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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 709 |
| Cds size | 708 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816830.1190135-CDS-L-elsbetiae_contig7457:1033..1223 | 1622816830.1190135-CDS-L-elsbetiae_contig7457:1033..1223 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7457 1034..1223 + |
| 1691683845.760871-CDS-L-elsbetiae_contig7457:1033..1223 | 1691683845.760871-CDS-L-elsbetiae_contig7457:1033..1223 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7457 1034..1223 + |
| 1622816830.1334393-CDS-L-elsbetiae_contig7457:1670..2188 | 1622816830.1334393-CDS-L-elsbetiae_contig7457:1670..2188 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7457 1671..2188 + |
| 1691683845.774094-CDS-L-elsbetiae_contig7457:1670..2188 | 1691683845.774094-CDS-L-elsbetiae_contig7457:1670..2188 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7457 1671..2188 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7457.16343.1 >prot_L-elsbetiae_contig7457.16343.1 ID=prot_L-elsbetiae_contig7457.16343.1|Name=mRNA_L-elsbetiae_contig7457.16343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
RGNRAAQNRRRMAEEDGDEAYFNESDDDEDDNQGPQPAEGATAAVAVGGD
PREANGGGGGGGGGLKLVAYDDEDDSDEEVVGADTAAAADDSDSANPAPS
SESPSSSKEEGEKGGGGGGSDGGGGRSVPSSSSDPTPMSVVPEGAAAAAA
AGGSGTKDSVEAGSGSSSGRSSGTSPVSNGGALPAGEAAAGQEGGGGGSE
GSSTGGGGGGGGSLSGSGELPLSPPPGRGDADAETE back to topmRNA from alignment at L-elsbetiae_contig7457:1034..2189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7457.16343.1 ID=mRNA_L-elsbetiae_contig7457.16343.1|Name=mRNA_L-elsbetiae_contig7457.16343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1156bp|location=Sequence derived from alignment at L-elsbetiae_contig7457:1034..2189+ (Laminarionema elsbetiae ELsaHSoW15)
AGGGGCAACCGGGCGGCACAGAACCGGCGGAGGATGGCTGAGGAGGACGG
GGACGAGGCTTACTTCAACGAGTCCGATGACGACGAGGACGACAACCAGG
GACCGCAGCCGGCCGAAGGGGCGACCGCGGCGGTGGCGGTGGGTGGCGAC
CCTCGCGAGGCGAACGGAGGAGGAGGAGGAGGAGGAGGAGGTGAGCCGGG
GCACGGCAAGAGGTTCTTGTCGCTTGGGGGGGGGGGAGGGGGGGTACGTA
TGTATTGCTTCTTTGTGTTTTGAATCTGCAGTCTTCGTTTTGCGTTTACG
ACAAGCGTTGGCTTACGCATGTACGTACATACAAGCTGCACCGGTGACGG
CGTGTCTAAAGTTGATACCTAAATGTGTTCGCGTGGAGCTTTCGGGGGGG
GGGGTATTTTAGAAAAGAGGCGGCGGGGGCATCGACCGACCAGGGGTGGG
AGGGGGGGGTGGGGGGTATCTCTCCCCCTCAAATGTATCCCCTTCCCTCC
CTCCCTCCCTCCCGCCAAGCTTTTCGCAACCACCAGGAACACCGACTGAC
TGACTGACTGACTGACTGACTGACTGACTGACTGACTGACTGTTCCATCC
CCTCCGATGGTGATGTCCCGTCTGATGCGAAAAGCAGGCTTAAAGCTGGT
CGCGTACGACGACGAGGACGACAGCGACGAAGAGGTAGTAGGCGCCGACA
CCGCCGCCGCCGCCGACGACTCCGACTCCGCCAACCCGGCCCCGTCATCG
GAGTCCCCATCCTCGAGCAAGGAAGAGGGCGAGAAGGGCGGCGGCGGCGG
CGGTAGTGACGGTGGCGGTGGCAGAAGCGTTCCTTCCTCCAGTTCTGACC
CGACGCCGATGTCGGTGGTTCCAGAAGGTGCCGCCGCGGCCGCCGCCGCC
GGCGGGAGTGGCACAAAGGATAGTGTAGAAGCCGGCAGCGGCAGCAGTAG
CGGGAGGAGTAGTGGGACTTCTCCGGTCTCGAACGGGGGGGCGCTACCCG
CGGGAGAAGCGGCGGCAGGGCAAGAAGGAGGAGGAGGAGGCTCCGAAGGA
AGCAGCACCGGCGGCGGCGGCGGCGGCGGTGGTTCTCTCAGCGGGAGCGG
CGAGTTACCCTTGTCGCCCCCGCCGGGGAGAGGTGATGCCGATGCGGAAA
CAGAGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7457:1034..2189+ >mRNA_L-elsbetiae_contig7457.16343.1 ID=mRNA_L-elsbetiae_contig7457.16343.1|Name=mRNA_L-elsbetiae_contig7457.16343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig7457:1034..2189+ (Laminarionema elsbetiae ELsaHSoW15)
AGGGGCAACCGGGCGGCACAGAACCGGCGGAGGATGGCTGAGGAGGACGG
GGACGAGGCTTACTTCAACGAGTCCGATGACGACGAGGACGACAACCAGG
GACCGCAGCCGGCCGAAGGGGCGACCGCGGCGGTGGCGGTGGGTGGCGAC
CCTCGCGAGGCGAACGGAGGAGGAGGAGGAGGAGGAGGAGAGGGGCAACC
GGGCGGCACAGAACCGGCGGAGGATGGCTGAGGAGGACGGGGACGAGGCT
TACTTCAACGAGTCCGATGACGACGAGGACGACAACCAGGGACCGCAGCC
GGCCGAAGGGGCGACCGCGGCGGTGGCGGTGGGTGGCGACCCTCGCGAGG
CGAACGGAGGAGGAGGAGGAGGAGGAGGAGGCTTAAAGCTGGTCGCGTAC
GACGACGAGGACGACAGCGACGAAGAGGTAGTAGGCGCCGACACCGCCGC
CGCCGCCGACGACTCCGACTCCGCCAACCCGGCCCCGTCATCGGAGTCCC
CATCCTCGAGCAAGGAAGAGGGCGAGAAGGGCGGCGGCGGCGGCGGTAGT
GACGGTGGCGGTGGCAGAAGCGTTCCTTCCTCCAGTTCTGACCCGACGCC
GATGTCGGTGGTTCCAGAAGGTGCCGCCGCGGCCGCCGCCGCCGGCGGGA
GTGGCACAAAGGATAGTGTAGAAGCCGGCAGCGGCAGCAGTAGCGGGAGG
AGTAGTGGGACTTCTCCGGTCTCGAACGGGGGGGCGCTACCCGCGGGAGA
AGCGGCGGCAGGGCAAGAAGGAGGAGGAGGAGGCTCCGAAGGAAGCAGCA
CCGGCGGCGGCGGCGGCGGCGGTGGTTCTCTCAGCGGGAGCGGCGAGTTA
CCCTTGTCGCCCCCGCCGGGGAGAGGTGATGCCGATGCGGAAACAGAGGC
TTAAAGCTGGTCGCGTACGACGACGAGGACGACAGCGACGAAGAGGTAGT
AGGCGCCGACACCGCCGCCGCCGCCGACGACTCCGACTCCGCCAACCCGG
CCCCGTCATCGGAGTCCCCATCCTCGAGCAAGGAAGAGGGCGAGAAGGGC
GGCGGCGGCGGCGGTAGTGACGGTGGCGGTGGCAGAAGCGTTCCTTCCTC
CAGTTCTGACCCGACGCCGATGTCGGTGGTTCCAGAAGGTGCCGCCGCGG
CCGCCGCCGCCGGCGGGAGTGGCACAAAGGATAGTGTAGAAGCCGGCAGC
GGCAGCAGTAGCGGGAGGAGTAGTGGGACTTCTCCGGTCTCGAACGGGGG
GGCGCTACCCGCGGGAGAAGCGGCGGCAGGGCAAGAAGGAGGAGGAGGAG
GCTCCGAAGGAAGCAGCACCGGCGGCGGCGGCGGCGGCGGTGGTTCTCTC
AGCGGGAGCGGCGAGTTACCCTTGTCGCCCCCGCCGGGGAGAGGTGATGC
CGATGCGGAAACAGAG back to top
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