mRNA_L-elsbetiae_contig7480.16370.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: D7G1B2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1B2_ECTSI) HSP 1 Score: 187 bits (474), Expect = 1.650e-48 Identity = 128/272 (47.06%), Postives = 146/272 (53.68%), Query Frame = 1 Query: 682 GGSLPTTPGGPDADEAL-----PPAELRGGEREDAAKAXXXXXXXXXXXXXXXXXXXXXXXALEGSDASSQTTAQTLLSMVRPSYWRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARTAGGEGGRDRGGVRLAGTGPAEVEGGGSCPVDESAMKE-SLCELDLAV-PPPPTAXXXQAAPLKLPGLVCGGSTIVTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAWASGHQ 1476 G S+P+TPG P DE L PPAE+ G RED A A +Q+TAQ LSMV+PSYWR+ G GG DR V + G + E S P+ S + SL D V P PP A APL+LPGLVCGGSTIVTH+TLARM+AAQPKHHRGYNWYLL+ST RDGASYTTLYNRI E+PTFL+VESM GEVFGGFATSAW+SG Q Sbjct: 285 GCSMPSTPGFPSVDEGLAPAGLPPAEMWAGTREDPGNAAAFAAAQS---------------AARDVSEVAQSTAQAFLSMVKPSYWRSDSEGGGGPAGESPVGFGDGRR-----------------GERGGSDRW-VSVPGGAGSFEETASSGPILHSLADDASLFPGDPGVRPSPPPAE----APLQLPGLVCGGSTIVTHTTLARMEAAQPKHHRGYNWYLLYSTFRDGASYTTLYNRIQGEEPTFLIVESMRGEVFGGFATSAWSSGCQ 519
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A7S3XVE5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE5_HETAK) HSP 1 Score: 80.5 bits (197), Expect = 4.050e-14 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 1228 PGLVCGGSTIVTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 P L+ G S + L ++ P+H R YNW + +S LRDGASYTT + +I+ ED L+V + DGEVFGGF T W Sbjct: 55 PKLINGPSNFIPEEALPQLKLLIPEHLRDYNWCMYYSLLRDGASYTTFFEKISMEDNLLLIVHTFDGEVFGGFNTQGW 132
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A1V9ZKV2_9STRA (Oxidation resistance protein 1 isoform X9 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKV2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 8.670e-10 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 1255 IVTHST-----LARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAWA 1464 I++H T + R++A P HRGY+W + +S + GAS TLY + + PT +VVE+ DG+VFGGFA+ WA Sbjct: 183 ILSHPTYTKYLVPRLEACLPARHRGYDWKIAYSLAQHGASLGTLYRNVKGKRPTLVVVETGDGDVFGGFASMPWA 257
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A024TZH0_9STRA (TLDc domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZH0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.230e-7 Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 1225 LPGLVCGGSTI------VTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 +P L+ G ST V+ + +++A P R NW L FS + GAS TL++R+ ++ T +V+E+ DG++FGGFAT+ W Sbjct: 135 MPELIGGSSTDILSDPKVSKFLVPKIEACLPYRFRHKNWKLSFSLAQHGASLHTLFHRVRRQETTIVVIETADGDIFGGFATAPW 219
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A6A5AIH8_9STRA (TLDc domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIH8_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.220e-7 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 1258 VTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 VT + +++A P + NW L FS + GAS TL+ R+ ++ T +VVE+ DG++FGGFAT+ W Sbjct: 126 VTKYLVPKIEACLPYRFKHKNWKLSFSLAQHGASLHTLFRRVRRQESTIVVVETEDGDIFGGFATAPW 193
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A024G175_9STRA (TLDc domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G175_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 8.130e-7 Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 1273 LARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 + + A+ P R YNW LL+++ GAS T +R+ + PT +++E++ G+VFGGF T+ W Sbjct: 126 MGSLQASLPHRFRNYNWNLLYTSSHHGASLETFMHRVKNDSPTLILLETVHGDVFGGFVTTPW 188
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A6G0WUP9_9STRA (TLDc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUP9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 2.020e-6 Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 1225 LPGLVCGGSTI------VTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 LP L+ GG V+ + +++A P +R NW L +S + GAS TLY R+ + D + +++E+ DG++FGGF+ W Sbjct: 120 LPQLIGGGPNDILSDPKVSKYLVPKLEACLPYRYRHKNWKLSYSLAQHGASLHTLYRRVRSHDASLVIIETDDGDIFGGFSMGTW 204
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A7S3PRC9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRC9_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.630e-6 Identity = 25/71 (35.21%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 1249 STIVTHSTLARMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 S+I++ L ++ P R WY+L+ + RDG S+ TLYN +NAE +++ +++G++FG F+T W Sbjct: 84 SSILSQRQLTKLWKKLPYRKRVSFWYMLYDSNRDGLSFLTLYNAVNAEVEAIMIMRTVEGDIFGFFSTEPW 154
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A507C4N9_9FUNG (TLDc domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C4N9_9FUNG) HSP 1 Score: 61.2 bits (147), Expect = 3.460e-6 Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 1 Query: 1186 PPTAXXXQAAPLKLPGLVCGGSTIVTHSTLARMDAA-QPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAW 1461 PP + P ++ + S +++H + +D++ P H W LLFST RDG S+T N I T L++ G VFGGFA+ AW Sbjct: 736 PPASTEKTPRPFRVAPTLSRPSLLLSHEDVLTIDSSLAPNHRISTEWPLLFSTQRDGKSWTLFQNSIQDAGATLLIIRDKQGCVFGGFASEAW 828
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Match: A0A485L1D5_9STRA (Aste57867_14396 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1D5_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 5.290e-6 Identity = 25/63 (39.68%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 1279 RMDAAQPKHHRGYNWYLLFSTLRDGASYTTLYNRINAEDPTFLVVESMDGEVFGGFATSAWAS 1467 ++++ P R NW L +S + GAS T++ R+ A + T ++VE+ DG++FGGFAT W+S Sbjct: 211 KLESCLPYRFRHKNWRLAYSLGQHGASLHTMFRRVRAAEATLVIVETDDGDIFGGFATEPWSS 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7480.16370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7480.16370.1 >prot_L-elsbetiae_contig7480.16370.1 ID=prot_L-elsbetiae_contig7480.16370.1|Name=mRNA_L-elsbetiae_contig7480.16370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=492bp VLKTTGPDKPTDGREIAPAPAPPTPGTGQEEARPAPARAAGVSMTTPAASback to top mRNA from alignment at L-elsbetiae_contig7480:5192..9154+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7480.16370.1 ID=mRNA_L-elsbetiae_contig7480.16370.1|Name=mRNA_L-elsbetiae_contig7480.16370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3963bp|location=Sequence derived from alignment at L-elsbetiae_contig7480:5192..9154+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7480:5192..9154+ >mRNA_L-elsbetiae_contig7480.16370.1 ID=mRNA_L-elsbetiae_contig7480.16370.1|Name=mRNA_L-elsbetiae_contig7480.16370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2952bp|location=Sequence derived from alignment at L-elsbetiae_contig7480:5192..9154+ (Laminarionema elsbetiae ELsaHSoW15)back to top |