mRNA_L-elsbetiae_contig7430.16322.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: D7G8M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M4_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.210e-55 Identity = 105/144 (72.92%), Postives = 113/144 (78.47%), Query Frame = 1 Query: 1 MAQRPISIASRAIRGALGVFLGVQTCSAFVAAPPALARSGGWAGVGRGGGFSATPSTAPGREGVSMVAAEASTGQKQLEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFHG 432 MA P S ASR + AL L VQ C AF+AA PALAR G WA +GR GG ++ ST V MVAAEA+ GQKQLE LKFLTPETARATKAAVGTPAYVYDAASL+ANAEACLAFP+AYGLTVRYAMKSLPNKAVLQLF G Sbjct: 1 MAPTPRSRASRVVAVALVASLSVQVCVAFLAAAPALARGGEWARLGRSGGSASASSTR-----VEMVAAEAAAGQKQLETLKFLTPETARATKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 139
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE) HSP 1 Score: 167 bits (423), Expect = 2.670e-46 Identity = 101/144 (70.14%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 1 MAQRPISIASRAIRGALGVFLGVQTCSAFVAAPPALARSGGWAGVGRGGGFSATPSTAPGREGVSMVAAEASTGQKQLEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFHG 432 MA P S ASR + AL L VQ C AF+ ALAR A +GR GGF++ ST V MVAAEA+ GQKQLE LKFLTPETARATKAAVGTPAYVYDAASL+ANAEACLAFP+AYGLTVRYAMKSLPNKAVLQLF G Sbjct: 84 MAPTPRSRASRLVAVALVASLTVQVCVAFLTTSSALARGRECARLGRSGGFASASSTR-----VEMVAAEAAVGQKQLETLKFLTPETARATKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQG 222
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A836CQQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQQ3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 7.530e-22 Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 196 MVAAEASTGQKQLEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFHG 432 MVAAE K LE+L+FLTPETA A ++ GTPAYVYD ASL+ANA CL+FP+A+GLTVR+AMKS PN AVLQLF+ Sbjct: 1 MVAAEPEVETK-LEQLRFLTPETAEAVRSTYGTPAYVYDVASLKANARECLSFPNAFGLTVRFAMKSCPNAAVLQLFNS 78
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A8G0V6J3_9BACT (Diaminopimelate decarboxylase n=1 Tax=Ruficoccus sp. ZRK36 TaxID=2866311 RepID=A0A8G0V6J3_9BACT) HSP 1 Score: 87.0 bits (214), Expect = 2.680e-17 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 232 LEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFH 429 +E LKFLTPE AR A GTP YVYD ASL+ +AEA LAFP+A+GLTVR+AMK+ PN A+L++FH Sbjct: 1 METLKFLTPELARQIAADYGTPVYVYDEASLKRHAEAALAFPNAFGLTVRFAMKASPNAAILRVFH 66
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.330e-17 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 232 LEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLF 426 +E LKFLTP++ARA + VGTPAY Y +L+ NA A LAFPHAYGLT R+AMKS PN A+LQLF Sbjct: 59 VETLKFLTPDSARAVRETVGTPAYAYHLPTLKENAAAVLAFPHAYGLTPRFAMKSCPNAAILQLF 123
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A7S1XR44_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR44_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.400e-16 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 232 LEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLF 426 +E L+FL PETAR A VGTPAYVY A L A+ LAFP+AYGLT RYAMKS PN A+LQLF Sbjct: 50 METLRFLNPETAREIAAKVGTPAYVYSEAELTTQAKTALAFPNAYGLTARYAMKSSPNAAILQLF 114
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A7S4A701_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A701_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.270e-16 Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 232 LEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFHG 432 LEKL+FL+ + R+ + GTP YVYDAA+L+A AE LAFP+AYGLTVRYAMK+ PN AVL+LF Sbjct: 56 LEKLRFLSNDDVRSVQQDFGTPTYVYDAATLKARAEEALAFPNAYGLTVRYAMKACPNGAVLKLFES 122
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A7R9Y6N3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6N3_9VIRI) HSP 1 Score: 82.8 bits (203), Expect = 9.820e-16 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 235 EKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFH 429 + L FLTPE A A + GTP++VYDA +LRA A+ LAFP+AYGLTVRYAMK+ PN A+L+LF+ Sbjct: 34 DTLGFLTPELAEAVRGCAGTPSFVYDATTLRAQAQKALAFPNAYGLTVRYAMKASPNAAILKLFN 98
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A7S0GTX5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GTX5_MICPS) HSP 1 Score: 82.8 bits (203), Expect = 1.040e-15 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 187 GVSMVAAEASTGQKQLEKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLF 426 GV VAA G +E L+FL PE A+A + A GTPAYVYD A L AE LAFP+A+GLTVRYAMK+ PN A+L++F Sbjct: 47 GVLQVAAA---GDAAVESLQFLKPEEAKAVRDAFGTPAYVYDLARLEEQAEKALAFPNAFGLTVRYAMKASPNAAILKVF 123
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Match: A0A842HDN3_9BACT (Diaminopimelate decarboxylase n=1 Tax=Ruficoccus amylovorans TaxID=1804625 RepID=A0A842HDN3_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 1.680e-15 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 235 EKLKFLTPETARATKAAVGTPAYVYDAASLRANAEACLAFPHAYGLTVRYAMKSLPNKAVLQLFH 429 E LKFLTPE+ R GTP YVYD A+L +AEA LAFP+A+GLTVR+AMK+ PN A+L++FH Sbjct: 4 ETLKFLTPESVRQIAEEFGTPVYVYDEAALTRHAEAALAFPNAFGLTVRFAMKAAPNAAILRVFH 68 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7430.16322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7430.16322.1 >prot_L-elsbetiae_contig7430.16322.1 ID=prot_L-elsbetiae_contig7430.16322.1|Name=mRNA_L-elsbetiae_contig7430.16322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp MAQRPISIASRAIRGALGVFLGVQTCSAFVAAPPALARSGGWAGVGRGGGback to top mRNA from alignment at L-elsbetiae_contig7430:6145..8845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7430.16322.1 ID=mRNA_L-elsbetiae_contig7430.16322.1|Name=mRNA_L-elsbetiae_contig7430.16322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2701bp|location=Sequence derived from alignment at L-elsbetiae_contig7430:6145..8845- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7430:6145..8845- >mRNA_L-elsbetiae_contig7430.16322.1 ID=mRNA_L-elsbetiae_contig7430.16322.1|Name=mRNA_L-elsbetiae_contig7430.16322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig7430:6145..8845- (Laminarionema elsbetiae ELsaHSoW15)back to top |