mRNA_L-elsbetiae_contig7744.16687.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7744.16687.1
Unique NamemRNA_L-elsbetiae_contig7744.16687.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.640e-58
Identity = 136/266 (51.13%), Postives = 153/266 (57.52%), Query Frame = 3 
Query:    6 QDADVDAVAGLAARMSIDGGGMGAPNTVEDDQ-------FAAGPSVDGGSGGND--GWGVETQLARADQEPGGHKTDIYSEVHRALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYVCGHDKCAGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXGVVGXXXXXSRYYDGSFSAESHRTDSNTSS-GSQMERDGEGAGQPAKHGLGGAGGWATMEMGL 773
            Q  DVD VAGL A+MSID G   AP+  E +        +       G  GG +   WG   QLAR       H    YSEV +ALQML EVDSVLEQL++FWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQ+VCNKYVCGH KC G  G                                D G           YDGS++A S+RTDSN SS G+Q E       +P+K GLG  GGW  ++MG 
Sbjct:  878 QGVDVDGVAGLTAKMSIDDG-ADAPSGQEAEMPPXXXXXWVGXXXXXGEQGGGEHGAWGGGMQLARV------HDDTCYSEVKQALQMLQEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQSVCNKYVCGHHKCGGLQGASTPKGAARPRSDSMGA---------------DAGATA--------YDGSYNASSNRTDSNASSVGAQSEA------EPSKQGLGDGGGWGNVDMGF 1107
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A6H5L327_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L327_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.300e-56
Identity = 133/266 (50.00%), Postives = 152/266 (57.14%), Query Frame = 3 
Query:    6 QDADVDAVAGLAARMSIDGGGMGAPNTVEDDQ--------FAAGPSVDGGSGGNDG-WGVETQLARADQEPGGHKTDIYSEVHRALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYVCGHDKCAGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXGVVGXXXXXSRYYDGSFSAESHRTDSNTSS-GSQMERDGEGAGQPAKHGLGGAGGWATMEMGL 773
            Q ADVD VAG+ A  SIDG    AP+  E +           AG       GG  G WG   QLAR +++        YSEV +AL+ L E+DSVLEQL++FWANSEVIFDVLLRKGDLVEKFV FANKPRLLQRFRERLADYKRFWEGVQ+VCNKYVCG  KC G  G                                D G           YDGS+SA S+RTDSNTSS G+Q E       +P+K GLG   GWA ++MG 
Sbjct:  449 QGADVDGVAGITANTSIDG--ADAPSGQEAEMPPLPPRQWVGAGAGAGEQEGGEHGAWGGGMQLARMNEDT------CYSEVQQALETLQEIDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVTFANKPRLLQRFRERLADYKRFWEGVQSVCNKYVCGQHKCGGLQGTSTPKGTERARSDSTAA---------------DSGATA--------YDGSYSASSNRTDSNTSSAGTQSEA------EPSKQGLGVGVGWANVDMGF 677
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.020e-20
Identity = 42/76 (55.26%), Postives = 60/76 (78.95%), Query Frame = 3 
Query:  231 ALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYVCG 458
            AL+ L +VD +LE+LS+FWAN+EV+ D+L +KG+ VE+FV FA+KP+L  RF ER+ +YKRFWE V  +C+ Y+ G
Sbjct:  839 ALKKLRQVDMILEELSVFWANTEVVLDLLSKKGEHVEQFVGFASKPKLKARFLERMEEYKRFWENVSMMCSNYIAG 914
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A4D9CUB5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUB5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.510e-17
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 3 
Query:  219 EVHRALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYV 452
            E+   L  L +VD +LE L++FWA +EVI +VLL+K + VE+FVA+++KPRL  RF ERL +Y+ FW GVQ +C+++ 
Sbjct:  202 ELSLVLAKLQDVDQILEHLAVFWAQTEVILEVLLQKSEHVERFVAYSHKPRLKDRFLERLDEYRAFWVGVQGMCHQFT 279
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A7S4EAJ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAJ2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.810e-16
Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 3 
Query:  231 ALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNV 437
            AL+ L  VD+VLE+L++ W ++EV+FD LL+K + +EKF+ FA +P+LL RFR+RLA+YKRFW  VQ V
Sbjct:  569 ALRQLERVDAVLERLALLWDSTEVVFDTLLQKSEHIEKFLEFAREPQLLGRFRQRLAEYKRFWVDVQAV 637
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A7S2WF18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF18_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.810e-13
Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 3 
Query:  240 MLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYV 452
            +L ++D+ LE  +I WAN EV+FDV+L+KGD +++FV F   PRL++RF+ R++DY+ FW  +Q +    V
Sbjct:  139 ILDKIDAQLESSTILWANIEVVFDVMLKKGDHIDQFVDFGKNPRLMERFQARMSDYQYFWNYIQVMATANV 209
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A7S3UW18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW18_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 2.870e-13
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 3 
Query:  222 VHRALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYVCG 458
            V + L  L+ +D V++ L   W+N EV+ ++L+ K +  EKFV +A+KP +LQRF+ RL +Y RFW+ +Q VC ++  G
Sbjct:  384 VAKLLGDLYRIDQVMDILGALWSNIEVVLEILVVKAEHTEKFVQYASKPAILQRFKTRLNEYYRFWKSIQTVCQQFFLG 462
[Close]
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Match: A0A7S2WFE1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFE1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.140e-12
Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 3 
Query:  240 MLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYV 452
            +L ++D+ LE  +I WAN EV+FDV+L+KGD +++FV F   PRL++RF+ R++DY+ FW  +Q +    V
Sbjct:  672 ILDKIDAQLESSTILWANIEVVFDVMLKKGDHIDQFVDFGKNPRLMERFQARMSDYQYFWNYIQVMATANV 742
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7744.16687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G8N3_ECTSI2.640e-5851.13Calcium/ calmodulin-dependent protein kinase 1 n=1... [more]
A0A6H5L327_9PHAE1.300e-5650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3HNC2_9STRA3.020e-2055.26Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9CUB5_9STRA2.510e-1750.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4EAJ2_9STRA5.810e-1656.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WF18_9STRA1.810e-1345.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3UW18_HETAK2.870e-1341.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WFE1_9STRA1.140e-1245.07Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7744contigL-elsbetiae_contig7744:1421..4236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.5
Seed ortholog evalue1.8e-48
Seed eggNOG ortholog2880.D7G8N3
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.17
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons4
Model size805
Cds size756
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7744.16687.1prot_L-elsbetiae_contig7744.16687.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7744 1468..4234 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816859.1447544-UTR-L-elsbetiae_contig7744:1420..14671622816859.1447544-UTR-L-elsbetiae_contig7744:1420..1467Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7744 1421..1467 +
1691683867.0761516-UTR-L-elsbetiae_contig7744:1420..14671691683867.0761516-UTR-L-elsbetiae_contig7744:1420..1467Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7744 1421..1467 +
1622816859.2039466-UTR-L-elsbetiae_contig7744:4234..42361622816859.2039466-UTR-L-elsbetiae_contig7744:4234..4236Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7744 4235..4236 +
1691683867.128868-UTR-L-elsbetiae_contig7744:4234..42361691683867.128868-UTR-L-elsbetiae_contig7744:4234..4236Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7744 4235..4236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816859.1563416-CDS-L-elsbetiae_contig7744:1467..16291622816859.1563416-CDS-L-elsbetiae_contig7744:1467..1629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 1468..1629 +
1691683867.088846-CDS-L-elsbetiae_contig7744:1467..16291691683867.088846-CDS-L-elsbetiae_contig7744:1467..1629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 1468..1629 +
1622816859.1678228-CDS-L-elsbetiae_contig7744:2359..24491622816859.1678228-CDS-L-elsbetiae_contig7744:2359..2449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 2360..2449 +
1691683867.0978625-CDS-L-elsbetiae_contig7744:2359..24491691683867.0978625-CDS-L-elsbetiae_contig7744:2359..2449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 2360..2449 +
1622816859.1806676-CDS-L-elsbetiae_contig7744:3191..33231622816859.1806676-CDS-L-elsbetiae_contig7744:3191..3323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 3192..3323 +
1691683867.1068273-CDS-L-elsbetiae_contig7744:3191..33231691683867.1068273-CDS-L-elsbetiae_contig7744:3191..3323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 3192..3323 +
1622816859.1924438-CDS-L-elsbetiae_contig7744:3862..42341622816859.1924438-CDS-L-elsbetiae_contig7744:3862..4234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 3863..4234 +
1691683867.1166139-CDS-L-elsbetiae_contig7744:3862..42341691683867.1166139-CDS-L-elsbetiae_contig7744:3862..4234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7744 3863..4234 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7744.16687.1

>prot_L-elsbetiae_contig7744.16687.1 ID=prot_L-elsbetiae_contig7744.16687.1|Name=mRNA_L-elsbetiae_contig7744.16687.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MSIDGGGMGAPNTVEDDQFAAGPSVDGGSGGNDGWGVETQLARADQEPGG
HKTDIYSEVHRALQMLHEVDSVLEQLSIFWANSEVIFDVLLRKGDLVEKF
VAFANKPRLLQRFRERLADYKRFWEGVQNVCNKYVCGHDKCAGSGGSGFG
GGGGRPEPADGNRNGGGNGNGGAGGGGGDGGVVGGGGAGSRYYDGSFSAE
SHRTDSNTSSGSQMERDGEGAGQPAKHGLGGAGGWATMEMGLDAGSGGGI
R*
back to top

mRNA from alignment at L-elsbetiae_contig7744:1421..4236+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7744.16687.1 ID=mRNA_L-elsbetiae_contig7744.16687.1|Name=mRNA_L-elsbetiae_contig7744.16687.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2816bp|location=Sequence derived from alignment at L-elsbetiae_contig7744:1421..4236+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGGCAGGATGCCGACGTCGATGCCGTTGCCGGCCTCGCCGCTCGGATG
TCCATCGACGGCGGCGGGATGGGTGCGCCCAACACGGTCGAAGACGATCA
GTTTGCGGCCGGGCCCAGCGTGGACGGCGGTAGTGGCGGCAATGACGGGT
GGGGCGTGGAGACGCAGCTGGCTCGTGCGGACCAAGAGCCGGGCGGGCAC
AAAACAGACGTGAGGCGGCGGTTCGTGGATAGCTGAGAGACTGGCACAAG
TGTATAGCTTGGCTTGGAAAGTTATCCTGTGACCATGGGAATCGACCGCG
TCAGTGTTGGATTGGTGCGGACTCATGGAGATGTACTGGATATTTAGAGA
GATCGGAACGGTTTTTTATGTGAAGACACCACACACACAGTCTGGTGTTG
CAAGAGCTGCAATGCAGTATGTTTTCGCTTGCGGATTGTTTTATGCGATT
CGGGTGCGGCAGGTATTTCGCGCGTTTCGTTTCGTTTCGTTTCATGTTTG
TACCTGTCTTTGGGGATGTCCTTGTTCTGCCGCTGTCAGGTTGATATTGT
GCTCCCACGCGCCAATTGCTTGGCTGTTGATGTTCTTGATGATCGCTTTG
CCAATGCCGCCACAGCAATTGCTGCTGCTGCTGCGGCGGCGGCGGCTGCG
GCCGCTGGTGCTGGTGCTGGTGCTGGTCTAGTTCCGGTTGGTGCCGCCCC
AAAAACCGAAAGAGGACACGTTAGCGCTGCAAAACCCTCGGATTGAAGCG
CCCCCTGCTCCGCAAAATTGCTCGCGGGTGTTGCTGCACATCCGGTAGCC
TTGGCTGTGTGCCTTTGTAGAGACAAGCTAGCTCATTCGCACCCAGTTTC
GCCTGCGTCTGCGCCTGTTCGCTCTCCTCGGCTGCCATCCGCCTTGATTT
GCTTGCGTTACTCTGCCCGTCCGTTTTGCCCTTTGGCAGATATACTCGGA
GGTCCACCGCGCACTGCAGATGCTGCACGAAGTTGACAGCGTGTTAGAGC
AGCTCTCGATTTTTTGGGCCAACAGCGAGGTGCGGGCAATCAATCCACCA
CGGGCGTTATTTTTTGCCGGTGTGGGGCGGTGTAGGGGGGGTATTCGCGT
TGCCGTGCTGCTCAACACGGCGGCTAACAACAGCAGGGTTGGTTCTGTTA
TAGAACCTTCGTCTGGTTTCTATTTGACGCCGTGTGCGTGAGCGTTGAGC
GACCGCTTGTGAGGTTGCTGACGAAACGTGCGCTCAGCAGGGGGTCGGGT
GCTTCCATGACACGCTCGAGCTCGGCCAGCGAGAGTTTGTACCGTAGGTG
ACATAAGATAAGACACCCCCTGGACCGAGATTGAAAGCTTGGTTACTCCG
CAACGAATACGATTCTAACCACAAACGCCACAGTTTCGGACAGCTCTCCA
CGAGATCTTTCCAACGCCGCCCTTTTCGGGACTTAACGCTTTGCTTGCTG
TGGAGTACTCGAGCTTTGAAAATCGGTCCAGGGGGTGTCTTATCTTATGC
CACCTACGGTAGATGGTCGCGCTTCCCTCGCACGACCTCCGGGTGATCAT
CCCCCAGCCCTTGTCAGGCTTTTTCGATTTCCTCCCAGCCCGGCATCCCT
ATGATGTACGTACGGTATATACATATGCATGCAGCGCGTTCACCCCTCCT
GCTGCTTGCCACGGGGCTTTCTTTCTCGACATTTATTACGTTTTTTTTTC
TCTCTTTTTTCCTCCCATTATTGGCATATTTGTCGTCTGCCCCGTTGATA
CATGCGGTACCGAGTAAACAGGTGATTTTTGACGTCCTCCTGAGGAAGGG
CGATCTTGTCGAGAAGTTCGTCGCCTTTGCCAACAAGCCGCGCCTCCTTC
AGCGGTTCAGGGAACGACTGGCGGACTACAAGCGCTTTTGGGAAGGGGTG
CAGGTATGTTGTTGTTGTTGTTTCTCACATTCGCTCTCTATTTACATGGC
CCAAACACATCCATGCGGGGGGCTGTGGTCACAAAAACAGGGCACACTCG
ACGCCGCTGAAGCGGGTACACACTCGAAGCGTGTATTCATGCAGGGTTTT
TGGTTGCCGTGCGTGGGGGTCTCGCCGGTGACCAAGCGGGGGGAAGAGGG
TGTGCAGAATCAATCCTGCGTGGCAGTCAAAGCGCGACGTTTGGTGTATT
TGTGTGCAGTGTTGTAAAGTATTTTGATGTCTGTCTACGTATGTATGGAA
GTACATCCGTGCTTTGTGAGGCCACCCGTACCTCTCGGCTTGTGTCTGGT
ATTTAGCGACTAATCCGCGGATGTATCCATGCACTGCTGTTTTCTTTGTG
TGATTTGTGTTTTCGAACGTTCACTGTTCTGATCTCTTTATCCCCCCGCC
CCATACGTGTCGCCCTTGTCTTGCATTATTTTTTTGGCACGTTCGCGGCA
ACGAATTGCCTCTGGCCGGCCGCCGGCTTCCCACCCAATCAGAACGTGTG
CAACAAGTACGTGTGCGGTCATGACAAGTGCGCCGGTAGTGGTGGCAGTG
GTTTTGGTGGTGGGGGCGGCCGGCCAGAGCCAGCCGACGGCAATCGGAAC
GGCGGTGGCAACGGTAACGGCGGTGCCGGCGGCGGCGGCGGCGACGGTGG
TGTTGTTGGTGGTGGCGGCGCCGGCAGCAGGTATTACGACGGGTCTTTCA
GCGCCGAAAGCCACCGCACCGACTCGAACACCTCGTCTGGGAGCCAGATG
GAGAGAGACGGGGAGGGGGCAGGCCAACCTGCGAAGCACGGGCTGGGAGG
TGCCGGGGGCTGGGCGACTATGGAGATGGGTTTGGATGCAGGCAGCGGCG
GCGGCATACGTTGAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7744:1421..4236+

>mRNA_L-elsbetiae_contig7744.16687.1 ID=mRNA_L-elsbetiae_contig7744.16687.1|Name=mRNA_L-elsbetiae_contig7744.16687.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig7744:1421..4236+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCATCGACGGCGGCGGGATGGGTGCGCCCAACACGGTCGAAGACGA
TCAGTTTGCGGCCGGGCCCAGCGTGGACGGCGGTAGTGGCGGCAATGACG
GGTGGGGCGTGGAGACGCAGCTGGCTCGTGCGGACCAAGAGCCGGGCGGG
CACAAAACAGACATGTCCATCGACGGCGGCGGGATGGGTGCGCCCAACAC
GGTCGAAGACGATCAGTTTGCGGCCGGGCCCAGCGTGGACGGCGGTAGTG
GCGGCAATGACGGGTGGGGCGTGGAGACGCAGCTGGCTCGTGCGGACCAA
GAGCCGGGCGGGCACAAAACAGACATATACTCGGAGGTCCACCGCGCACT
GCAGATGCTGCACGAAGTTGACAGCGTGTTAGAGCAGCTCTCGATTTTTT
GGGCCAACAGCGAGATATACTCGGAGGTCCACCGCGCACTGCAGATGCTG
CACGAAGTTGACAGCGTGTTAGAGCAGCTCTCGATTTTTTGGGCCAACAG
CGAGGTGATTTTTGACGTCCTCCTGAGGAAGGGCGATCTTGTCGAGAAGT
TCGTCGCCTTTGCCAACAAGCCGCGCCTCCTTCAGCGGTTCAGGGAACGA
CTGGCGGACTACAAGCGCTTTTGGGAAGGGGTGCAGGTGATTTTTGACGT
CCTCCTGAGGAAGGGCGATCTTGTCGAGAAGTTCGTCGCCTTTGCCAACA
AGCCGCGCCTCCTTCAGCGGTTCAGGGAACGACTGGCGGACTACAAGCGC
TTTTGGGAAGGGGTGCAGAACGTGTGCAACAAGTACGTGTGCGGTCATGA
CAAGTGCGCCGGTAGTGGTGGCAGTGGTTTTGGTGGTGGGGGCGGCCGGC
CAGAGCCAGCCGACGGCAATCGGAACGGCGGTGGCAACGGTAACGGCGGT
GCCGGCGGCGGCGGCGGCGACGGTGGTGTTGTTGGTGGTGGCGGCGCCGG
CAGCAGGTATTACGACGGGTCTTTCAGCGCCGAAAGCCACCGCACCGACT
CGAACACCTCGTCTGGGAGCCAGATGGAGAGAGACGGGGAGGGGGCAGGC
CAACCTGCGAAGCACGGGCTGGGAGGTGCCGGGGGCTGGGCGACTATGGA
GATGGGTTTGGATGCAGGCAGCGGCGGCGGCATACGTTGAAACGTGTGCA
ACAAGTACGTGTGCGGTCATGACAAGTGCGCCGGTAGTGGTGGCAGTGGT
TTTGGTGGTGGGGGCGGCCGGCCAGAGCCAGCCGACGGCAATCGGAACGG
CGGTGGCAACGGTAACGGCGGTGCCGGCGGCGGCGGCGGCGACGGTGGTG
TTGTTGGTGGTGGCGGCGCCGGCAGCAGGTATTACGACGGGTCTTTCAGC
GCCGAAAGCCACCGCACCGACTCGAACACCTCGTCTGGGAGCCAGATGGA
GAGAGACGGGGAGGGGGCAGGCCAACCTGCGAAGCACGGGCTGGGAGGTG
CCGGGGGCTGGGCGACTATGGAGATGGGTTTGGATGCAGGCAGCGGCGGC
GGCATACGTTGA
back to top