mRNA_L-elsbetiae_contig7551.16451.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7551.16451.1
Unique NamemRNA_L-elsbetiae_contig7551.16451.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.840e-125
Identity = 193/284 (67.96%), Postives = 219/284 (77.11%), Query Frame = 1 
Query:    7 QRAGFRGGSFGVARGSSQ-----EMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCG-FAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGVTRGAAERLGR 840
            +R GFRGG FGV    SQ     +  EG+L ATYSALA LVAL+VDL   VD  A+V AL SLQ+EDGSF++S SDSTCD+RFTYCACAVST+LG+WSGVD+RKAA Y+ERCY              DFDGG+G+APGREACAGP YCAVASL+L+G L+ L   RRQG+LEWCVNRQ     G GFQGRPNK EDSCCSFWVGATLALL GL LVD  RARQFH+SC+N+ CG FAK PG P D+LHSFYS++WLSL+GEAGVQE MD ALGVTR AA RL R
Sbjct:   75 RRRGFRGGPFGVVAEPSQRNGEDDAGEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQREDGSFKASASDSTCDVRFTYCACAVSTILGNWSGVDRRKAAEYVERCY--------------DFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQ-----GVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDDGRARQFHVSCQNRICGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQE-MDAALGVTRRAAGRLKR 338
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A6H5KFN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN4_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 5.620e-101
Identity = 188/361 (52.08%), Postives = 211/361 (58.45%), Query Frame = 1 
Query:    7 QRAGFRGGSFGVARGSSQ-----EMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREAC-----AGPMYCAVASLELMGTLDALSASRRQGLLEWCVNRQ--------------------------------------------------------------------VGAGG----GSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCG-FAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGVTRGAAERLGR 840
            +R GFRGG FG+    SQ     + DEG+L ATYSALA LVAL+VDL   VD +A+V AL SLQQEDGSF++S SDSTCD+RFTYCACAVST+LG+WSGVD+RKAA Y+ERCY                         R AC     AGP YCAVASL L+G L+ L   RRQGLLEWCVNRQ                                                                     G+ G    G GFQGRPNK EDSCCSFWVGATLALL GL LVD+ARARQFH+SC N  CG FAK PG P D+LHSFYS++WLSL+GEAGVQE MD ALGVTR AA RL R
Sbjct:  109 RRRGFRGGPFGMVAEPSQGNGKDDADEGNLAATYSALATLVALDVDLTTGVDSNAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAEYVERCY-------------------------RHACPISHPAGPTYCAVASLNLLGVLEKLPIPRRQGLLEWCVNRQNPTRVMADSSGEFPATNLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPLSASIALRFFGSYGSLLKGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCHNPICGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQE-MDTALGVTRRAAGRLRR 443
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A7S2XYG8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYG8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.840e-62
Identity = 113/220 (51.36%), Postives = 138/220 (62.73%), Query Frame = 1 
Query:  157 LVLALRSLQQEDGSFRSSFSD-STCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDAL-SASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGV 810
            L+LALR LQQ DGSF S   D S CDLRF YCACA+S++L +W GVD+    AY   C              Q +DG  GL PG+E+  G  YCAVASL LMG LD+      R  L++WC++RQVG     GFQGRPNK  D+C SFWVGATL LLG   LV+      F  +C+    GF+KIP AP D+LHSFYS+ WLSL+G AG Q  +D +LG+
Sbjct:   19 LILALRQLQQPDGSFSSLPGDGSECDLRFAYCACAISSMLQNWGGVDRPSLLAYFRAC--------------QSYDGAFGLIPGQESHGGSTYCAVASLYLMGELDSFFDGQSRLRLVKWCLDRQVG-----GFQGRPNKQADTCYSFWVGATLKLLGEFDLVEPGPVTAFVATCQGWG-GFSKIPDAPPDILHSFYSVCWLSLTGFAGTQP-LDCSLGI 217
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A0G4J204_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J204_PLABS)

HSP 1 Score: 201 bits (512), Expect = 5.530e-59
Identity = 117/273 (42.86%), Postives = 155/273 (56.78%), Query Frame = 1 
Query:   16 GFRGGSF-GVARGSSQEM-----DEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSG-EAGVQEDMDVALGVT 813
            GFRGGS+ G +   S  M     DEGHL  TY+AL  L ALE D A   D S +V ++ +LQ+ DGSF  + + +  D RFT+CACAV+ + GDW G+D+  A  Y+ +C                FDG  G APG+E   G  Y AVASL LMG LD LS  +R+  + WC+ +Q     G G+ GR NK  DSC S+W+GA L LLG      K+  R F++SC+    GF K+PG   D++HS    A LS+ G ++ V    DVA+GVT
Sbjct:  106 GFRGGSYLGASYDPSGTMPVHRHDEGHLAMTYTALCTLFALEYDFAG-FDWSGIVRSMGALQRPDGSFAPTIASTDIDSRFTFCACAVAWMAGDWGGIDRDLATEYLLKCV--------------SFDGAFGFAPGQEGHGGSTYIAVASLFLMGRLDRLSRHQRRRTIAWCIRKQ-----GDGYHGRTNKPADSCYSYWLGAALRLLGAEQYTAKSSNRDFNLSCKTVCGGFGKLPGCDPDLMHSMMGTAGLSIIGMDSSVLLPFDVAIGVT 358
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A2N9JC29_FAGSY (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9JC29_FAGSY)

HSP 1 Score: 198 bits (504), Expect = 1.090e-57
Identity = 116/278 (41.73%), Postives = 159/278 (57.19%), Query Frame = 1 
Query:   16 GFRGGSFGVARGSSQEMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTL--DALSASRRQG------LLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGVTRGAA 825
            G R   F          +  HL +TYSAL+ L  +  + + ++D   ++ ++R+LQQ DGSF    + +  DLRFTYCA A+  +L DW G+DK KA  YI  C   YT I Q   C Q +DGG G+ PG E+  G +YCAVASL LMG +  D LS S          LL W + RQ   GG   FQGRPNK  D+C +FW+GATL +LGG   +D+     F ++C+ +  GF+K PG  +D+ HS+Y +   SL GE+G+   + V LG+T  AA
Sbjct:  106 GSRTSQFPPESSGDLSHNSSHLASTYSALSILKIVGYNFS-NIDSERILTSMRNLQQPDGSFMPLHTGAETDLRFTYCAAAICFMLEDWRGMDKEKAKEYILNCQCTYTYI-QLMPCFQSYDGGFGIKPGSESHGGGIYCAVASLRLMGFIGVDLLSNSATPSIINVPLLLSWILQRQATDGG---FQGRPNKDSDTCYAFWIGATLRILGGHKFIDEKALHGFLLTCQYEYGGFSKFPGEIADLYHSYYGITAFSLLGESGMNP-LCVELGITDRAA 377
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A6B2L8R2_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8R2_9EUKA)

HSP 1 Score: 194 bits (493), Expect = 1.700e-56
Identity = 118/280 (42.14%), Postives = 157/280 (56.07%), Query Frame = 1 
Query:   16 GFRGGSFGVA-------RGSSQEMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGVTRGAAERL 834
            G+RGG+F  A         +S   D+GH+  TY ALA L+ L  D +  VD  A++ AL  LQQ  GSF     +S CD+R+ YCA AVS +L DWSG DK KA  YI                +Q +D G+  AP  EA  G  YCA+ASL LMG LD L    +  L +W + RQ       GF GRPNK +D+C SFWVGA+L +LG  HLVD+   R++ +SC+ K  GFAK     +D LHS++SL  L+   E G+ E +   LG ++ + +RL
Sbjct:   73 GWRGGTFVGAPFDCSGKAATSYPYDQGHIAMTYVALALLLILGDDFSR-VDKKAIIEALPYLQQPSGSFSPVADESECDMRYVYCAAAVSYMLNDWSGFDKDKATQYI--------------LSSQSYDYGIAQAPNEEAHGGSTYCALASLALMGRLDELP--HKDKLTKWLIFRQE-----QGFNGRPNKIQDTCYSFWVGASLKILGAYHLVDEQNTRKYTLSCQKKNGGFAKWSSQSADPLHSYFSLCGLTFINEPGLAEVLP-ELGFSKKSHDRL 329
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A0D3BQK0_BRAOL (Geranylgeranyl transferase type-1 subunit beta n=11 Tax=Brassiceae TaxID=981071 RepID=A0A0D3BQK0_BRAOL)

HSP 1 Score: 194 bits (493), Expect = 4.990e-56
Identity = 110/263 (41.83%), Postives = 147/263 (55.89%), Query Frame = 1 
Query:   16 GFRGGSFGVARGSSQEMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTL--DALSASRRQGLLE------WCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGV 780
            G R   F +        +  HL +TY ALA L  +  DL+  +D  +L+L++++LQQ+DGSF  + +    DLRF YCA A+S +LGDWSG+DK KA  YI  C              Q +DGG GL PG E+  G  YCA+ASL LMG +  D LS      +L+      W + RQ   GG   FQGR NK  D+C +FW+GA L L+GG   +DK   RQF +SC++K  GF+K PGA  D+ HS+Y     S   E G+
Sbjct:  121 GSRSSQFPIDENGDLTHNNSHLASTYCALAILKVIGHDLST-IDSESLLLSMKNLQQDDGSFMPTHTGGETDLRFVYCAAAISDMLGDWSGMDKEKAKNYILNC--------------QSYDGGFGLIPGSESHGGGTYCAIASLRLMGFIGADLLSNDSSSSILDPSLLLNWSLQRQASDGG---FQGRTNKRSDTCYAFWIGAVLKLIGGDAFIDKIALRQFLLSCQSKYGGFSKYPGALPDLYHSYYGYTAFSFLEEPGL 365
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A7I8L8W8_SPIIN (Geranylgeranyl transferase type-1 subunit beta n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L8W8_SPIIN)

HSP 1 Score: 193 bits (490), Expect = 5.610e-56
Identity = 111/255 (43.53%), Postives = 151/255 (59.22%), Query Frame = 1 
Query:   76 HLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQG--------LLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPS-DVLHSFYSLAWLSLSGEAGVQEDMDVALGVT 813
            HL +TY ALA L  +  D + ++D +++ L++++LQQ DGSF      +  DLRF YCA A+S++L +W G+DK KA  YI +C              Q +DGG GL PG E+  G  YCAVA+L+LMG + A   SR  G        LLEW + RQ   GG   FQGRPNKA D+C +FWV   L +LG    +DK   R F +SC+++  GF K PG+P  D+ HS+Y LA  SL GE G+ + + V LG+T
Sbjct:  105 HLASTYCALAILKIIGYDFS-NLDSNSISLSMKNLQQPDGSFIPIHFGAERDLRFVYCAAAISSMLNNWCGMDKEKATDYIIKC--------------QSYDGGFGLVPGSESHGGATYCAVAALQLMGYIKANYISRSTGSSVVNVSALLEWALQRQAADGG---FQGRPNKASDTCYAFWVVGVLRILGADQFLDKDALRSFLLSCQSEYGGFTKFPGSPPPDLYHSYYGLAAFSLLGEPGLAQ-LQVELGIT 340
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BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: V4P070_EUTSA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4P070_EUTSA)

HSP 1 Score: 192 bits (487), Expect = 4.880e-55
Identity = 109/263 (41.44%), Postives = 144/263 (54.75%), Query Frame = 1 
Query:   16 GFRGGSFGVARGSSQEMDEGHLPATYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQG--------LLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGV 780
            G R   F V        +  HL +TY ALA L  +  DL+  +D  +L+L++++LQQ+DGSF    +    DLRF YCA A+S +LG+WSG+D   A  YI  C              Q +DGG GL PG E+  G  YCA+ASL LMG +     S   G        LL+WC+ RQ   GG   FQGR NK  D+C +FW+GA L LLG    +DK   RQF ++C++K  GF+K PGA  D+ HS+Y     SL  E G+
Sbjct:  130 GSRSSQFPVDENGDLTHNNSHLASTYCALAILKVIGYDLST-IDSESLLLSMKNLQQDDGSFMPIHTGGETDLRFVYCAAAISDMLGNWSGMDTEMAKNYILNC--------------QSYDGGFGLIPGSESHGGATYCAIASLRLMGFIGDDLLSNDSGSSVIDSSLLLDWCLQRQASDGG---FQGRTNKRSDTCYAFWIGAVLKLLGADAFIDKIALRQFLLTCQSKYGGFSKFPGALPDLYHSYYGYTAFSLLEEPGL 374
[Close]
BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Match: A0A7S2TT83_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TT83_9EUKA)

HSP 1 Score: 186 bits (472), Expect = 9.780e-55
Identity = 112/246 (45.53%), Postives = 142/246 (57.72%), Query Frame = 1 
Query:   88 TYSALAALVALEVDLAADVDGSALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKRKAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASLELMGTLDALSASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWVGATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLAWLSLSGEAGVQEDMDVALGVTRGAA 825
            TYSAL AL  L  DL   VD  A+V +L+ LQ+E+G FR + S+   D+RF YCAC +S +LGDWSGV+K  A  YI                +Q FDGG+GL  G E   G  YCAVASL LMG LDAL      GL+ WCV  Q     G GF GRPNK  DSC SFW+GAT+ +LG   L      R F++ C+ K  GF K P    D+LHS++ +  LS+ G  G++  +D   G+T+ AA
Sbjct:    2 TYSALCALRILGDDLK-KVDKKAIVSSLKLLQRENGCFRCATSEED-DMRFMYCACVISDMLGDWSGVNKEAAVKYIVE--------------SQAFDGGIGLRIGAEGHGGTTYCAVASLVLMGRLDALKDY--DGLVRWCVYGQ-----GQGFVGRPNKPPDSCYSFWIGATMMMLGVYDLTAANDNRHFNLRCQTKWGGFGKYPDVHPDILHSYFGICGLSMMGMDGLRP-IDPVWGITQRAA 223
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7551.16451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q8_ECTSI1.840e-12567.96Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A6H5KFN4_9PHAE5.620e-10152.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XYG8_9STRA3.840e-6251.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4J204_PLABS5.530e-5942.86Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A2N9JC29_FAGSY1.090e-5741.73Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6B2L8R2_9EUKA1.700e-5642.14Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A0D3BQK0_BRAOL4.990e-5641.83Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A7I8L8W8_SPIIN5.610e-5643.53Geranylgeranyl transferase type-1 subunit beta n=2... [more]
V4P070_EUTSA4.880e-5541.44Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A7S2TT83_9EUKA9.780e-5545.53Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7551contigL-elsbetiae_contig7551:2031..4326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.8
Seed ortholog evalue3.7e-101
Seed eggNOG ortholog2880.D7G4Q8
Preferred namePGGT1B
KEGG koko:K11713
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004659,GO:0004661,GO:0004662,GO:0004663,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005953,GO:0005968,GO:0006464,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007275,GO:0007507,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0008318,GO:0009414,GO:0009415,GO:0009555,GO:0009628,GO:0009719,GO:0009725,GO:0009733,GO:0009737,GO:0009787,GO:0009788,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010556,GO:0010558,GO:0010605,GO:0010646,GO:0010648,GO:0016740,GO:0016765,GO:0018342,GO:0018344,GO:0019222,GO:0019538,GO:0019725,GO:0022622,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030010,GO:0032501,GO:0032502,GO:0032507,GO:0032991,GO:0033036,GO:0033993,GO:0034097,GO:0034613,GO:0035050,GO:0035295,GO:0035556,GO:0036211,GO:0042127,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0045787,GO:0046872,GO:0046914,GO:0048229,GO:0048364,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0051716,GO:0051726,GO:0051769,GO:0051771,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060429,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0072359,GO:0072503,GO:0072507,GO:0072657,GO:0072658,GO:0072659,GO:0072660,GO:0097305,GO:0097354,GO:0098771,GO:0099402,GO:0140096,GO:1901419,GO:1901420,GO:1901564,GO:1901700,GO:1902494,GO:1905957,GO:1905958,GO:1990234,GO:1990778
EggNOG free text desc.Prenyltransferase
EggNOG OGsCOG5029@1,KOG0367@2759
EC2.5.1.59
COG Functional cat.O
BiGG ReactioniND750.YGL155W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01006
Ec32 ortholog descriptionTerpenoid cyclases/protein prenyltransferase alpha-alpha toroid
Ec32 orthologEc-20_000720.1
Exons6
Model size873
Cds size873
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7551.16451.1prot_L-elsbetiae_contig7551.16451.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7551 2031..4326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816839.3909283-CDS-L-elsbetiae_contig7551:2030..22271622816839.3909283-CDS-L-elsbetiae_contig7551:2030..2227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2031..2227 +
1691683852.7896101-CDS-L-elsbetiae_contig7551:2030..22271691683852.7896101-CDS-L-elsbetiae_contig7551:2030..2227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2031..2227 +
1622816839.4017837-CDS-L-elsbetiae_contig7551:2589..27221622816839.4017837-CDS-L-elsbetiae_contig7551:2589..2722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2590..2722 +
1691683852.8155913-CDS-L-elsbetiae_contig7551:2589..27221691683852.8155913-CDS-L-elsbetiae_contig7551:2589..2722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2590..2722 +
1622816839.4152575-CDS-L-elsbetiae_contig7551:2922..29601622816839.4152575-CDS-L-elsbetiae_contig7551:2922..2960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2923..2960 +
1691683852.833565-CDS-L-elsbetiae_contig7551:2922..29601691683852.833565-CDS-L-elsbetiae_contig7551:2922..2960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 2923..2960 +
1622816839.425989-CDS-L-elsbetiae_contig7551:3024..31961622816839.425989-CDS-L-elsbetiae_contig7551:3024..3196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 3025..3196 +
1691683852.8570647-CDS-L-elsbetiae_contig7551:3024..31961691683852.8570647-CDS-L-elsbetiae_contig7551:3024..3196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 3025..3196 +
1622816839.4362485-CDS-L-elsbetiae_contig7551:3600..37481622816839.4362485-CDS-L-elsbetiae_contig7551:3600..3748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 3601..3748 +
1691683852.8720875-CDS-L-elsbetiae_contig7551:3600..37481691683852.8720875-CDS-L-elsbetiae_contig7551:3600..3748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 3601..3748 +
1622816839.4508042-CDS-L-elsbetiae_contig7551:4141..43261622816839.4508042-CDS-L-elsbetiae_contig7551:4141..4326Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 4142..4326 +
1691683852.8814769-CDS-L-elsbetiae_contig7551:4141..43261691683852.8814769-CDS-L-elsbetiae_contig7551:4141..4326Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7551 4142..4326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7551.16451.1

>prot_L-elsbetiae_contig7551.16451.1 ID=prot_L-elsbetiae_contig7551.16451.1|Name=mRNA_L-elsbetiae_contig7551.16451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp
NRQRAGFRGGSFGVARGSSQEMDEGHLPATYSALAALVALEVDLAADVDG
SALVLALRSLQQEDGSFRSSFSDSTCDLRFTYCACAVSTLLGDWSGVDKR
KAAAYIERCYYVYTTILQCFFCAQDFDGGVGLAPGREACAGPMYCAVASL
ELMGTLDALSASRRQGLLEWCVNRQVGAGGGSGFQGRPNKAEDSCCSFWV
GATLALLGGLHLVDKARARQFHISCENKTCGFAKIPGAPSDVLHSFYSLA
WLSLSGEAGVQEDMDVALGVTRGAAERLGRHRMRWKEHAP*
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mRNA from alignment at L-elsbetiae_contig7551:2031..4326+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7551.16451.1 ID=mRNA_L-elsbetiae_contig7551.16451.1|Name=mRNA_L-elsbetiae_contig7551.16451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2296bp|location=Sequence derived from alignment at L-elsbetiae_contig7551:2031..4326+ (Laminarionema elsbetiae ELsaHSoW15)
AACAGGCAACGAGCTGGTTTTCGTGGTGGCTCGTTCGGCGTGGCGCGAGG
TTCTTCGCAAGAAATGGACGAAGGCCACCTCCCTGCTACCTACTCTGCGC
TGGCCGCACTAGTGGCGTTGGAAGTCGACCTGGCTGCAGATGTCGACGGC
AGTGCCCTTGTGCTGGCACTAAGATCACTGCAGCAGGAAGATGGAAGGTG
TGGAAAGGTGGAGACGTTGCACACGAAAGGATTTGTGTGAGAGGGGACCC
CCGTCTTGAGACAGGCTGGGGCTTTTCTTGCTCTCCAAACTTACGCGGTC
AGAGCTGTCGGGGATTTCACGGGAGGCCTCGCCTTCTGCATAGGTATATA
CAGCGGGGCGGTGTAGCGTGTACTGCAACACCGCCTTGTGAAAGTAGTGG
GTAATCGATTGCACCGCCGAGGGCTCCATGGAATTCGGCACCGGCCTGAA
GTAGCTGCTCCATCGAGCCCCTTTTCAGTTGCACCGACAGTCAAAACCAG
CGCTTTTACCCGGGTGCACCTGGCTGCTCTTGTTTACCGTGCACGTCGAT
CTTTATCAGCTTCAGGTCATCGTTTAGCGATTCAACATGCGACCTCCGTT
TTACCTACTGCGCGTGTGCCGTATCAACCCTGCTCGGCGACTGGAGTGGA
GTGGACAAAAGAAAGGCCGCCGCGTACATCGAGCGTTGTTATGTGCGTGA
GCATGCGCCGGTAGTTGGCAGATATTGTAGAATCGACTGGCCTTCATATG
CTCGGCGCACAAATGCCGGCGTTCATCTTTTACGCGTAGGAGATGCTTGG
GCGTGCTGCCGTTGTGTGGGGGGGACACCCGAGAAATACTTATATATCCA
TAACACCCTGTCCCGACATTTTCATTGTCGTTAAGCTGCGAGTATGTGTA
CACCACGATATTGCAGTGCTTCTTTTGTGCGTCGTCCGCTTTGCATCTTC
CGCTTTGAACCGCTTTACACCACCCCGCGCTGACTTCCGCTAAGCCAGGA
TTTTGACGGGGGCGTGGGATTGGCACCGGGGCGTGAGGCGTGTGCGGGCC
CGATGTACTGCGCGGTTGCCTCGTTGGAGCTGATGGGGACCCTCGATGCG
TTGTCTGCGTCGCGCCGACAAGGACTGTTGGAGTGGTGCGTTAACCGTCA
GGTAGGCGCGGGTGGTGTAGAGCCACGTTGTTGCAGCGCTACCAGGTAAC
GTCGCGTTTAGACGTACAGAGGCGCGACCGGTCGTATCTGTTTATGTTCG
TTTCACCCGGTACAACAGTTGGTACTTCGAAGTGCTTGCTCCGTATGTGT
TTGAGCCACTATCGTTTTGTGTACCGCGTATGGGTGCCGACACCTGACTC
CGCGCGTGTGTTGCGTTCGCGTTGCCTTTTCCATACCCCACGTAAGACTA
CGGAACCGGGTCCGTGGGATCTACTATAGTTGTTGTTGTCGTTGTTTCTT
CACATTAGCTCATATAGTCGATATATATACGAGAAGTCGACTACGAGCTC
ACTCGACTTCCACGCACAACACCCTGTTAAACTTCTCCCCATAAACATGC
ACGTCGATTTTATTATCTAGGGTAGCGGGTTCCAGGGTCGCCCGAACAAG
GCCGAAGACAGCTGCTGCTCTTTTTGGGTTGGAGCTACACTAGCTCTCTT
GGGGGGGCTGCACCTTGTCGACAAGGCCAGAGCCCGGCAATTCCACATCT
CCTGTGAAAACAAGACATGTGGTGAGTGTAGAGCTACGCGTTTGGTAGAA
CTACTTGCACCACCGTCAGGAGCTGTTGAGAGCTCTTGCCCCTCTCGGTT
GGTTAATTTACTACCGCGTTTCTCTTGACCCTTGCACCACGCACAGGTCA
TGCTGCGCGCGGTTGGGGATATTCGGGGATTAGCTGGCCATATGTACCGA
GTTGTACCCAGCTTTTCTATGCGGCCGAGGGACCGACCCCTCCGCTGCAC
TTCCCCTTCGGGTCCTTGCCCTTCTGCTTTCAACACGCCAAGCCGCGAAT
GGGTCGTCCATACGTATACATATATTTTGCGAGCACCTGCACGTGTACCC
TGATATTTGCGGATATTTACTGACTGGCCCTCCTCCCTCCGTCCTTGTTT
TGCGTTGCAAGGTGGGTTTGCCAAGATTCCTGGCGCCCCGTCTGATGTGC
TTCACTCGTTTTACTCCCTTGCATGGCTTTCTCTGTCGGGGGAGGCTGGT
GTCCAAGAAGATATGGACGTTGCTCTGGGCGTCACCAGAGGGGCGGCTGA
ACGGTTGGGAAGACATCGTATGCGGTGGAAGGAGCATGCGCCTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7551:2031..4326+

>mRNA_L-elsbetiae_contig7551.16451.1 ID=mRNA_L-elsbetiae_contig7551.16451.1|Name=mRNA_L-elsbetiae_contig7551.16451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1746bp|location=Sequence derived from alignment at L-elsbetiae_contig7551:2031..4326+ (Laminarionema elsbetiae ELsaHSoW15)
AACAGGCAACGAGCTGGTTTTCGTGGTGGCTCGTTCGGCGTGGCGCGAGG
TTCTTCGCAAGAAATGGACGAAGGCCACCTCCCTGCTACCTACTCTGCGC
TGGCCGCACTAGTGGCGTTGGAAGTCGACCTGGCTGCAGATGTCGACGGC
AGTGCCCTTGTGCTGGCACTAAGATCACTGCAGCAGGAAGATGGAAGAAC
AGGCAACGAGCTGGTTTTCGTGGTGGCTCGTTCGGCGTGGCGCGAGGTTC
TTCGCAAGAAATGGACGAAGGCCACCTCCCTGCTACCTACTCTGCGCTGG
CCGCACTAGTGGCGTTGGAAGTCGACCTGGCTGCAGATGTCGACGGCAGT
GCCCTTGTGCTGGCACTAAGATCACTGCAGCAGGAAGATGGAAGCTTCAG
GTCATCGTTTAGCGATTCAACATGCGACCTCCGTTTTACCTACTGCGCGT
GTGCCGTATCAACCCTGCTCGGCGACTGGAGTGGAGTGGACAAAAGAAAG
GCCGCCGCGTACATCGAGCGTTGTTATCTTCAGGTCATCGTTTAGCGATT
CAACATGCGACCTCCGTTTTACCTACTGCGCGTGTGCCGTATCAACCCTG
CTCGGCGACTGGAGTGGAGTGGACAAAAGAAAGGCCGCCGCGTACATCGA
GCGTTGTTATTATGTGTACACCACGATATTGCAGTGCTTCTTTTGTGCTA
TGTGTACACCACGATATTGCAGTGCTTCTTTTGTGCCCAGGATTTTGACG
GGGGCGTGGGATTGGCACCGGGGCGTGAGGCGTGTGCGGGCCCGATGTAC
TGCGCGGTTGCCTCGTTGGAGCTGATGGGGACCCTCGATGCGTTGTCTGC
GTCGCGCCGACAAGGACTGTTGGAGTGGTGCGTTAACCGTCAGGTAGGCG
CGGGTGGTCCAGGATTTTGACGGGGGCGTGGGATTGGCACCGGGGCGTGA
GGCGTGTGCGGGCCCGATGTACTGCGCGGTTGCCTCGTTGGAGCTGATGG
GGACCCTCGATGCGTTGTCTGCGTCGCGCCGACAAGGACTGTTGGAGTGG
TGCGTTAACCGTCAGGTAGGCGCGGGTGGTGGTAGCGGGTTCCAGGGTCG
CCCGAACAAGGCCGAAGACAGCTGCTGCTCTTTTTGGGTTGGAGCTACAC
TAGCTCTCTTGGGGGGGCTGCACCTTGTCGACAAGGCCAGAGCCCGGCAA
TTCCACATCTCCTGTGAAAACAAGACATGGTAGCGGGTTCCAGGGTCGCC
CGAACAAGGCCGAAGACAGCTGCTGCTCTTTTTGGGTTGGAGCTACACTA
GCTCTCTTGGGGGGGCTGCACCTTGTCGACAAGGCCAGAGCCCGGCAATT
CCACATCTCCTGTGAAAACAAGACATGTGGGTTTGCCAAGATTCCTGGCG
CCCCGTCTGATGTGCTTCACTCGTTTTACTCCCTTGCATGGCTTTCTCTG
TCGGGGGAGGCTGGTGTCCAAGAAGATATGGACGTTGCTCTGGGCGTCAC
CAGAGGGGCGGCTGAACGGTTGGGAAGACATCGTATGCGGTGGAAGGAGC
ATGCGCCTTGAGTGGGTTTGCCAAGATTCCTGGCGCCCCGTCTGATGTGC
TTCACTCGTTTTACTCCCTTGCATGGCTTTCTCTGTCGGGGGAGGCTGGT
GTCCAAGAAGATATGGACGTTGCTCTGGGCGTCACCAGAGGGGCGGCTGA
ACGGTTGGGAAGACATCGTATGCGGTGGAAGGAGCATGCGCCTTGA
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