mRNA_L-elsbetiae_contig77.16633.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: D7G6E1_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E1_ECTSI) HSP 1 Score: 352 bits (902), Expect = 2.540e-121 Identity = 194/214 (90.65%), Postives = 202/214 (94.39%), Query Frame = 1 Query: 1 FPLCHADGHMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFMVRE 642 F +DGHMLYMGKDKYENEDLIRYG PEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRK+V+VVYTRWQNLEKK SYEAGQVGYKDES+VFKCRVEK NAIVNALNRTKREEHP+LA LQEERAKE+RREQKALRKKK XXXXXXXXXXXX LRSYDTLFEESKMASNADVAA+EDASASIAFEDDFMVR+ Sbjct: 3 FYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVRQ 216
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A835Z4I1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I1_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.550e-93 Identity = 147/210 (70.00%), Postives = 169/210 (80.48%), Query Frame = 1 Query: 16 ADGHMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVA----ASEDASASIAFEDDFM 633 + GH LYMGKDKYENEDLIRYG+PEDVWFHVDNLSSAHVYLRMN+GEKLKE+ P +++ECC LVKANSIEGCK+KDV VVYTRW NL K S EAGQVG+KDESKV K RVEK NAIVNALNR+K E PDL ALQEERA E RREQKA+RK++E KR+RSYD+LF+E KMA + +V+ ASED S+++AFEDDFM Sbjct: 7 SSGHTLYMGKDKYENEDLIRYGLPEDVWFHVDNLSSAHVYLRMNKGEKLKEVLPEVIMECCQLVKANSIEGCKKKDVEVVYTRWMNLRKSNSMEAGQVGFKDESKVHKVRVEKNNAIVNALNRSKTEASPDLQALQEERAAEIRREQKAVRKQQEQAEKIARRQAEEDKRMRSYDSLFDEGKMAGSTNVSNPYGASEDQSSAVAFEDDFM 216
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6H5KW36_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW36_9PHAE) HSP 1 Score: 263 bits (671), Expect = 5.290e-87 Identity = 153/164 (93.29%), Postives = 159/164 (96.95%), Query Frame = 1 Query: 142 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 MNRGEKLKELDPALLVECCTLVKANSIEGCKRK+V+VVYTRWQNLEKK SYEAGQVGYKDES+VFKCRVEK NAIVNALNRTKREEHP+LA LQEERAKE+RREQKALRKKKE XXXXXXXXXXXX RLRSYDTLFEESKMASNADVAA+EDASASIAFEDDFM Sbjct: 1 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKEXXXXXXXXXXXXXXRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 164
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A4D9D3G1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3G1_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.190e-60 Identity = 112/168 (66.67%), Postives = 134/168 (79.76%), Query Frame = 1 Query: 37 MGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYD 540 MGKDKYENE+LIR+G+PEDVWFHVD LSSAHVYLR G+KL ++ LL+EC +LVKANSIEGCK K+V VVYTRW+NL+K S EAGQ+G+ D SKV +V+K N+IVNALN+TK E PDL A QE RA EYR QKA ++ +E XXXXXXXXXXX +LRSY+ Sbjct: 1 MGKDKYENEELIRFGLPEDVWFHVDELSSAHVYLRQKPGQKLDDISSDLLLECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERFPDLQAEQEARAVEYRAAQKASKRDQEXXXXXXXXXXXXEAKLRSYE 168
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6U6DJ37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DJ37_9STRA) HSP 1 Score: 193 bits (490), Expect = 8.430e-59 Identity = 115/202 (56.93%), Postives = 144/202 (71.29%), Query Frame = 1 Query: 28 MLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 MLYMGKDKYENEDLI++G PEDVWFHVD+LSSAHVYLRM G L ++ P ++EC LVKANSI+GCK K V+VVYTRW+NL+K GQVG+ V + VEK N IVNALN+TK E HPDL Q++R +E + E+KA XXXXXXXXXXXXK SY+ + ++ M SNA+ A+ DA+A+ +E+DF Sbjct: 13 MLYMGKDKYENEDLIKFGQPEDVWFHVDDLSSAHVYLRMKPGMTLSDIPPDAILECAALVKANSIQGCKMKSVYVVYTRWKNLKKTSQMVDGQVGFHRPENVKRMEVEKHNPIVNALNKTKEERHPDLYKEQQDRLREIQEEKKANXXXXXXXXXXXXXXXXXXKERLSYNRIMKDDNMTSNAERTATADATAAEEYEEDFF 214
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: B8C9M3_THAPS (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M3_THAPS) HSP 1 Score: 191 bits (484), Expect = 8.480e-58 Identity = 105/210 (50.00%), Postives = 134/210 (63.81%), Query Frame = 1 Query: 25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPS-------YEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 + +YMGKDKYENEDLI+YG PED WFHVD+LSSAHVYLR+ G L ++ L +CC LVKANSI+GCK+ V+VVYTRW+NL+K S GQVG+ V + +EK N IVN LN+TK E+HP+LA Q++R KE + E K RK + K RSYD + E M SNA+ A+ D++A+ FEDDFM Sbjct: 12 YTIYMGKDKYENEDLIKYGHPEDCWFHVDDLSSAHVYLRLKPGMTLDDIPEDCLTDCCALVKANSIQGCKKSSVYVVYTRWKNLKKASSTCQDTSDMVDGQVGFHRPDNVRRTNIEKNNPIVNQLNKTKEEKHPNLAKQQQDRMKEIQTELKEKRKADDKAKRLEELERARIKEERSYDRIMGEHNMTSNAERNATADSTAAEEFEDDFM 221
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: K0TEU7_THAOC (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEU7_THAOC) HSP 1 Score: 187 bits (475), Expect = 1.570e-56 Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 + +YMGKDK+ENE LI+YG+PEDVWFHVD+LSSAHVYLR+ G+ L ++ L++CC+L KANSI+GCK+ V++VYTRW+NL+K GQVGY + V + + EK N +V L +TK+E PDLA Q R +E + +KA + + XXXXXX K RSY+ +F + KM SNAD+ A+ D SA++ +EDDFM Sbjct: 12 YTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMREIQELKKAHMRAEAKAKKLXXXXXXRLKEERSYERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: W7TY76_9STRA (Lycopene beta cyclase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY76_9STRA) HSP 1 Score: 200 bits (508), Expect = 4.150e-56 Identity = 118/190 (62.11%), Postives = 147/190 (77.37%), Query Frame = 1 Query: 43 KDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASI 612 KDKYENE+LIR+G+PEDVWFHVD+LSSAHVYLR G+KL ++ LL EC +LVKANSIEGCK K+V VVYTRW+NL+K S EAGQ+G+ D SKV +V+K N+IVNALN+TK E +PDL A QE RA EYR QKA ++ +E XXXXXXXXXXXX +LRSY++L + M SN ++ D SA++ Sbjct: 68 KDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKASKRDQEKXXXXXXXXXXXXAKLRSYESLMNDGGMESNKKWGSTADVSAAL 257
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A7S3L4J2_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4J2_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.200e-55 Identity = 110/197 (55.84%), Postives = 145/197 (73.60%), Query Frame = 1 Query: 43 KDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 +DKYENEDLIRYG+PEDVWFHVD+LSSAHVYLRM G L ++ LL++C +LVKANSI+GCK+ V+VVYTRW+NL+K S GQVG+ V + VEK IV A+ +TK+E++PDLA LQ++R++E + E+K K+ XXXXXXXXXXXX +SYD + +E M +NA A+ DA+A+ +EDDFM Sbjct: 36 QDKYENEDLIRYGLPEDVWFHVDDLSSAHVYLRMKPGMTLDDISEDLLLDCASLVKANSIQGCKKSSVYVVYTRWKNLKKTNSMVDGQVGFHRPDNVRRMEVEKNGPIVRAIEKTKKEDYPDLAQLQQDRSREIQMEKKEEYKRXXXXXXXXXXXXXXXXEAKSYDRIMKEENMVTNATRQATVDATAAEEYEDDFM 232
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6B2LIL4_9EUKA (NFACT-R_1 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LIL4_9EUKA) HSP 1 Score: 183 bits (465), Expect = 4.240e-55 Identity = 99/204 (48.53%), Postives = 136/204 (66.67%), Query Frame = 1 Query: 25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRV-EKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633 + +YMGKDK+ENE+LI+YG+PED+WFHVDNLSSAHVYLR+ G+ + ++ +L +CC LVK NSI+GCK +V +VYT W NL+K S E GQVG+ ++ V K +V +K NAIVN L +TK+E HPDL A+QE+R E RR++K +++ XX + +R+Y E KM SN DV + +EDDFM Sbjct: 13 YTIYMGKDKFENEELIKYGLPEDIWFHVDNLSSAHVYLRLPPGKTITDIPGEVLEDCCQLVKQNSIQGCKIDNVPIVYTPWSNLKKTQSMEVGQVGFHNQKLVLKYKVAKKVNAIVNRLEKTKKELHPDLKAMQEQRLNEIRRDEKNEKERLXXXXMDKIAENKREEDIRTYKDFMEPEKMISNYDVQDN--------YEDDFM 208 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig77.16633.1 >prot_L-elsbetiae_contig77.16633.1 ID=prot_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp MLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPback to top mRNA from alignment at L-elsbetiae_contig77:24289..26612- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig77.16633.1 ID=mRNA_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2324bp|location=Sequence derived from alignment at L-elsbetiae_contig77:24289..26612- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig77:24289..26612- >mRNA_L-elsbetiae_contig77.16633.1 ID=mRNA_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig77:24289..26612- (Laminarionema elsbetiae ELsaHSoW15)back to top |