mRNA_L-elsbetiae_contig7886.16836.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI) HSP 1 Score: 264 bits (675), Expect = 4.110e-89 Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 1 Query: 1 HSGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 HSGMQSPLSFGGFACLTRHVKRISEALSEALE DLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVD NLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPL RVLAGVTLDAPLSIPPLLLHVG++PLADW G Sbjct: 4 HSGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 141
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 254 bits (650), Expect = 5.190e-79 Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SGMQSPLSFGGFACLTRH+KRISEALSEALE DLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERV NLIVDLLANNF+SMDKLGNPVLKPFLQDVVQFGPL RVL GVTLDAPLSIPPLLLHVG++PLADW G Sbjct: 471 SGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLIVDLLANNFRSMDKLGNPVLKPFLQDVVQFGPLARVLVGVTLDAPLSIPPLLLHVGIVPLADWIG 607
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A150GR87_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR87_GONPE) HSP 1 Score: 170 bits (431), Expect = 5.410e-48 Identity = 80/137 (58.39%), Postives = 107/137 (78.10%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF LTRH+ R+++AL+EALE+D +D+ SLGLV+AY P L+S+WM QK+MSV +G+ P LI +LA NFK+M++LG PV+KPFLQDV+QFGP+++ + L PLSIP L+ HVG PL +W G Sbjct: 324 SGLQSPLSFGGFGALTRHLARLTDALTEALEADCVDRGSLGLVHAYNPGLSSSWMMQKAMSVRLGDTPSPQLINRMLAGNFKAMERLGEPVMKPFLQDVIQFGPMVQTMGAQMLTDPLSIPGLIAHVGPGPLLEWLG 460
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A8J4AY36_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AY36_9CHLO) HSP 1 Score: 171 bits (434), Expect = 1.040e-47 Identity = 80/137 (58.39%), Postives = 109/137 (79.56%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF LTRH+ R++ AL+EA+E+D LD++SL LV+AY P L+S+WM QK+MSV GE+ P+LI +LA NFK+M++LG+PV+KPFLQDV++FGP++R + L PLSIP L+ HVG +PL +W G Sbjct: 440 SGLQSPLSFGGFGALTRHLARLTTALAEAVETDALDRESLALVHAYNPGLSSSWMMQKAMSVRKGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVIKFGPMMRTMTAQMLTDPLSIPGLISHVGPMPLLEWLG 576
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: D8THU2_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8THU2_VOLCA) HSP 1 Score: 167 bits (422), Expect = 5.700e-47 Identity = 80/135 (59.26%), Postives = 105/135 (77.78%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADW 408 SG+QSPLSFGGF LTRH+ R++ AL+EA+E+D LD+ SL LV +Y P L+S+WM QK+MSV GE+ P+LI +LA NFK+M++LG+PV+KPFLQDVVQFGP++R +A L P SIP L+ HVG PL +W Sbjct: 285 SGLQSPLSFGGFGALTRHLARLTAALTEAVEADALDRGSLSLVQSYNPGLSSSWMMQKAMSVRRGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVVQFGPMMRTMAAQILTDPASIPSLIRHVGPAPLLEW 419
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A8HX01_CHLRE (Glycine/D-amino acid oxidase-like protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HX01_CHLRE) HSP 1 Score: 163 bits (413), Expect = 2.940e-45 Identity = 77/137 (56.20%), Postives = 102/137 (74.45%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF LTRH+ R++ AL+EA E+D LD+ SLGL++AY P L+S+WM QK+MSV G++ P LI +LA NF++M+KLG +KPFLQDV+QF P+L + L PLS+P L+ HVG PLA+W G Sbjct: 337 SGLQSPLSFGGFGALTRHLARLTNALTEAAEADALDRNSLGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELINRMLAGNFRAMEKLGEATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLG 473
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A836C4K2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4K2_9CHLO) HSP 1 Score: 165 bits (417), Expect = 3.710e-45 Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF LTRH+ R+++ALSEALE+DLLDK SLG V AY P L+S+WM Q++MSV G+ P+LI +LA NF+SM + G+PV+KPFLQDV+QFGP++ L P SIP L+ HVG PL +W G Sbjct: 468 SGLQSPLSFGGFGALTRHLARLNKALSEALEADLLDKASLGRVAAYNPGLSSSWMMQRAMSVRQGDAPTPDLINRMLAGNFRSMQRFGDPVMKPFLQDVIQFGPMMTTLTAQMFGDPASIPRLISHVGPGPLLEWVG 604
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A835T427_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835T427_CHLIN) HSP 1 Score: 164 bits (415), Expect = 7.750e-45 Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF LTRH+ R++ AL+EA+E+D LD+ +LGL++AY P L+S+WM QK+MSV G++ P LI +LA NF++M+KLG+ +KPFLQDV+QF P+L + L PLS+P L+ HVG PLA+W G Sbjct: 474 SGLQSPLSFGGFGALTRHLARLTNALTEAMEADALDRNALGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELISRMLAGNFRAMEKLGDATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLG 610
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK) HSP 1 Score: 163 bits (412), Expect = 8.490e-45 Identity = 77/137 (56.20%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADWTG 414 SG+QSPLSFGGF CLTRH+ R++ AL++ + D L ++ L LVNAYQP+L+ WMFQK+MSV VG+R P ++V L NNF +M+ G+PVL+PFLQDVVQF LL+ L + PL++PPLL HVG+ L DW G Sbjct: 364 SGIQSPLSFGGFVCLTRHIGRLTGALADCVRLDRLSREDLALVNAYQPNLSGAWMFQKAMSVAVGQRAAPGIVVRTLQNNFGAMNSFGDPVLRPFLQDVVQFDLLLKTLVQAFILDPLAVPPLLFHVGLPALIDWMG 500
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO) HSP 1 Score: 162 bits (411), Expect = 1.730e-44 Identity = 79/135 (58.52%), Postives = 97/135 (71.85%), Query Frame = 1 Query: 4 SGMQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDPNLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLLRVLAGVTLDAPLSIPPLLLHVGVLPLADW 408 SG+QSPLSFGGF LTRH+ R+ A++EAL+++ LDK SL VNAY P L+ WM Q++MSV GER DPN I LLA NF +M + G+PVLKPFLQDVVQ+GPL L L PL +P + HVGVLP+ DW Sbjct: 430 SGIQSPLSFGGFGALTRHLGRLRSAITEALDAEALDKDSLAQVNAYNPGLSGAWMLQRAMSVRPGERPDPNFINSLLAKNFAAMQRFGDPVLKPFLQDVVQYGPLGLTLVSQMLSDPLFVPAIFRHVGVLPMLDW 564 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7886.16836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7886.16836.1 >prot_L-elsbetiae_contig7886.16836.1 ID=prot_L-elsbetiae_contig7886.16836.1|Name=mRNA_L-elsbetiae_contig7886.16836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp MQSPLSFGGFACLTRHVKRISEALSEALESDLLDKKSLGLVNAYQPSLTSback to top mRNA from alignment at L-elsbetiae_contig7886:2673..7071+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7886.16836.1 ID=mRNA_L-elsbetiae_contig7886.16836.1|Name=mRNA_L-elsbetiae_contig7886.16836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4399bp|location=Sequence derived from alignment at L-elsbetiae_contig7886:2673..7071+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7886:2673..7071+ >mRNA_L-elsbetiae_contig7886.16836.1 ID=mRNA_L-elsbetiae_contig7886.16836.1|Name=mRNA_L-elsbetiae_contig7886.16836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig7886:2673..7071+ (Laminarionema elsbetiae ELsaHSoW15)back to top |