mRNA_L-elsbetiae_contig7461.16351.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI) HSP 1 Score: 551 bits (1419), Expect = 4.620e-183 Identity = 411/691 (59.48%), Postives = 429/691 (62.08%), Query Frame = 1 Query: 1 GAGGSASAKXXXXXXXKGALPPL-PPILRLLSADVLTEACTLLDARSLATAAGVCRSFRDVCQGPYPWRHLCAREWALPSVEGE------AAAAAAALPRNRLRFRDSILGSDFRKLFPLIEQMPSGFDCALLRDSSDNXXXXXXXXGNHLAGGXXXXXXXXXXXXXXXXXEVGDANXXXXXXXXXXXXXXXXXXXXXXD----------PEEAGEEVGDFLIMGVRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAERGRPRYYSPGDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAEARASLARHLETSPLALFRWLLAKMASTAGAGGXXXXXXXXXXXXXXARGSGEGAPSAASRFFAHXXXXXXXXXXXXXXXXXXXD-GLGHEAEGXXXXXXXXXXXXXSHALMAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPTLPRVLCFPVALGRGVVDVTPRLVSYFEVTIMTPRVDPPHAIPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLGGEPFRFDLAGALRRGGQEKAARESVAQHHPQRCR 2019 GA G A AK PPL PP+LRLLSADVLTEACTLLD RSLATAA CRSFRDVCQG YPWR LC REW L E A+A A +PR+RL FRDSILG DFRKLFPLIEQMP+GFDC+LLR S G + A G G A XXXXXXXXXXXXXXXXXXXXXX PEEA E+ GDF+I GVRR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGA AR+SLARHLETSPLALFRWLLAKMA+TA G XXXXXXXXXXXXXX S F H GLG + S G EKP LPRVLCFPVALGRGVVDVTPRLVSYFEVTI+ PR+D PH IPDCIA+GVSE RFPLKGKMPGWD+ SYGYHSDDGGAFHDAGSMLFKCGPSFG GDVVGCGLDYSVG D ADIFFTLNGE L G+ AAFRGVRGTFYPTVGVDSACPVRINLG EPFR DLA ALR GGQE ARESVAQH P+R R Sbjct: 31 GASGVAGAKEDEGDGAAALPPPLLPPVLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCREWELSDATEEEEGXXXASAPAVQVPRSRLHFRDSILGCDFRKLFPLIEQMPTGFDCSLLRGGSP-------ASGANNADGADAQEPDDDNHQQEANNHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPEEAEEKAGDFVIRGVRRRPAKRPLSPGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------GDVALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAGARSSLARHLETSPLALFRWLLAKMAATASGGAXXXXXXXXXXXXXXXXXSAVHPGLVGDHQFQHNAQQQQAGGVAFAAPGAMLQAGLGQDGAAATGERRRRASSLPSGGPDGAGASGGGQHG------------------------------------EKPKLPRVLCFPVALGRGVVDVTPRLVSYFEVTIIAPRLDAPHPIPDCIAVGVSESRFPLKGKMPGWDSRSYGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGS----------------AAFRGVRGTFYPTVGVDSACPVRINLGEEPFRLDLAAALREGGQEATARESVAQHEPKRSR 644
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 189 bits (480), Expect = 7.110e-46 Identity = 152/384 (39.58%), Postives = 174/384 (45.31%), Query Frame = 1 Query: 823 ALQVEFRGGLGVGNRCVRADLPLPSTVLRERTGAEARASLARH-LETSPLALFRWLLAKMASTAGAGGXXXXXXXXXXXXXXARGSGEGAPSAASRFFAHXXXXXXXXXXXXXXXXXXXDGLGHEAEGXXXXXXXXXXXXXSHALMAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPTLPRVLCFPVALGRGVVDVTPRLVSYFEVTIMTPRVDPPHA-IPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDR-ADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVR-GTFYPTVGVDSACPVRINLGGE-PFRFDLAGALRR 1959 AL VE+ GG+G+GNRCVR D P PS + ER AR+ ARH PLAL + K+ AGG S P AAS A LG G HA T P P+ G VD + R+VSYFEV+I PR A +P+CIAIG+SEE+F L+GKMPGWD+CSYGYHSDDGGAFH+AGSMLF+ GP+FG GDVVGCGLDYS G ADIFFTLNG L AF GVR G YPTVG+DSA PVRINLGG PF F + GA R Sbjct: 1158 ALLVEYTGGVGLGNRCVRTDAPFPSPRIWERRSLAARS--ARHGAAAGPLAL----MYKLLRAVHAGGSH---------------SAAATPGAASAALAL---------------------LGATTCGASV-----------HAAA--------------------------------------------------TTPLPFSTPIWTAPGTVDASARVVSYFEVSI-APRTGARGAGVPECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFRYGPTFGRGDVVGCGLDYSHGGGVCADIFFTLNGRYLG-------------------VAFAGVRAGGLYPTVGIDSAAPVRINLGGAAPFAFGV-GAFER 1417
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A7S2Y3N2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3N2_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.340e-30 Identity = 79/180 (43.89%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 1456 VDVTPRLVSYFEVTIMTP------RVDPPH--AIP----DCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLG-GEPFRFDLAGALR 1956 + VTPRLV YFEV I+ P R H A+P DC+A+G+S +F L +M GWD+ SYGYH DDGG FH G ML + GP+FG GDVVGCG+DY R +FFTLNG L + N +YPTVG+D+ C V+ N G +PF+FDL +R Sbjct: 71 MSVTPRLVHYFEVNILPPPQEGETRPSTLHDAAVPRFSSDCVAVGISTNQFSLHTRMVGWDSYSYGYHGDDGGVFHCNGHMLREYGPTFGVGDVVGCGVDYH----RNAVFFTLNGRYLGDAFTNLEEENRESGNVFYEQ-------DWYPTVGIDTKCLVQCNFGTDQPFQFDLEKYMR 239
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A7S1GNI7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNI7_CYCTE) HSP 1 Score: 132 bits (332), Expect = 2.620e-29 Identity = 79/180 (43.89%), Postives = 101/180 (56.11%), Query Frame = 1 Query: 1453 VVDVTPRLVSYFEVTIM--TPR---------VDPPHAIPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGV-----RGTFYPTVGVDSACPVRINLGGEPFRFDLA 1944 VVDV+PRLVSYFE+TI+ TP +DP + DC+AIGVS + F + +MPGWD+ SYGYH DDGG FH +G M + GP+FG GD VGCG+D+ A IFF LNG+ L A+ G+ R YPT+GVD+ P+ N G F FDL+ Sbjct: 267 VVDVSPRLVSYFEITILEDTPAFPNQPVVTPMDP--QVADCVAIGVSTQEFSCQSRMPGWDSRSYGYHGDDGGIFHASGEMKRRFGPAFGKGDTVGCGVDHR----NAGIFFCLNGKFLG-------------------YAWTGLESFVARQELYPTIGVDTNHPIDANFGTRKFAFDLS 421
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A1Z5JU39_FISSO (B30.2/SPRY domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU39_FISSO) HSP 1 Score: 132 bits (331), Expect = 5.810e-29 Identity = 73/179 (40.78%), Postives = 98/179 (54.75%), Query Frame = 1 Query: 1444 GRGVVDVTPRLVSYFEVTIMTPRVDPP---------HAI----PDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLGGEPFRFDL 1941 GR VV+++PRL+SYFEV+IM+ VD H +C A+G++ E F L +MPGWD+CS+GYH DDGG FH G ML + GP+FG GDV+GCG+DY + IF+T NG+ L + +YP VG+DS ++ N G PF FDL Sbjct: 289 GRPVVNLSPRLISYFEVSIMSAPVDETTSNAARVLHHGFFRFEQECTAVGLANEYFALHSRMPGWDSCSFGYHGDDGGIFHKTGHMLREYGPTFGAGDVIGCGVDYH----KRAIFYTHNGKFL--------------GYAFTSLTDHELEKDWYPVVGIDSKSFIKCNFGQTPFLFDL 449
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A1Z5JW83_FISSO (B30.2/SPRY domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW83_FISSO) HSP 1 Score: 130 bits (326), Expect = 2.070e-28 Identity = 78/180 (43.33%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 1456 VDVTPRLVSYFEVTIMTPRVDPPHAIP-----------------DCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLG-GEPFRFDL 1941 V +TPRL+SYFEV+I +PR D P AIP DCI IGV +F +M GWD S+GYHSDDGG +H+ G M+ K GP+FG GD VGCG+DY R IFFTLNG L + + + YP VG+D+ CPV N G E F FDL Sbjct: 274 VHLTPRLISYFEVSIESPREDVP-AIPFRFTNHLNGPLRPRSEGDCIVIGVGTRKFHFSNRMAGWDDQSFGYHSDDGGVYHNQGQMIRKFGPTFGVGDTVGCGVDYQ----RRAIFFTLNGNFL--------------GYAFERLSLKILEQDLYPVVGLDTHCPVACNFGCDEGFLFDL 434
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A7S2JZ83_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ83_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.930e-28 Identity = 73/186 (39.25%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 1405 PTLPRVLCFPVALGRGVVDVTPRLVSYFEVTIMTP-----RVDPPHAIPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGT--FYPTVGVDSACPVRINLGGEPFRFDL 1941 P R P + G ++ TPRLV Y+EVT++ P + P +C+A+G+S FP KMPGWD+ SYGYHSDDGG FH G ML GP F GD VGCG+DY+ IF+TLNG L A+ G+ T +Y +GVD+ ++IN G P++F+L Sbjct: 258 PNAMRPFVAPYVMKNGQLNCTPRLVVYYEVTLVPPTRNQSQAASPRRTTECVAVGLSTSNFPHYAKMPGWDSFSYGYHSDDGGIFHAQGDMLRHYGPQFSSGDTVGCGIDYA----NHGIFYTLNGRFLG-------------------YAWLGIDTTMKYYACIGVDTDLALKINFGQYPYQFNL 420
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A7S1YBN1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBN1_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.130e-27 Identity = 83/213 (38.97%), Postives = 103/213 (48.36%), Query Frame = 1 Query: 1432 PVALGRGVVDVTPRLVSYFEVTIM-----TPRVDPPHAIP---------------------DCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLGG-EPFRFDLAGALRRGGQEKAARES 1989 P R +TPRLVSY+EV+I+ +PP + DC+A+G+S F G+MPGWD S+GYH DDGG FH G ML + G SFG GDVVGCG+DYS IFFTLNG+ L G N R YPTVG+D+ CPV N G EPF FDL + + A R++ Sbjct: 368 PYVNARSKTILTPRLVSYYEVSILEKPTTVDDTEPPALVRARIMNDNXXXXXXXXXXRTAYDCVAVGLSTANFSTHGRMPGWDHLSWGYHGDDGGLFHGCGDMLQRFGASFGQGDVVGCGVDYS----NNGIFFTLNGKFLGYGWVNLQELS---------------RLELYPTVGIDTNCPVHTNFGTTEPFEFDLEAFAKTRSEFAATRDA 561
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: K0SCU3_THAOC (B30.2/SPRY domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCU3_THAOC) HSP 1 Score: 129 bits (324), Expect = 3.220e-27 Identity = 77/181 (42.54%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1453 VVDVTPRLVSYFEVTIM---------TPRVDPP-----------HAIPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGVRGTFYPTVGVDSACPVRINLGGEPFRF 1935 +VDVTPRLV+YFEVTI TPR D +C+A+G+S +F + MPGWD SYGYH DDGG FH G GP FGPGD VGCGLDY+ IFF NGE L + D R ++ YPTVG+DS CP+ +N G PF+F Sbjct: 540 IVDVTPRLVAYFEVTIFPYQGDTIGTTPREDEGGVDNQEGQHVRRVRHECVAVGLSTAQFRDQSNMPGWDGNSYGYHGDDGGIFHGLGENKKSYGPKFGPGDNVGCGLDYA----SRRIFFCKNGEFLGHAFDR--------------VDERMIKAGLYPTVGLDSECPIFVNYGFRPFKF 702
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Match: A0A7S0PIR2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIR2_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.870e-27 Identity = 74/174 (42.53%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 1456 VDVTPRLVSYFEVTIMTPR----------VDPPHAIPDCIAIGVSEERFPLKGKMPGWDACSYGYHSDDGGAFHDAGSMLFKCGPSFGPGDVVGCGLDYSVGDDRADIFFTLNGESLRNGNDNGXXXXXXXXXXXXPAAFRGV--RGTFYPTVGVDSACPVRINLGGEPFRFDL 1941 ++VTPRLV+Y+EVTI R + + DC+A+G++ +RF K KMPGWD SYGYH DDGG FH G M+ + GP FG GD VGCG++++ IFFTLNG L A+ GV + FY +VGVDS P+ N G PF+FDL Sbjct: 289 INVTPRLVAYYEVTIHEKRSEDGALGTNIISEEENLIDCVAVGIATDRFNEKHKMPGWDNFSYGYHGDDGGIFHARGDMVKQYGPKFGVGDTVGCGINFA----NNGIFFTLNGIFLG-------------------YAWLGVCTQRPFYASVGVDSNFPISANFGRIPFKFDL 439 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7461.16351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7461.16351.1 >prot_L-elsbetiae_contig7461.16351.1 ID=prot_L-elsbetiae_contig7461.16351.1|Name=mRNA_L-elsbetiae_contig7461.16351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=664bp MPSGFDCALLRDSSDNDNDGDGDGGNHLAGGGGEEGEGAEGAAAGNGEEVback to top mRNA from alignment at L-elsbetiae_contig7461:4607..9496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7461.16351.1 ID=mRNA_L-elsbetiae_contig7461.16351.1|Name=mRNA_L-elsbetiae_contig7461.16351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4890bp|location=Sequence derived from alignment at L-elsbetiae_contig7461:4607..9496- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7461:4607..9496- >mRNA_L-elsbetiae_contig7461.16351.1 ID=mRNA_L-elsbetiae_contig7461.16351.1|Name=mRNA_L-elsbetiae_contig7461.16351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3984bp|location=Sequence derived from alignment at L-elsbetiae_contig7461:4607..9496- (Laminarionema elsbetiae ELsaHSoW15)back to top |