mRNA_L-elsbetiae_contig7481.16372.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7481.16372.1
Unique NamemRNA_L-elsbetiae_contig7481.16372.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 516 bits (1329), Expect = 1.940e-181
Identity = 247/329 (75.08%), Postives = 283/329 (86.02%), Query Frame = 1
Query:    1 CSGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            CSGWVKGIGGN AP+  LGYGDVTVV  ++GG V VL+ NAAHVPE PHNL+S+S LAE GHTY+G KGGLTLTT AGG +WFPR GKLLTQEGYQ EP VDIACAA IVPG AKAATPTDLN  HNSHGH++E LL+KTA QQ V+LT GPL PC GCSM+KGQVK + KSTD+RA  KLFR+FL+LGG+M F SIGG+WYTLI+RDDC+RWTRV+FLK KS+AA AFE+YLA+YRA+   CEV++AR+D GGEFQG F +VCRR G+KQEFTPP+TPKYNGVAERALGL+ D+ALA+RIQAK +FPDAP SP LWAEAISCACHQMN
Sbjct:   14 CSGWVKGIGGNNAPVPPLGYGDVTVVFLTEGGRVPVLILNAAHVPESPHNLLSLSALAEEGHTYSGQKGGLTLTTRAGGKVWFPRPGKLLTQEGYQIEPKVDIACAATIVPGDAKAATPTDLNSDHNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMN 342          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5L1A7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A7_9PHAE)

HSP 1 Score: 503 bits (1294), Expect = 2.000e-172
Identity = 239/328 (72.87%), Postives = 282/328 (85.98%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SGWVKG+GG+KAP+ +LGYGDVT+VL+++GG V V V NAAHVPE P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLLTQ GYQ +PT+ IACA +IVPG AKAA PTDLN+YH +HGH++E LLR TA QQ V+LTDGPL PC GCSM+KGQVK V+K T +RAVKKL RV+LDL GKM   SIGG+WY LI+RDD SRWTR +FLK KS+AA+ FEK+LA+YR KG  CEVY AR+D GGEFQG F +VCRRHG+K+EFTPPHTPKYN VAERALGLITDAALA+RIQAK L+PDAP+ P LW EAISCACHQ+N
Sbjct:   12 SGWVKGVGGDKAPVPLLGYGDVTLVLQTEGGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHIACAVLIVPGDAKAANPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKGTSTRAVKKLCRVYLDLEGKMKTRSIGGNWYKLIIRDDFSRWTRGFFLKHKSDAAIGFEKFLADYRTKGIPCEVYFARTDGGGEFQGQFAEVCRRHGIKEEFTPPHTPKYNSVAERALGLITDAALASRIQAKQLYPDAPNHPGLWTEAISCACHQLN 339          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5JIN8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN8_9PHAE)

HSP 1 Score: 500 bits (1288), Expect = 2.960e-172
Identity = 243/328 (74.09%), Postives = 281/328 (85.67%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SGW+K IGG+KAP+ +LGYG VT+VL+++ G V V V NAAHVPE P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLLTQ GYQ +PT+  ACAA+IVPG AKAA PTDLN YH +HGH+NE LLR TA QQ V+LTDGPL PC GCSM+KGQVK V+KST +RAVKKLFRV+LDLGGKM   SIGG+WYTLI+RDDCSRWT V+F    S+AAV FEK LA+YR KG  C+VYIAR+D GGEFQG F +VCRRHG+KQEFTPPHTPKYNGVAERALGLITDAALA+RIQA  LFPDAP+ P LWAEAISCACHQ+N
Sbjct:  220 SGWMKRIGGDKAPVPLLGYGGVTLVLQTEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVPGDAKAANPTDLNGYHPAHGHANETLLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDCSRWTCVFFFNH-SDAAVGFEKSLADYRTKGVPCKVYIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLN 546          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5JZ88_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ88_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 4.350e-169
Identity = 236/328 (71.95%), Postives = 280/328 (85.37%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SGWVKGIGG+KAP+ +LGYGDVT+VL+++ G V V V NAA V E P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLLTQ GYQ +PT+  ACAA+IVPG AK ATPT LN+YH ++GH++E +LR TA QQ V+LTDGPL PC GCSM+KGQVK V+KST +RAV ++F V+LDLG  M   SIGGSWYTLI+RDD SRWTR +FLK KS+AAV FEK+LA+YR KG+ CEV+IAR+D GGEFQG F +VCRRHG+KQEFTPPHT KYNGVAERALGLITDAALA+RIQA  LFPDAP+ P LWAEAISCACHQ+N
Sbjct:   15 SGWVKGIGGDKAPVPLLGYGDVTLVLQTEDGGVPVPVLNAAQVREAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVPGDAKEATPTYLNEYHLANGHAHETMLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKSTSTRAVIRIFHVYLDLGRNMKTRSIGGSWYTLIIRDDFSRWTRDFFLKHKSDAAVGFEKFLADYRTKGAPCEVHIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTQKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLN 342          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5KPZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ8_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 9.680e-165
Identity = 234/322 (72.67%), Postives = 275/322 (85.40%), Query Frame = 1
Query:   19 GIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQM 984
            GIGG+KAP+ +LGYGDVT+VL+++ G V V V NAAHVPE P+ L+S S+LAE GHTY+G+KGG+TLTT AGG++WFPRTGKLLTQ GYQ +PT+  ACAA+IVPG AKAA PTDLN+YH +HGH++E LLR TA QQ V+LTDGPL PC GCSM+KGQVK V+KST SRAV K+FRV+LDLGGKM   SIGG+WYTLI+RDD SRWTRV+FLK KS+AAV FEK+LA+YR +G  C+VYIAR+D GGEFQG F +VCRRHG+KQE TPPHTP Y  VAERALGLITDAALA+RIQA  LFPDAP+ P LWAEAISCACHQ+
Sbjct:  307 GIGGDKAPIPLLGYGDVTLVLQTEDGGVPVPVLNAAHVPEAPYKLLSQSSLAEEGHTYSGMKGGITLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVPGDAKAANPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKSTSSRAVTKIFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTEGVPCKVYIARTDGGGEFQGQFAEVCRRHGIKQELTPPHTPIYKDVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQL 628          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE)

HSP 1 Score: 466 bits (1199), Expect = 2.580e-162
Identity = 233/349 (66.76%), Postives = 273/349 (78.22%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKG---------------------QVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SG VKGIGG+KAP+   GYGDVT VL+++ G V V + NAAHVPE P+NL+S+S+LAE GHTY+G+KGG+TLTT AGG++WFPRTGKLLTQ GYQ +PT+  ACAA+IVPG AKAA PT+ N+YH +HGH +E LLR TA QQ V+LTDGPL PC GCS+ KG                     QVK V+KST +RA KKLFRV+LDLGGKM   SIG  WYTL++RDD SRWTRV+FLK KS+AAV FEK+L +YR K   CEVYI R+D+GGEFQG F +V RRHG+KQEFTPPHTPKYN VAERALGLITDAALA+RIQA   FPDAP+ P LWAEAISCACHQ+N
Sbjct:   15 SGCVKGIGGDKAPVPFSGYGDVTFVLQTEDGGVPVPILNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGITLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVPGDAKAANPTEPNEYHLAHGHDHETLLRITAEQQGVQLTDGPLLPCLGCSVFKGXXXXXXXXXXXXXXXXXXXXXQVKPVQKSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTPPHTPKYNDVAERALGLITDAALASRIQATQPFPDAPNHPGLWAEAISCACHQLN 363          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 4.750e-162
Identity = 238/328 (72.56%), Postives = 279/328 (85.06%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SGWVKGIGG+KAP+ +LGYGDVT+VL+++ G V V V NAAHVPE P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLLTQ GYQ +PT+   CAA+IVPG AKAA PTDLN+YH +HGH++E LLR TA QQ V+LTDGPL PC GCSM+K QVK V+K T +RAV+  FRV+LDL G M   SIGG+WYTLI+RDD SRWTRV+FLK KS+AAV FEK+LA+YR  G  CE +IAR+D GGEFQG F +VCRRHG+KQEFTPPHTPKYNGVAERALGLITDAALA+RIQA  LFPDAP+ P LWAEAISCACHQ+N
Sbjct:  521 SGWVKGIGGDKAPVPLLGYGDVTLVLQAEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTTCAALIVPGDAKAANPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKAQVKPVQKCTSTRAVQNFFRVYLDLEGTMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTNGVPCEDFIARADGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLN 848          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5JM30_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM30_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 1.100e-159
Identity = 240/331 (72.51%), Postives = 277/331 (83.69%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALG---LITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            SGWVKGIGG  AP+   GYGDV++VL+++ G V   V NAAHV E P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLLTQ GYQ +PT+  ACAA+IV G AKAA PTDLN+YH +HG + E LLR TA QQ V+LTDGPL PC GCSM+ GQVK V+KST +RAVKKLFRV+LDLGGKM   SIGG+WYTLI+RDD SRWTRV+FLK KS+AAV  EK+LA+YR KG  CEVYIAR+D GGEFQG F +VCRRHG+KQEFTPPHTPKYNGVAERALG   LITDAALA+RIQA  LFPDAP+ P LWAEAISCACHQ+N
Sbjct:  466 SGWVKGIGGGTAPVLFRGYGDVSLVLQTEDGGVHGPVLNAAHVAEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLTQRGYQIKPTLHTACAALIVSGDAKAANPTDLNEYHLAHGQARETLLRITAEQQGVQLTDGPLLPCLGCSMSTGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGLEKFLADYRTKGVPCEVYIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERALGALGLITDAALASRIQATQLFPDAPNHPGLWAEAISCACHQLN 796          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5KZI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI6_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 8.840e-151
Identity = 224/324 (69.14%), Postives = 264/324 (81.48%), Query Frame = 1
Query:    4 SGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCAC 975
            SGWVKGIGG+KAP+ +LGYGDVT+VL+++ G V V V NAAHVPE P+NL+S+S+LAE GHTY+G+KGGLTLTT AGG++WFPRTGKLL Q GYQ +PT+  ACAA+I  G AKA TPTDLN+YH +HGH++E LLR TA QQ V+LTDGPL PC GCSM+KGQVK V+KST +RAVKKLFRV+LDLGGKM   SIGG+WYTLI+RDD SRWTRV+FLK KS+AAV FEK+LA+YR KG  CEVY+AR+D GGEFQG F +VCRRHG KQ+FTPPHTPK NGVA+RAL LITDAAL + IQA           +LWA A    C
Sbjct:  319 SGWVKGIGGDKAPVPLLGYGDVTLVLQTEDGGVPVPVLNAAHVPEAPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGGEVWFPRTGKLLAQRGYQIKPTLHTACAALIGSGDAKAVTPTDLNEYHLAHGHAHETLLRITAEQQGVQLTDGPLLPCLGCSMSKGQVKPVQKSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTKGVPCEVYVARTDGGGEFQGQFAEVCRRHGNKQKFTPPHTPKNNGVAQRALVLITDAALVSSIQA-----------TLWARASDAVC 631          
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 1.470e-144
Identity = 227/329 (69.00%), Postives = 272/329 (82.67%), Query Frame = 1
Query:    1 CSGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHNLISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPTVDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTDGPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGSWYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARSDNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAARIQAKLLFPDAPSSPSLWAEAISCACHQMN 987
            C+  VKGIGG    L ILGYGDVTVVL+S+G  V V +  AAHVP +  NLIS+++L E GHTYAG  GGL LTT AG ++WFP+ GKLL+  GYQTEP VD ACAA+IVPG+AKAATPTDLN++HNSHGH++E LLR TA QQ VELT GPL  C GCSMAKGQVK+V++ TD+RAVKKLFRVF+DLGG+M F SIGG WYTLI+R D +RWTRV+FLKRKSEAA A E+++A+YR++G+ CEVY+ RSDN  EFQG F   CR+ G+KQE TPPHTPKYNGVAER LG+I+DAALA+RIQAK +FPDAP+ P+LWAEAI+CACHQ+N
Sbjct:  582 CNRRVKGIGGEF--LRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGEAKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDN--EFQGQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDAPTDPALWAEAIACACHQLN 906          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7481.16372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL52_9PHAE1.940e-18175.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L1A7_9PHAE2.000e-17272.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN8_9PHAE2.960e-17274.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZ88_9PHAE4.350e-16971.95Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KPZ8_9PHAE9.680e-16572.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGJ8_9PHAE2.580e-16266.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JAQ2_9PHAE4.750e-16272.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM30_9PHAE1.100e-15972.51Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KZI6_9PHAE8.840e-15169.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L175_9PHAE1.470e-14469.00Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7481contigL-elsbetiae_contig7481:8610..9596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.8
Seed ortholog evalue7.8e-23
Seed eggNOG ortholog164328.Phyra87230
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size987
Cds size987
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816831.9630382-CDS-L-elsbetiae_contig7481:8609..95961622816831.9630382-CDS-L-elsbetiae_contig7481:8609..9596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7481 8610..9596 +
1691683846.9518673-CDS-L-elsbetiae_contig7481:8609..95961691683846.9518673-CDS-L-elsbetiae_contig7481:8609..9596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7481 8610..9596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7481.16372.1prot_L-elsbetiae_contig7481.16372.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7481 8610..9596 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7481.16372.1

>prot_L-elsbetiae_contig7481.16372.1 ID=prot_L-elsbetiae_contig7481.16372.1|Name=mRNA_L-elsbetiae_contig7481.16372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
CSGWVKGIGGNKAPLSILGYGDVTVVLKSKGGWVSVLVPNAAHVPEIPHN
LISISTLAEGGHTYAGVKGGLTLTTAAGGDIWFPRTGKLLTQEGYQTEPT
VDIACAAVIVPGQAKAATPTDLNDYHNSHGHSNEFLLRKTAAQQKVELTD
GPLKPCDGCSMAKGQVKSVKKSTDSRAVKKLFRVFLDLGGKMPFASIGGS
WYTLIVRDDCSRWTRVYFLKRKSEAAVAFEKYLAEYRAKGSICEVYIARS
DNGGEFQGAFGDVCRRHGVKQEFTPPHTPKYNGVAERALGLITDAALAAR
IQAKLLFPDAPSSPSLWAEAISCACHQMN
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mRNA from alignment at L-elsbetiae_contig7481:8610..9596+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7481.16372.1 ID=mRNA_L-elsbetiae_contig7481.16372.1|Name=mRNA_L-elsbetiae_contig7481.16372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=987bp|location=Sequence derived from alignment at L-elsbetiae_contig7481:8610..9596+ (Laminarionema elsbetiae ELsaHSoW15)
TGTAGTGGTTGGGTGAAGGGGATTGGCGGAAACAAAGCCCCCCTCTCCAT CCTGGGATACGGTGACGTCACCGTAGTCCTAAAGTCGAAAGGTGGGTGGG TGTCTGTGCTGGTTCCCAACGCGGCTCATGTGCCCGAAATACCGCACAAC CTTATTTCGATCAGTACGTTGGCAGAGGGGGGCCACACGTACGCGGGGGT AAAGGGAGGACTTACCCTTACCACCGCAGCCGGGGGGGATATATGGTTCC CTCGCACCGGCAAACTACTCACTCAAGAAGGCTATCAAACCGAGCCTACG GTAGACATCGCATGTGCCGCAGTAATTGTTCCTGGTCAAGCGAAAGCGGC CACCCCCACTGACCTAAACGATTACCACAACTCGCACGGCCACTCCAACG AGTTTCTGCTCAGAAAAACGGCGGCTCAGCAGAAGGTGGAACTGACGGAT GGACCGCTCAAGCCCTGCGACGGCTGCTCGATGGCGAAGGGGCAAGTGAA GTCCGTGAAGAAGAGCACTGACAGCCGCGCAGTTAAGAAGCTGTTCCGCG TTTTTCTCGATTTGGGTGGAAAAATGCCGTTCGCCAGCATTGGGGGGAGT TGGTACACCCTCATAGTCAGAGACGACTGCTCCCGTTGGACGCGTGTATA CTTCCTGAAGCGCAAGTCTGAAGCAGCGGTTGCGTTTGAGAAGTATCTGG CGGAATACCGCGCAAAGGGGTCAATCTGTGAGGTATACATCGCGCGCTCA GACAACGGTGGCGAGTTCCAGGGGGCCTTTGGGGACGTTTGCCGCCGTCA CGGCGTCAAGCAAGAATTCACCCCACCTCACACACCCAAGTACAACGGTG TTGCCGAGAGAGCGCTAGGGTTGATCACCGATGCCGCTCTTGCGGCGCGC ATCCAAGCGAAATTACTCTTTCCTGATGCGCCGTCTTCGCCCTCGTTGTG GGCGGAAGCCATTTCGTGTGCATGCCATCAAATGAAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7481:8610..9596+

>mRNA_L-elsbetiae_contig7481.16372.1 ID=mRNA_L-elsbetiae_contig7481.16372.1|Name=mRNA_L-elsbetiae_contig7481.16372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7481:8610..9596+ (Laminarionema elsbetiae ELsaHSoW15)
TGTAGTGGTTGGGTGAAGGGGATTGGCGGAAACAAAGCCCCCCTCTCCAT
CCTGGGATACGGTGACGTCACCGTAGTCCTAAAGTCGAAAGGTGGGTGGG
TGTCTGTGCTGGTTCCCAACGCGGCTCATGTGCCCGAAATACCGCACAAC
CTTATTTCGATCAGTACGTTGGCAGAGGGGGGCCACACGTACGCGGGGGT
AAAGGGAGGACTTACCCTTACCACCGCAGCCGGGGGGGATATATGGTTCC
CTCGCACCGGCAAACTACTCACTCAAGAAGGCTATCAAACCGAGCCTACG
GTAGACATCGCATGTGCCGCAGTAATTGTTCCTGGTCAAGCGAAAGCGGC
CACCCCCACTGACCTAAACGATTACCACAACTCGCACGGCCACTCCAACG
AGTTTCTGCTCAGAAAAACGGCGGCTCAGCAGAAGGTGGAACTGACGGAT
GGACCGCTCAAGCCCTGCGACGGCTGCTCGATGGCGAAGGGGCAAGTGAA
GTCCGTGAAGAAGAGCACTGACAGCCGCGCAGTTAAGAAGCTGTTCCGCG
TTTTTCTCGATTTGGGTGGAAAAATGCCGTTCGCCAGCATTGGGGGGAGT
TGGTACACCCTCATAGTCAGAGACGACTGCTCCCGTTGGACGCGTGTATA
CTTCCTGAAGCGCAAGTCTGAAGCAGCGGTTGCGTTTGAGAAGTATCTGG
CGGAATACCGCGCAAAGGGGTCAATCTGTGAGGTATACATCGCGCGCTCA
GACAACGGTGGCGAGTTCCAGGGGGCCTTTGGGGACGTTTGCCGCCGTCA
CGGCGTCAAGCAAGAATTCACCCCACCTCACACACCCAAGTACAACGGTG
TTGCCGAGAGAGCGCTAGGGTTGATCACCGATGCCGCTCTTGCGGCGCGC
ATCCAAGCGAAATTACTCTTTCCTGATGCGCCGTCTTCGCCCTCGTTGTG
GGCGGAAGCCATTTCGTGTGCATGCCATCAAATGAACTGTAGTGGTTGGG
TGAAGGGGATTGGCGGAAACAAAGCCCCCCTCTCCATCCTGGGATACGGT
GACGTCACCGTAGTCCTAAAGTCGAAAGGTGGGTGGGTGTCTGTGCTGGT
TCCCAACGCGGCTCATGTGCCCGAAATACCGCACAACCTTATTTCGATCA
GTACGTTGGCAGAGGGGGGCCACACGTACGCGGGGGTAAAGGGAGGACTT
ACCCTTACCACCGCAGCCGGGGGGGATATATGGTTCCCTCGCACCGGCAA
ACTACTCACTCAAGAAGGCTATCAAACCGAGCCTACGGTAGACATCGCAT
GTGCCGCAGTAATTGTTCCTGGTCAAGCGAAAGCGGCCACCCCCACTGAC
CTAAACGATTACCACAACTCGCACGGCCACTCCAACGAGTTTCTGCTCAG
AAAAACGGCGGCTCAGCAGAAGGTGGAACTGACGGATGGACCGCTCAAGC
CCTGCGACGGCTGCTCGATGGCGAAGGGGCAAGTGAAGTCCGTGAAGAAG
AGCACTGACAGCCGCGCAGTTAAGAAGCTGTTCCGCGTTTTTCTCGATTT
GGGTGGAAAAATGCCGTTCGCCAGCATTGGGGGGAGTTGGTACACCCTCA
TAGTCAGAGACGACTGCTCCCGTTGGACGCGTGTATACTTCCTGAAGCGC
AAGTCTGAAGCAGCGGTTGCGTTTGAGAAGTATCTGGCGGAATACCGCGC
AAAGGGGTCAATCTGTGAGGTATACATCGCGCGCTCAGACAACGGTGGCG
AGTTCCAGGGGGCCTTTGGGGACGTTTGCCGCCGTCACGGCGTCAAGCAA
GAATTCACCCCACCTCACACACCCAAGTACAACGGTGTTGCCGAGAGAGC
GCTAGGGTTGATCACCGATGCCGCTCTTGCGGCGCGCATCCAAGCGAAAT
TACTCTTTCCTGATGCGCCGTCTTCGCCCTCGTTGTGGGCGGAAGCCATT
TCGTGTGCATGCCATCAAATGAAC
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