mRNA_L-elsbetiae_contig746.16346.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig746.16346.1
Unique NamemRNA_L-elsbetiae_contig746.16346.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig746.16346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig746contigL-elsbetiae_contig746:16913..18856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size435
Cds size435
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816830.3128738-CDS-L-elsbetiae_contig746:16912..173151622816830.3128738-CDS-L-elsbetiae_contig746:16912..17315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig746 16913..17315 +
1691683845.8934875-CDS-L-elsbetiae_contig746:16912..173151691683845.8934875-CDS-L-elsbetiae_contig746:16912..17315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig746 16913..17315 +
1622816830.3258977-CDS-L-elsbetiae_contig746:18824..188561622816830.3258977-CDS-L-elsbetiae_contig746:18824..18856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig746 18825..18856 +
1691683845.905726-CDS-L-elsbetiae_contig746:18824..188561691683845.905726-CDS-L-elsbetiae_contig746:18824..18856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig746 18825..18856 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig746.16346.1prot_L-elsbetiae_contig746.16346.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig746 16913..18856 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig746.16346.1

>prot_L-elsbetiae_contig746.16346.1 ID=prot_L-elsbetiae_contig746.16346.1|Name=mRNA_L-elsbetiae_contig746.16346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
KLCARHANEDDVMLLSPSKRRSSGVGNKSERPESDVGSGASGGGATRRAS
SGGRSRTRFDSPALAEIPSSTGTKTKKRPTAMGNLRPVRVKRERVDSSGE
MDEDQSRAWSEPDDAVVKAEDMEVHFKVESTEAAGGTEEEKSKRR
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mRNA from alignment at L-elsbetiae_contig746:16913..18856+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig746.16346.1 ID=mRNA_L-elsbetiae_contig746.16346.1|Name=mRNA_L-elsbetiae_contig746.16346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1944bp|location=Sequence derived from alignment at L-elsbetiae_contig746:16913..18856+ (Laminarionema elsbetiae ELsaHSoW15)
AAATTATGTGCACGGCATGCAAACGAAGACGACGTAATGCTTCTGTCTCC
TTCTAAGCGCAGATCTAGTGGTGTCGGCAACAAAAGTGAAAGGCCTGAGA
GTGATGTTGGCTCAGGAGCAAGCGGGGGTGGTGCAACCCGCCGTGCTAGC
TCCGGTGGAAGGAGCAGAACACGATTTGATTCGCCTGCACTGGCAGAGAT
TCCTTCCAGCACGGGCACGAAGACGAAGAAGCGGCCCACTGCTATGGGGA
ACCTACGGCCAGTTCGAGTGAAGAGAGAGCGCGTTGACAGCAGTGGCGAG
ATGGACGAAGACCAATCCAGGGCATGGTCGGAGCCAGATGATGCTGTAGT
GAAGGCAGAAGATATGGAGGTGCATTTTAAGGTGGAATCTACGGAGGCTG
CAGGTGCGTCCAAGCCTTCCCCGAGGTGGAGACAATAATGGGTTGGGTAG
ATGGAAATACATGGGAGCCGGTATTAGCTGAGCGGCGAACAAGGTGTGGC
AGTGCAGGGTCGATTTCGTGCCTCGCGGTATGGACTTGTTGGTGTATCGT
AATCGTCTGTGGTTCCCACCCCGGTAGTTAGTTCTCCCCCCCGCTACCAA
CGTTTCGGGCTGGAAGCATGACTTCGATGAGTTCCCCACTGGGGGGATTG
CATTTTTTCACGACCCCATCCCTTCACCCTCCGTATTGTTTCGAGCCCCT
TCCCCCGGGGGTTATTTATGGTGAGATCCTTTCGGGGGGTAGATAATTTC
CCCACTTGACACGTGCGTAAATTTTACCACCAAGGATCATGTTATTTGGG
GTGGAATACATGGGCTGTTGTCGACAGGCAGTACGAGTTCGTGACAGCGC
GCGTGTGCATCAAGTCACATCGAGCAACCTTGAAATGCCATCGTCGAAGT
GTTTTGGTTTTGATTCAGGTATACTATTTGGCATAGTTTGCAAAAAAGCA
ACCATCGCACGCACGCACGTAGAAAAGAATAAACACAGACTCACCAACCC
GATATCACCGCATGCCCTACCAATTACACCGGCTCGAGACATCTGCATTG
AGATATCCACATCATCAGCTACGCTTACCTACAGAGGCACTAACGAGCAC
CAGGACGCGCAGTCCCCACCAGCTTCATGCAGGCAAAAACGAGCCACAAG
AAACGATCGAGAACATTATTCACGTTCCTTGTCCAGCAAGCTCTTCTCCC
TGCCCCAAAACTACAGCTCCTCCTCAAGTCCACCCTCCTCCTATTTCTCC
TCTTCCCTAACCTTCTCCTCTTCCTTGTCCTCCCCCCTGTTGTGCTGCTG
CTCGTAGACCTTTGTGCATCTATCTGGCGTGCATCTATTTATCTGCTATG
CATGTTTGTGGTTGTTTTTTTGTTCCTCTCCCGGGTAGATCACGTAGATC
TCCTGCCGAGTAAGTTCGATGCCCCCTGCCCCCCCGCCCTCCTCGAGTTC
CCCCCCAAGGTGTGTTTATTCACCAAAGAAAAGATCCCCGCCCCGGATGG
AAGTCAGAGACGATTACGGTAGTTTGAAGGCGCCCAAATGCCGTGTTGCG
TACCGTGAAGACGGGAGGGCTGGTTGTTTAGTTGCCAGATGGTGATGTCT
AAATGTCTGTATCTGTTGAGTCAAGATTGTATGGATCGTTCGTTCGTTCG
TTGCACCAAAGCTTTCCGGTCCGGTTTTCTATTCGAGCATGTGGTATCTT
GTGCCGCTATGTAGAGTATATTTCGCCCAACCTGGTCCCGCTCGGAAACA
GTACGACTGCTTGGTACAGGTAGCATTGGCTTCCGCCGGGGCTAGGTCCA
TCACTTTGCCTGAGTTATCTTTCGCCATTGGCGCTTTAGGCGCCGTCCCC
ACTTGCTCGCCTGTGTTTCTGATGTGATTCCTCTTCATCGCGCCCCCCTT
CGATCATTCCAGGCGGAACCGAGGAAGAGAAGAGCAAGAGGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig746:16913..18856+

>mRNA_L-elsbetiae_contig746.16346.1 ID=mRNA_L-elsbetiae_contig746.16346.1|Name=mRNA_L-elsbetiae_contig746.16346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig746:16913..18856+ (Laminarionema elsbetiae ELsaHSoW15)
AAATTATGTGCACGGCATGCAAACGAAGACGACGTAATGCTTCTGTCTCC
TTCTAAGCGCAGATCTAGTGGTGTCGGCAACAAAAGTGAAAGGCCTGAGA
GTGATGTTGGCTCAGGAGCAAGCGGGGGTGGTGCAACCCGCCGTGCTAGC
TCCGGTGGAAGGAGCAGAACACGATTTGATTCGCCTGCACTGGCAGAGAT
TCCTTCCAGCACGGGCACGAAGACGAAGAAGCGGCCCACTGCTATGGGGA
ACCTACGGCCAGTTCGAGTGAAGAGAGAGCGCGTTGACAGCAGTGGCGAG
ATGGACGAAGACCAATCCAGGGCATGGTCGGAGCCAGATGATGCTGTAGT
GAAGGCAGAAGATATGGAGGTGCATTTTAAGGTGGAATCTACGGAGGCTG
CAGAAATTATGTGCACGGCATGCAAACGAAGACGACGTAATGCTTCTGTC
TCCTTCTAAGCGCAGATCTAGTGGTGTCGGCAACAAAAGTGAAAGGCCTG
AGAGTGATGTTGGCTCAGGAGCAAGCGGGGGTGGTGCAACCCGCCGTGCT
AGCTCCGGTGGAAGGAGCAGAACACGATTTGATTCGCCTGCACTGGCAGA
GATTCCTTCCAGCACGGGCACGAAGACGAAGAAGCGGCCCACTGCTATGG
GGAACCTACGGCCAGTTCGAGTGAAGAGAGAGCGCGTTGACAGCAGTGGC
GAGATGGACGAAGACCAATCCAGGGCATGGTCGGAGCCAGATGATGCTGT
AGTGAAGGCAGAAGATATGGAGGTGCATTTTAAGGTGGAATCTACGGAGG
CTGCAGGCGGAACCGAGGAAGAGAAGAGCAAGAGGAGAGCGGAACCGAGG
AAGAGAAGAGCAAGAGGAGA
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