mRNA_L-elsbetiae_contig7434.16324.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A6H5K395_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K395_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.380e-49 Identity = 112/183 (61.20%), Postives = 119/183 (65.03%), Query Frame = 1 Query: 1 SREKQLSETPGALLGASTAPSSTAIVSATAGGIEAVGASSSVDTTGDA---VAASAGVVTGVEWVEYWDESAGASYFFNTVTQEASWTNPHEAA----AGGG--AXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVWEKPAELSGKTETVSGVPQFDRPEE 522 SREKQL E G SS ++ GASSSV T +A V + G G EWVEYWDESAGASYFFNTVTQEASWTNP+E AGG A XXXXXXX ETLSQ EDGRAKWTECLDEASG+TYYYNVITGEAVWEKPAELS V GVPQFDRPE+ Sbjct: 91 SREKQLDEANGT--------SSAGALALVTNAATTSGASSSVATGAEAGGLVVSQGGGTAGAEWVEYWDESAGASYFFNTVTQEASWTNPNEGTESRVAGGAIVASEAGSGXXXXXXXRAAGPETLSQHEDGRAKWTECLDEASGSTYYYNVITGEAVWEKPAELSNMKGAVGGVPQFDRPED 265
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: D8LMB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB7_ECTSI) HSP 1 Score: 170 bits (430), Expect = 3.860e-45 Identity = 93/123 (75.61%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 172 GVEWVEYWDESAGASYFFNTVTQEASWTNPHEAA----AGGG--AXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVWEKPAELSGKTETVSGVPQFDRPEE 522 G EWVEYWDESAGASYFFNTVTQEASWTNP+E A AGG A XXXXXX ETLSQPEDGRAKWTECLDEASG+TYYYNVITGEAVWEKPAELS V GVPQFDRPE+ Sbjct: 1600 GSEWVEYWDESAGASYFFNTVTQEASWTNPNEGAESQVAGGAIVASEAGXXXXXXEGGRAAGPETLSQPEDGRAKWTECLDEASGSTYYYNVITGEAVWEKPAELSNMKSAVGGVPQFDRPED 1722
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A1W0A2M2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2M2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.310e-11 Identity = 44/112 (39.29%), Postives = 50/112 (44.64%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWTNPHEAAAG---------GGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAK------------WTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASYFFN TQEASWT P A A ET E+G+ + W + +DEASGA YYYN TGE W Sbjct: 1475 EWVEYWDENAQASYFFNIRTQEASWTKPGHTNAKDVAAQLLSYSSAISTQDYTQDNYGGYYKANETGYYDENGQYQXXXXXGGGNGDGWAQYIDEASGAAYYYNHYTGERYW 1586
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A6G0WDE5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.730e-10 Identity = 42/113 (37.17%), Postives = 49/113 (43.36%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAA-----------------GGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT NP++ A GA + DG W + DE SGA YYYN +TGE W Sbjct: 1157 EWVEYWDENAQASYYFNIRTQEASWTKPGNTNPNDVTAQLLSYSTALSAQDFQQDNYGAYQEGYKADYGYYDADGQYHYYDKANDG---WAQYTDEESGAAYYYNHVTGERYW 1266
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A485KAZ4_9STRA (Aste57867_4080 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAZ4_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.110e-9 Identity = 48/129 (37.21%), Postives = 53/129 (41.09%), Query Frame = 1 Query: 148 AASAGVVTGVEWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAAG------------------GGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAK-----WTECLDEASGATYYYNVITGEAVW 450 AA+A + EWVEYWDE+A ASY+FN TQEASWT NP AA GG E P G W + DEASGA YYYN TGE W Sbjct: 569 AAAAAIPAEDEWVEYWDENAQASYYFNIRTQEASWTKPGQTNPTLVAAQLLSYSTALSAQDYQQDNYGGYYGQDTTGYYDEAGQYHYYEEGKGPAPGATSQANDGWAQYTDEASGAAYYYNHFTGERYW 697
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A1V9YWV9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWV9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.240e-9 Identity = 41/113 (36.28%), Postives = 46/113 (40.71%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWTNPHEAAAGGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAK----------------------WTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT P A A G+A W + +DEASGA YYYN TGE W Sbjct: 1201 EWVEYWDENAQASYYFNIRTQEASWTRPGVMNAKDVAAQLLSYSNAISTQDYTADNYGGYDASGKATEYGFYDQAGVYHYYDEAGGNDGWAQYIDEASGAAYYYNHYTGERYW 1313
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: T0R5G3_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R5G3_SAPDV) HSP 1 Score: 67.4 bits (163), Expect = 1.680e-9 Identity = 43/115 (37.39%), Postives = 48/115 (41.74%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAA-------------------GGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT NP + AA GG G W + +DEASGA YYYN TGE W Sbjct: 1211 EWVEYWDENAQASYYFNIRTQEASWTKPGNTNPADVAAQLLSYSNAISTQDYTTENVGGYYSAATNEYGFYDEAGVYHYYDDGAAASGGDGWAQYVDEASGAAYYYNHYTGERYW 1325
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A397EW93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EW93_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.360e-9 Identity = 46/121 (38.02%), Postives = 50/121 (41.32%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAA-------------------------GGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT NP E AA G +T P DG W + DE SGA YYYN ITGE W Sbjct: 372 EWVEYWDENAQASYYFNIRTQEASWTKPGYTNPTEVAAQLLSYSTALTAHDFQQDNYGASYSPDKGDDVGYFDAGGHYHYYDTTNDTT--PNDG---WAQYKDEQSGAAYYYNHITGERYW 487
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A397EAS5_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EAS5_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.270e-9 Identity = 46/121 (38.02%), Postives = 50/121 (41.32%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAA-------------------------GGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT NP E AA G +T P DG W + DE SGA YYYN ITGE W Sbjct: 1560 EWVEYWDENAQASYYFNIRTQEASWTKPGYTNPTEVAAQLLSYSTALTAHDFQQDNYGASYSPDKGDDVGYFDAGGHYHYYDTTNDTT--PNDG---WAQYKDEQSGAAYYYNHITGERYW 1675
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Match: A0A3L6UR75_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UR75_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 8.340e-9 Identity = 45/121 (37.19%), Postives = 49/121 (40.50%), Query Frame = 1 Query: 178 EWVEYWDESAGASYFFNTVTQEASWT-----NPHEAAA-------------------------GGGAXXXXXXXXXXXXXXXXXQETLSQPEDGRAKWTECLDEASGATYYYNVITGEAVW 450 EWVEYWDE+A ASY+FN TQEASWT NP E AA G +T P DG W + DE SGA YYYN TGE W Sbjct: 214 EWVEYWDENAQASYYFNIRTQEASWTKPGYTNPTEVAAQLLSYSTALTAHDFQQDNYGASYSPDKGDDVGYFDAGGHYHYYDTTNDTT--PSDG---WAQYKDEQSGAAYYYNHFTGERYW 329 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7434.16324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7434.16324.1 >prot_L-elsbetiae_contig7434.16324.1 ID=prot_L-elsbetiae_contig7434.16324.1|Name=mRNA_L-elsbetiae_contig7434.16324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp SREKQLSETPGALLGASTAPSSTAIVSATAGGIEAVGASSSVDTTGDAVAback to top mRNA from alignment at L-elsbetiae_contig7434:5568..7059+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7434.16324.1 ID=mRNA_L-elsbetiae_contig7434.16324.1|Name=mRNA_L-elsbetiae_contig7434.16324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1492bp|location=Sequence derived from alignment at L-elsbetiae_contig7434:5568..7059+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7434:5568..7059+ >mRNA_L-elsbetiae_contig7434.16324.1 ID=mRNA_L-elsbetiae_contig7434.16324.1|Name=mRNA_L-elsbetiae_contig7434.16324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig7434:5568..7059+ (Laminarionema elsbetiae ELsaHSoW15)back to top |