mRNA_L-elsbetiae_contig7893.16842.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI) HSP 1 Score: 105 bits (262), Expect = 3.040e-23 Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 DDSL+DALRSNLTRLIAYAKSADP LQRQVAEKLANEAVKP+RQAQIV+LGGLKLLLPL Sbjct: 19 DDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPL 77
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.450e-17 Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 D+ +DAL+ NL RLIAYAKSAD +LQR+VAEKLANEAVKP+RQ QIVEL GLKLLLPL Sbjct: 20 DEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.900e-17 Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 D+ +DAL+ NL RLIAYAKSAD +LQR+VAEKLANEAVKP+RQ QIVEL GLKLLLPL Sbjct: 20 DEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.270e-16 Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 DD+ ++ALR NL RLI YAKSAD LQR+VAEKLANEAVKP+RQ QIVEL GLKLLLPL Sbjct: 21 DDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPL 79
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A2D4C729_PYTIN (Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C729_PYTIN) HSP 1 Score: 85.9 bits (211), Expect = 5.560e-16 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 +D+ ++ALR NL RLI YAKSAD LQR+VAEKLANEAVKP+RQ QIVEL GLKLLLPL Sbjct: 20 EDTFTEALRVNLQRLIVYAKSADSTLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.400e-15 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 D+ LS ALR +L+RLIAYA+SAD LQRQVAEKLANEAV+P RQ QI ELGGL+LLLPL Sbjct: 20 DEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPL 78
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.690e-15 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 D+ ++AL+ NL RLIAYAKSAD LQR+VAEKLANEAVKP+RQ QIVEL GL+LLLPL Sbjct: 19 DEGFTEALQINLQRLIAYAKSADTSLQREVAEKLANEAVKPDRQVQIVELCGLELLLPL 77
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 1.000e-14 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 ++ L+ LR +L+RLI YA+SAD LQRQVAEKLANEAVKP RQ QIVELGGLKLLLPL Sbjct: 22 EEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPL 80
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: A0A7S3H3P5_9STRA (Vacuolar protein 8 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3P5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.690e-14 Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 19 ALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 +L+ NL+RLIAYA+SAD LQR+VAEKLANEAVKPNRQ QIVE GGLKLL+PL Sbjct: 36 SLQVNLSRLIAYAESADVKLQREVAEKLANEAVKPNRQVQIVEYGGLKLLVPL 88
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Match: H3HCQ8_PHYRM (Vacuolar protein 8 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ8_PHYRM) HSP 1 Score: 82.8 bits (203), Expect = 3.170e-14 Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 1 DDSLSDALRSNLTRLIAYAKSADPDLQRQVAEKLANEAVKPNRQAQIVELGGLKLLLPL 177 D++ ++ALR NL RLI YA+SAD LQR+VAEKLANEAVKP+RQ QIVEL GL+LLLPL Sbjct: 198 DEAFTEALRVNLQRLIVYARSADTALQREVAEKLANEAVKPDRQVQIVELDGLELLLPL 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7893.16842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7893.16842.1 >prot_L-elsbetiae_contig7893.16842.1 ID=prot_L-elsbetiae_contig7893.16842.1|Name=mRNA_L-elsbetiae_contig7893.16842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp MAQEGGIDMLVAMLESTHPNLQRQASKALANLGVNSNNKERICKAGGVEPback to top mRNA from alignment at L-elsbetiae_contig7893:294..3426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7893.16842.1 ID=mRNA_L-elsbetiae_contig7893.16842.1|Name=mRNA_L-elsbetiae_contig7893.16842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3133bp|location=Sequence derived from alignment at L-elsbetiae_contig7893:294..3426+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7893:294..3426+ >mRNA_L-elsbetiae_contig7893.16842.1 ID=mRNA_L-elsbetiae_contig7893.16842.1|Name=mRNA_L-elsbetiae_contig7893.16842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig7893:294..3426+ (Laminarionema elsbetiae ELsaHSoW15)back to top |