-L-elsbetiae_contig7900:5767..5970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 5768..5970 -
1691683878.6321037-CDS-L-elsbetiae_contig7900:5767..59701691683878.6321037-CDS-L-elsbetiae_contig7900:5767..5970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 5768..5970 -
1622816874.2984853-CDS-L-elsbetiae_contig7900:6331..64391622816874.2984853-CDS-L-elsbetiae_contig7900:6331..6439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 6332..6439 -
1691683878.6437738-CDS-L-elsbetiae_contig7900:6331..64391691683878.6437738-CDS-L-elsbetiae_contig7900:6331..6439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 6332..6439 -
1622816874.3094475-CDS-L-elsbetiae_contig7900:6935..71131622816874.3094475-CDS-L-elsbetiae_contig7900:6935..7113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 6936..7113 -
1691683878.6655884-CDS-L-elsbetiae_contig7900:6935..71131691683878.6655884-CDS-L-elsbetiae_contig7900:6935..7113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 6936..7113 -
1622816874.3221345-CDS-L-elsbetiae_contig7900:7577..76881622816874.3221345-CDS-L-elsbetiae_contig7900:7577..7688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 7578..7688 -
1691683878.6795323-CDS-L-elsbetiae_contig7900:7577..76881691683878.6795323-CDS-L-elsbetiae_contig7900:7577..7688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 7578..7688 -
1622816874.3343284-CDS-L-elsbetiae_contig7900:8234..83571622816874.3343284-CDS-L-elsbetiae_contig7900:8234..8357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 8235..8357 -
1691683878.6901095-CDS-L-elsbetiae_contig7900:8234..83571691683878.6901095-CDS-L-elsbetiae_contig7900:8234..8357Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 8235..8357 -
1622816874.3460135-CDS-L-elsbetiae_contig7900:8808..91381622816874.3460135-CDS-L-elsbetiae_contig7900:8808..9138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 8809..9138 -
1691683878.7029877-CDS-L-elsbetiae_contig7900:8808..91381691683878.7029877-CDS-L-elsbetiae_contig7900:8808..9138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7900 8809..9138 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7900.16857.1prot_L-elsbetiae_contig7900.16857.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7900 2619..9138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7900.16857.1

>prot_L-elsbetiae_contig7900.16857.1 ID=prot_L-elsbetiae_contig7900.16857.1|Name=mRNA_L-elsbetiae_contig7900.16857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=814bp
MAPSADSGPPAPAAPAPEARAETAPAAVDSAPVVVTEVVTVASAETAAPV
VTTAAEESGTVVVVGGGLMNVGDLKDALPKTAEGAGAQEAAAAAVAPAEG
AGSAEKDEEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHG
RVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVG
WAQKNTSLYVGGLDGGQGAVAITTEMLQREFARFGPLDKELTAIKPGAKF
GFVKYRYRLHAETAKKELHDRPGFGGLCPSIQIEWNSIESSAQGSETAGS
EKGTDDRVAGAGGGGKAGGRSSHGAGAGGGNFRQRAETPGNTVHVQFEGE
QSQVSAVNEVMIRKCFTKWEPVVEIVIPASRFNGVSPGPRQLPRCWGFVH
FPPTPEGERSAADAIKSLNGTTISELRVHCTMSRSSGAGWRKQGGMGGGG
GGAGRSRRHSAGDSNRAMNHGGGGGQGFGGRPARSSMDGPLTPQGRGGGG
GWGGNGGMNRHNNMSMQMQQNRHLTGGGQQVSLPPHMQQQLPPHHHLQQP
HPHHQQQQHGGPLHPHQQAPHQHQQMYAAGFQAAGPAFAAGQYHVPAAVA
PTGPEGAGAAGGGGGGSGGNGGGGGGADMMVQTPYGMAPYPYAMSFQGVP
YAPAQQGYPMGYQQIYQGYPYANPQMPQAQQQQQQVPAGGAPAGPQQQQQ
QQAGPGAVPQGGPQQNAPPTVPLSGAKPSPTPQRQQQHMPMQQHAIIMAG
QGQQNPSTGGGGGLNVGVPSYMPPQMYQLPQQQQQLPGAGGEAAVDPATG
GVEGNNRGGGGGQ*
back to top

mRNA from alignment at L-elsbetiae_contig7900:1605..9201-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7900.16857.1 ID=mRNA_L-elsbetiae_contig7900.16857.1|Name=mRNA_L-elsbetiae_contig7900.16857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7597bp|location=Sequence derived from alignment at L-elsbetiae_contig7900:1605..9201- (Laminarionema elsbetiae ELsaHSoW15)
CCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCGAACGGCA GCGACCTTCGTCGATGGCGCCGTCCGCTGACTCCGGCCCGCCTGCCCCCG CCGCGCCGGCACCAGAGGCGCGAGCGGAGACGGCGCCCGCCGCCGTTGAT TCGGCACCGGTGGTGGTCACGGAGGTAGTCACCGTTGCGTCTGCCGAGAC GGCAGCGCCGGTGGTTACCACCGCGGCCGAGGAGAGCGGCACCGTCGTCG TGGTTGGGGGCGGCCTCATGAATGTCGGCGACCTGAAGGACGCCTTGCCT AAAACGGCGGAGGGCGCGGGAGCTCAAGAAGCGGCGGCAGCGGCGGTGGC GCCAGCAGAAGGGGCGGGATCTGCCGAGAAGGACGAGGAGGAGGTAGGCA GGCAGGCAGGCGCCCACACGCCCGGCCATTTTGATTTGTTGTTTGTTTCT CACATCCTCAGGGGCCGACATGGGGTCACAGAACAAGGCACACTCGACAC CGTGGAAGAAAATGTTGCGTGCTGTAGCGTATTCACGCCCTACGTACGTG TCTCCCTGCGGTTGCTGGTTTGTGGTTTCGATTGCGTTTTTTTTTTCTAT TGCCTGCCCTGTCTGTCTCTCTTGAAAGAAAAATCAATGCGACAAAAATT GGAACCGTGAATTGCACCTTCTAAATCAATCGATCAGTCAGCTGTTGGCT TGTCCATCTCCGCCACGCAGACCGTCCACATCAACACGCTCTCCCGCAGG CGCTACACCACGTAATCGTCTGTTGCGTATGTATCATGCATGCACCCTCC CTCTCTGACCCCAACACGATACACACACGCGCGCGCGCGCACAGGCGTCG ACGAACAGCTTGAAGGACGACCCCGGCACGCCAGAGGAGTGCAACCTCTT CGTGGGCGACCTGGCGAGGAACCTGACGGAAGAGAAGCTCGAGAAGGCCT TCGAACCGCACGGAAGGGTGAGGGTTAGGGTTCCTAAGTTTTGGGAGGGA ATCCAACGCGGGGTAGGGCGGCTTGTTGATATCGTCCACTCATTATGAGC TTCTGGATGTTTCTCGTATGTGTGTGTTGTGTGCGTGCATGGGTGTGTGT GTGTGTATTTTATTTTCACGCTCTGGTGGTCGGGGGAGGTGCTTGGTGTT TGCTGCTGAATGCTCTTGTGTCGTCATGGCTTTCTGGGTTTTGTCTTCCT GCCTGCCTGAATCGGTTCTCACGTCTTTGGCGTGCTCAAAAGAGCTGGCT CGTTTGCACGTGCCTGCTGTGCCTGTGTGTCCACCACGAAAACCGAAACA ACAAGAGTTCTTCACTCTTTGCAAACGGCGGCACCGTTCGCTTTCGCCGC CCAACCCCCCACCGATGCACCCACCCGCCCCGCCTGCTCTCTTTGTCCGT GGCGGTGCCCCTGTTTCTTTTGACGGTTGGATTTTATGGATCGCTGAAGA TGCCACGCCATATGCCATTATTTTATGTCTCGCTGCTGCTGTGTGCGTGC TACGCACCACCAGGTTATGTCGGTGTCCATCAAGCGCGACAGGGCCACCG GAAAGAACCTGGGATACGGCTTCGTCAAGCTGTCCTCTCACCAGGAGGCG CGGGCCGCCAAGGAGGCCATGCAGGTCCGTTTCGCCGGATCTTGGGTGTC CGTCCCATCATGGACTAGGCCGATATCAATATTACGGTTTAGCAGCAGAA GCAGCAAACAGCGAGCAGCGCTGGGAGAAATTGCTGTGCGTACTTACGTG CTGCAATATGCCCCCCAACTAACGAATTGAGCACCTAACTTCGTGGCGCA GAGACTGGTGCCACATCCCGGTGGCTTGTGTTATCTTGGAAGCCTCAAGA ACGCGGCGCACACAAATCACTCATCGTGCACGGCCAATTCAGGGTACACA GCAGCAGTCTGCCAACGGGAGCGCCATGGGCTTATGGAGGAAGAAAAAAC AAAAATTGCACGGTTGTTTCCGTCGAAGTTGAAAAAAAACTAACGGGTGT GTCGCCTGATTCGCGTATGCACGCACGCACGCCGTCATTTAATGCTGCCG CAAATGAATGAAACAATAAACCAAACGCAAAACCACAGGGCGTAGAACTG GGCGGACGGCGCGTGCGAGTGGGCTGGGCGCAGAAGAACACGTCCCTGTA CGTCGGCGGCCTTGACGGGGGGCAAGGGGCTGTCGCGATCACCACCGAGA TGCTCCAAAGAGAGTTCGCTCGATTCGGACCCCTGGACAAGGAATTGACG GCGATCAAACCCGGAGGTGAGAAGAGAGAGAGAGAGAGAAAATAAAACAG TAGCACACAGCGAATTGCAGTATTTAGTACCGCTCTACTGTATTGAATTT GAGTTCTGGGTGAGGGAAAATTAAGAAAAAAACAGAGGGAAAAGGAAACC CAAACGAAAAGCGAACTACTTGTTGCACAGGTTGGGAGTTCTATTCTGTG TGGTGTAAGCCTCAGACAGTAATAAAATAGAGTTTTTTTTTGCGTGTGCC TCAAAACAACGACCCCGCTGTACCGAGCTACATATTAATTTGTCTTGTTG TCCTGCCGCACGGCGGCTACCGTTATCCTTGCGCGTTTTTTTTTTTCGAT AAGAGGAGGAGGAGGCACGAACTCTTTTTGTCATGCCTATTTTAGGTATC TGAGGGTTCACTGATCTGAACCCTCGAGAAATGTAGCACGTGTCTGACAT CCCCCCTCCCCTCCCCCCCCGCTTGGGCGGACCCCGTTTAATGGCGCGCG CGAACTGCTCAGCCAAGTTTGGGTTCGTCAAGTACCGCTACCGCCTCCAT GCCGAGACGGCAAAGAAAGAGCTTCACGACCGCCCGGGCTTCGGTGGTCT CTGCCCCAGCATCCAGATCGGTGAGTCGAGTGCGTCTTGTCAAAAAAGGG AGGTAAATACGGAGGGTGGGGAGGGGGGCTCGACAGAAAAAGATCGCGGT GTGGGCGGTTTTGTTCTCTTGCTGGTGCCGATCAACGACAGGAAAAGCTC ACACTTTATTTCCAACTTTTGCATGCTATCGTGTGTTTGTTTTCTTTTTT TTGTTTCTTTCTCACCGATGCGATCAATTTTCATTTCTGGCGCGCGCTGA GTCTTGTCCCACTGAAGCCTTTTTTTTCTTGCTTATCCCGCCTGGCCTGC GTGCGTCCGTGTAATTTATTTTTTGACTTCCTCCTCTTTCTCCTCTTGGG ATACATGCATGCACGCACGCCGTAACCTCAGAGTGGAACAGCATCGAGTC TAGCGCCCAGGGGTCCGAGACGGCAGGCTCCGAAAAGGGCACTGACGACC GCGTCGCCGGTGCAGGCGGCGGCGGCAAGGCCGGAGGAAGGTCGTCGCAC GGCGCCGGCGCGGGCGGGGGAAACTTTCGCCAGCGCGCGGAGACCCCCGG CAACACCGTCCACGTGCAGTTCGAGGGCGAACAGGTAAAATATACATTTG GAAAAAGACAAGCCACGCTGTACCTTACCTGCGTACGTACGTACACGTGT GCGCGTGCGTACTACGTGTGCGCGTGCGTACTACATGTGCGCTCGCGTTT CATTCGTTTTTCCGCAGTACTTATTTTATGTTCATGTCGCATGTTTACCA CCCCTCCCGTATCACACGCCCAGGGGCCGTCTTGTCGCCGTGAACCGTGC TGCTGTGCAGTGGATCACACCACCTCTCGTTTCTTGCCATCGCGCGTGCT AATCTATCCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCC NNNNNNNNNNCCCCCTGCCCCGCGCTTCTTTGCAGTGCACCCCACCCCCC CCCCTTTCTTGCCCCCGCCCGTGCTAATCTACCCCCCCCCCCCCCCCCCC CCCAACCCCTTCCTCTCTGCCCACCTCAAAAATCAACCATTCTTTCCAAA AAAAAAATGTGCATCAGAGCCAGGTGTCCGCCGTCAACGAGGTGATGATC AGAAAGTGCTTCACCAAGTGGGAGCCCGTGGTTGAGATCGTCATCCCCGC GAGCCGTTTCAACGGCGTGTCCCCGGGCCCGCGGCAGCTCCCACGATGTT GGGGCTTCGTCCACTTCCCGCCGACCCCCGAAGGGGAACGCTCGGCGGCG GACGCCATCAAGAGCCTCAACGGCACCACCATCTCGGAGCTCAGGGTACG AGTGCGCCTCCCCCCCCCCATCCCCCTTCCCCCCCGCCCGCGCGTCTTTT TCTCTCTTGCCTTTTTTTGTTTTTTCAAAGTAATACTTCTATATCATAAG ACAACAACAACTTCGTCTCTGGGGCAGAGAGGGAGGGGGGGGTGGGGGGG CTTGCTGCAAGAGTTGCTAGAGCAACGGGCATCCGCTGCAACTTGACCCC GCTGCTCGTCATAATCATCACAAACTCGTTGTCATCGTATTATCCTTTAC ACGCGTCCCTCCTTGCCCAACCGCCGTGTTTTCTGCGTTGCCCTCTCCCC CCCCCCCCCCCCCCCCCTTTTTTATCCCCACCCGGGGCCCCGCCCCCCCC CCCCCCAACCCCCGCCCCGGCGCCCGCCGGGGCGCGCCGGGGGGGNNNNN NNNNNATCATACCCAACCCGCTGTCCTTGTATTATCCTTTACCCGCGTCC CTCCCTGCCCCACCCCCGTGTTTTCTGCGTTGCCCCCCCCCCCCCCCCCC CCCTATGTTATTAATCGCGAATCGCGGCACAGGTCCACTGCACCATGAGC CGCAGCAGCGGCGCCGGCTGGCGCAAGCAGGGTGGCATGGGCGGCGGCGG TGGCGGCGCCGGCAGGTCGAGGAGGCACAGCGCGGGCGACAGCAACCGTG CTATGAACCACGGCGGCGGCGGCGGACAGGGCTTCGGCGGCCGACCTGCT AGGTCCTCGATGGACGGCCCATTAACGCCTCAGGGGCGAGGGGGCGGTGG CGGATGGGGCGGAAATGTGAGTACTCCCCGCTCATTTTACTGTTCTTTTT TTTTCCCTTTTCCTCCCCGCTGGGTAGGCCGTCGAGCGTTGTACCTATCA ACCCGCAGCCAGAGAAAAATGTATGTAGGCTCGAAAGGGTCGATGCTTTA TTTTCGGCCGATAACTAGTTCTCCTGTTGCTTCTGTAGGGTTCTCGCCCG CGGTCCTCTCTCCCAACCGCGCCCGTCTCCCGGCCTCCCTGAGCTAACGG AACATTCACGTGCGCCCGCCCTCCCTCCCGTGTGTTTTCCGCCCTCCCTC GGACGAACGCAGGGCGGCATGAACCGTCACAACAACATGAGCATGCAGAT GCAGCAGAACCGCCACCTCACCGGCGGCGGCCAGCAGGTCTCCCTCCCGC CCCACATGCAGCAGCAGCTGCCCCCCCATCACCACCTCCAGCAGCCCCAC CCCCACCACCAGCAGCAGCAGCACGGCGGGCCCCTTCACCCCCACCAGCA GGCCCCGCACCAGCACCAGCAGATGTACGCCGCGGGCTTCCAGGCGGCCG GCCCGGCCTTCGCGGCGGGGCAGTACCACGTTCCGGCGGCCGTGGCGCCC ACCGGCCCCGAGGGGGCCGGTGCTGCCGGGGGTGGCGGGGGGGGTGCCGG AGGGAGCGGCGGTAACGGCGGCGGTGGCGGCGGTGCCGACATGATGGTTC AGACGCCCTACGGCATGGCTCCCTATCCCTATGCGATGTCCTTCCAGGGG GTCCCGTACGCACCGGCGCAGCAGGGGTACCCGGTGAGAATGCGGGCACG ACGGAGGTTGCACCTTCGCTTTTTTGGGTGGGAAAAGTTAGAGCGTAATC TGTATGCATGACTCTGGTGTGCGTGTAAGACGTTGCATACTTTTGGTTGG AACAACACCGACGATTATCGTTGCATCATGGTTCGTATTTGGGTACGAGT AATTGTACATACATACATGCGGCGAAATAAGGAGCGCGGCCCTTATTCAT ACATATGTATGTACAGGTGTCACCACATGATCGTGTCCCGTACGCGAGCC TCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTAACCCCCGTCTTCTTCTTT CTACCCTTCCCTCCCCCCCTTTGGCACGATGTCAACCAACATCGGCAAAA ACTTACCGCGTTCCCCAGATGGGCTATCAGCAAATCTACCAGGGTTACCC CTACGCGAACCCCCAAATGCCCCAGGCGCAGCAGCAGCAGCAGCAGGTGC CGGCAGGGGGAGCCCCAGCCGGCCCTCAGCAGCAGCAGCAGCAGCAGGCG GGGCCTGGCGCCGTTCCTCAGGGCGGTCCTCAGCAGAACGCCCCCCCGAC GGTGCCACTGTCCGGTGCCAAGCCGTCGCCGACCCCTCAGAGGCAGCAGC AGCACATGCCGATGCAGCAGCACGCGATCATTATGGCGGGGCAGGGGCAG CAGAACCCATCGACGGGCGGTGGCGGCGGCCTGAACGTGGGCGTGCCGTC CTACATGCCCCCGCAGATGTACCAACTCCCGCAGCAGCAGCAGCAGCTTC CCGGCGCCGGTGGCGAGGCGGCGGTTGACCCGGCTACGGGCGGCGTCGAA GGCAACAACCGCGGCGGCGGTGGCGGCCAATAAGAAGAACGGGAGAATAT CATATCGCCGCGCAAGTGACGTCTCTCGTTTTCCTGGAAATATAGCACGG GTCGGTGCGATGTGACGTTTACGGTGTGCCGCGACGTTGAAACGTCGGGT TGGTGATTGGTTGGTTGGTTGAAGGACGGTTGGTTCCGGTTGATCGGCTT GTTGGGGTCTCTGAAGCTGGTTGAATGGGTGGACTGATCGCTCTCCCTCT CAAAAGAGTTTTGAAGTAGGGGTCGGTAGGCGGCAACATCTGGGGGGCAG GCCGCCGGCCACAACCCCTCTCAAGTATTGACAGAATCGAGAGGGTTAGG TGCGCTCTGCAAGAGCAGCCAGACAAGAAAGACTCATTCCGTATTGGTCC GACAACACACACAAACGCGCGCGCGAGCGCGCGAAAAAGTCGGCAAAGAT TGTGAAAGATTCGTTCGGAAGAGGGCAGGCCGCGGGGAGGAGGAGGAGGA GGAAAGGTTGGAATATTAAAATCGAAAAAGAGTTCACACCGTGTACATAA TGTGCGGGGAGAGAGCAGCTTTATTTCGCATTACTTGGTGCGTTTCCAGA GCAAATTGGGATATCTTTGTTTACGACCCACGAGCCACCAGCGTTGTGTT TTGTTTTACGACCCACGGAGCCACCGGCGACAGCTAGCTCGCTTACCTGC GCCCAACTTATTGGGCGCGGAAAGTTTGTTGGGTGGAGCGGAGCGGTCGC GGCATGAAACCGACCCTCAGGAAGTGGAGGGTGAAAGCGAAAAATTTAGG GAGAGGGGTAACTGTTGCGTCTACCGTTAGAGGAAACACAGCCGACCACA CTCCGACTTGCTGAGGGGCTGCGTGCCCCTAGGGAGTGGGTGCCACACGT GTGTCTTTGATGGGGATAGGCGTCGGGTGCAGGGCTGGAAGGGGGGTATT TGTAGGGCGGCGAGGAAACGATGGGCACACTTGCATGTTAGTGGTGTGGG AAATTTGTTGTGTATGAGTAGTAGTGTTTCTGTGAGAAGTGGTAGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7900:1605..9201-

>mRNA_L-elsbetiae_contig7900.16857.1 ID=mRNA_L-elsbetiae_contig7900.16857.1|Name=mRNA_L-elsbetiae_contig7900.16857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4884bp|location=Sequence derived from alignment at L-elsbetiae_contig7900:1605..9201- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCCGTCCGCTGACTCCGGCCCGCCTGCCCCCGCCGCGCCGGCACC
AGAGGCGCGAGCGGAGACGGCGCCCGCCGCCGTTGATTCGGCACCGGTGG
TGGTCACGGAGGTAGTCACCGTTGCGTCTGCCGAGACGGCAGCGCCGGTG
GTTACCACCGCGGCCGAGGAGAGCGGCACCGTCGTCGTGGTTGGGGGCGG
CCTCATGAATGTCGGCGACCTGAAGGACGCCTTGCCTAAAACGGCGGAGG
GCGCGGGAGCTCAAGAAGCGGCGGCAGCGGCGGTGGCGCCAGCAGAAGGG
GCGGGATCTGCCGAGAAGGACGAGGAGGAGATGGCGCCGTCCGCTGACTC
CGGCCCGCCTGCCCCCGCCGCGCCGGCACCAGAGGCGCGAGCGGAGACGG
CGCCCGCCGCCGTTGATTCGGCACCGGTGGTGGTCACGGAGGTAGTCACC
GTTGCGTCTGCCGAGACGGCAGCGCCGGTGGTTACCACCGCGGCCGAGGA
GAGCGGCACCGTCGTCGTGGTTGGGGGCGGCCTCATGAATGTCGGCGACC
TGAAGGACGCCTTGCCTAAAACGGCGGAGGGCGCGGGAGCTCAAGAAGCG
GCGGCAGCGGCGGTGGCGCCAGCAGAAGGGGCGGGATCTGCCGAGAAGGA
CGAGGAGGAGGCGTCGACGAACAGCTTGAAGGACGACCCCGGCACGCCAG
AGGAGTGCAACCTCTTCGTGGGCGACCTGGCGAGGAACCTGACGGAAGAG
AAGCTCGAGAAGGCCTTCGAACCGCACGGAAGGGCGTCGACGAACAGCTT
GAAGGACGACCCCGGCACGCCAGAGGAGTGCAACCTCTTCGTGGGCGACC
TGGCGAGGAACCTGACGGAAGAGAAGCTCGAGAAGGCCTTCGAACCGCAC
GGAAGGGTTATGTCGGTGTCCATCAAGCGCGACAGGGCCACCGGAAAGAA
CCTGGGATACGGCTTCGTCAAGCTGTCCTCTCACCAGGAGGCGCGGGCCG
CCAAGGAGGCCATGCAGGTTATGTCGGTGTCCATCAAGCGCGACAGGGCC
ACCGGAAAGAACCTGGGATACGGCTTCGTCAAGCTGTCCTCTCACCAGGA
GGCGCGGGCCGCCAAGGAGGCCATGCAGGGCGTAGAACTGGGCGGACGGC
GCGTGCGAGTGGGCTGGGCGCAGAAGAACACGTCCCTGTACGTCGGCGGC
CTTGACGGGGGGCAAGGGGCTGTCGCGATCACCACCGAGATGCTCCAAAG
AGAGTTCGCTCGATTCGGACCCCTGGACAAGGAATTGACGGCGATCAAAC
CCGGAGGGCGTAGAACTGGGCGGACGGCGCGTGCGAGTGGGCTGGGCGCA
GAAGAACACGTCCCTGTACGTCGGCGGCCTTGACGGGGGGCAAGGGGCTG
TCGCGATCACCACCGAGATGCTCCAAAGAGAGTTCGCTCGATTCGGACCC
CTGGACAAGGAATTGACGGCGATCAAACCCGGAGCCAAGTTTGGGTTCGT
CAAGTACCGCTACCGCCTCCATGCCGAGACGGCAAAGAAAGAGCTTCACG
ACCGCCCGGGCTTCGGTGGTCTCTGCCCCAGCATCCAGATCGCCAAGTTT
GGGTTCGTCAAGTACCGCTACCGCCTCCATGCCGAGACGGCAAAGAAAGA
GCTTCACGACCGCCCGGGCTTCGGTGGTCTCTGCCCCAGCATCCAGATCG
AGTGGAACAGCATCGAGTCTAGCGCCCAGGGGTCCGAGACGGCAGGCTCC
GAAAAGGGCACTGACGACCGCGTCGCCGGTGCAGGCGGCGGCGGCAAGGC
CGGAGGAAGGTCGTCGCACGGCGCCGGCGCGGGCGGGGGAAACTTTCGCC
AGCGCGCGGAGACCCCCGGCAACACCGTCCACGTGCAGTTCGAGGGCGAA
CAGAGTGGAACAGCATCGAGTCTAGCGCCCAGGGGTCCGAGACGGCAGGC
TCCGAAAAGGGCACTGACGACCGCGTCGCCGGTGCAGGCGGCGGCGGCAA
GGCCGGAGGAAGGTCGTCGCACGGCGCCGGCGCGGGCGGGGGAAACTTTC
GCCAGCGCGCGGAGACCCCCGGCAACACCGTCCACGTGCAGTTCGAGGGC
GAACAGAGCCAGGTGTCCGCCGTCAACGAGGTGATGATCAGAAAGTGCTT
CACCAAGTGGGAGCCCGTGGTTGAGATCGTCATCCCCGCGAGCCGTTTCA
ACGGCGTGTCCCCGGGCCCGCGGCAGCTCCCACGATGTTGGGGCTTCGTC
CACTTCCCGCCGACCCCCGAAGGGGAACGCTCGGCGGCGGACGCCATCAA
GAGCCTCAACGGCACCACCATCTCGGAGCTCAGGAGCCAGGTGTCCGCCG
TCAACGAGGTGATGATCAGAAAGTGCTTCACCAAGTGGGAGCCCGTGGTT
GAGATCGTCATCCCCGCGAGCCGTTTCAACGGCGTGTCCCCGGGCCCGCG
GCAGCTCCCACGATGTTGGGGCTTCGTCCACTTCCCGCCGACCCCCGAAG
GGGAACGCTCGGCGGCGGACGCCATCAAGAGCCTCAACGGCACCACCATC
TCGGAGCTCAGGGTCCACTGCACCATGAGCCGCAGCAGCGGCGCCGGCTG
GCGCAAGCAGGGTGGCATGGGCGGCGGCGGTGGCGGCGCCGGCAGGTCGA
GGAGGCACAGCGCGGGCGACAGCAACCGTGCTATGAACCACGGCGGCGGC
GGCGGACAGGGCTTCGGCGGCCGACCTGCTAGGTCCTCGATGGACGGCCC
ATTAACGCCTCAGGGGCGAGGGGGCGGTGGCGGATGGGGCGGAAATGTCC
ACTGCACCATGAGCCGCAGCAGCGGCGCCGGCTGGCGCAAGCAGGGTGGC
ATGGGCGGCGGCGGTGGCGGCGCCGGCAGGTCGAGGAGGCACAGCGCGGG
CGACAGCAACCGTGCTATGAACCACGGCGGCGGCGGCGGACAGGGCTTCG
GCGGCCGACCTGCTAGGTCCTCGATGGACGGCCCATTAACGCCTCAGGGG
CGAGGGGGCGGTGGCGGATGGGGCGGAAATGGCGGCATGAACCGTCACAA
CAACATGAGCATGCAGATGCAGCAGAACCGCCACCTCACCGGCGGCGGCC
AGCAGGTCTCCCTCCCGCCCCACATGCAGCAGCAGCTGCCCCCCCATCAC
CACCTCCAGCAGCCCCACCCCCACCACCAGCAGCAGCAGCACGGCGGGCC
CCTTCACCCCCACCAGCAGGCCCCGCACCAGCACCAGCAGATGTACGCCG
CGGGCTTCCAGGCGGCCGGCCCGGCCTTCGCGGCGGGGCAGTACCACGTT
CCGGCGGCCGTGGCGCCCACCGGCCCCGAGGGGGCCGGTGCTGCCGGGGG
TGGCGGGGGGGGGCGGCATGAACCGTCACAACAACATGAGCATGCAGATG
CAGCAGAACCGCCACCTCACCGGCGGCGGCCAGCAGGTCTCCCTCCCGCC
CCACATGCAGCAGCAGCTGCCCCCCCATCACCACCTCCAGCAGCCCCACC
CCCACCACCAGCAGCAGCAGCACGGCGGGCCCCTTCACCCCCACCAGCAG
GCCCCGCACCAGCACCAGCAGATGTACGCCGCGGGCTTCCAGGCGGCCGG
CCCGGCCTTCGCGGCGGGGCAGTACCACGTTCCGGCGGCCGTGGCGCCCA
CCGGCCCCGAGGGGGCCGGTGCTGCCGGGGGTGGCGGGGGGGGGAGCGGC
GGTAACGGCGGCGGTGGCGGCGGTGCCGACATGATGGTTCAGACGCCCTA
CGGCATGGCTCCCTATCCCTATGCGATGTCCTTCCAGGGGGTCCCGTACG
CACCGGCGCAGCAGGGGTACCCGGGAGCGGCGGTAACGGCGGCGGTGGCG
GCGGTGCCGACATGATGGTTCAGACGCCCTACGGCATGGCTCCCTATCCC
TATGCGATGTCCTTCCAGGGGGTCCCGTACGCACCGGCGCAGCAGGGGTA
CCCGATGGGCTATCAGCAAATCTACCAGGGTTACCCCTACGCGAACCCCC
AAATGCCCCAGGCGCAGCAGCAGCAGCAGCAGGTGCCGGCAGGGGGAGCC
CCAGCCGGCCCTCAGCAGCAGCAGCAGCAGCAGGCGGGGCCTGGCGCCGT
TCCTCAGGGCGGTCCTCAGCAGAACGCCCCCCCGACGGTGCCACTGTCCG
GTGCCAAGCCGTCGCCGACCCCTCAGAGGCAGCAGCAGCACATGCCGATG
CAGCAGCACGCGATCATTATGGCGGGGCAGGGGCAGCAGAACCCATCGAC
GGGCGGTGGCGGCGGCCTGAACGTGGGCGTGCCGTCCTACATGCCCCCGC
AGATGTACCAACTCCCGCAGCAGCAGCAGCAGCTTCCCGGCGCCGGTGGC
GAGGCGGCGGTTGACCCGGCTACGGGCGGCGTCGAAGGCAACAACCGCGG
CGGCGGTGGCGGCCAATAAATGGGCTATCAGCAAATCTACCAGGGTTACC
CCTACGCGAACCCCCAAATGCCCCAGGCGCAGCAGCAGCAGCAGCAGGTG
CCGGCAGGGGGAGCCCCAGCCGGCCCTCAGCAGCAGCAGCAGCAGCAGGC
GGGGCCTGGCGCCGTTCCTCAGGGCGGTCCTCAGCAGAACGCCCCCCCGA
CGGTGCCACTGTCCGGTGCCAAGCCGTCGCCGACCCCTCAGAGGCAGCAG
CAGCACATGCCGATGCAGCAGCACGCGATCATTATGGCGGGGCAGGGGCA
GCAGAACCCATCGACGGGCGGTGGCGGCGGCCTGAACGTGGGCGTGCCGT
CCTACATGCCCCCGCAGATGTACCAACTCCCGCAGCAGCAGCAGCAGCTT
CCCGGCGCCGGTGGCGAGGCGGCGGTTGACCCGGCTACGGGCGGCGTCGA
AGGCAACAACCGCGGCGGCGGTGGCGGCCAATAA
back to top