|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1066 |
| Cds size | 432 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816828.0002549-UTR-L-elsbetiae_contig743:24781..25254 | 1622816828.0002549-UTR-L-elsbetiae_contig743:24781..25254 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig743 24782..25254 + |
| 1691683844.2204554-UTR-L-elsbetiae_contig743:24781..25254 | 1691683844.2204554-UTR-L-elsbetiae_contig743:24781..25254 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig743 24782..25254 + |
| 1622816828.0329766-UTR-L-elsbetiae_contig743:27719..27880 | 1622816828.0329766-UTR-L-elsbetiae_contig743:27719..27880 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig743 27720..27880 + |
| 1691683844.2460887-UTR-L-elsbetiae_contig743:27719..27880 | 1691683844.2460887-UTR-L-elsbetiae_contig743:27719..27880 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig743 27720..27880 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816828.0106304-CDS-L-elsbetiae_contig743:25254..25501 | 1622816828.0106304-CDS-L-elsbetiae_contig743:25254..25501 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig743 25255..25501 + |
| 1691683844.2290337-CDS-L-elsbetiae_contig743:25254..25501 | 1691683844.2290337-CDS-L-elsbetiae_contig743:25254..25501 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig743 25255..25501 + |
| 1622816828.0202277-CDS-L-elsbetiae_contig743:27534..27719 | 1622816828.0202277-CDS-L-elsbetiae_contig743:27534..27719 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig743 27535..27719 + |
| 1691683844.2370465-CDS-L-elsbetiae_contig743:27534..27719 | 1691683844.2370465-CDS-L-elsbetiae_contig743:27534..27719 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig743 27535..27719 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig743.16321.1 >prot_L-elsbetiae_contig743.16321.1 ID=prot_L-elsbetiae_contig743.16321.1|Name=mRNA_L-elsbetiae_contig743.16321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
MAGMINLNSSRCRGRCRGQECNLTPYFGERGSTPAFCATHKKAGMVNLIS
KRCADESCDRIPSYNFDAVGAKATHCNSHKAKGMINVRHPRCANPTCKRQ
PSFGMAEEGKGRGKAVFCVAHRDPGMVDVKNNYRKKLKRKAGS* back to topmRNA from alignment at L-elsbetiae_contig743:24782..27880+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig743.16321.1 ID=mRNA_L-elsbetiae_contig743.16321.1|Name=mRNA_L-elsbetiae_contig743.16321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3099bp|location=Sequence derived from alignment at L-elsbetiae_contig743:24782..27880+ (Laminarionema elsbetiae ELsaHSoW15)
CTTGCTATATATAGGAAGATGTTCGTTTCCCTCGCACCGGATAGTGTGAC
CGAGCAGTAGGTCAATGGATTCGTGTATTATCGAGGAGGACAAAGAGAGA
GAGAGAGAGAGCTCGGGAGGCTATAACACAGAGTCAGAAATACCAAAAGG
AAGAACACCCACTAGACCGCCGAACCGACACATAACCGTCAATGCTGGAG
AGTCAACCGACAGAGAAAAAGGTGCGTGTAGATGCGAGCATAAACTTCGA
CTTTACCGTCGACGAGGGAAAGGGACGGCTGAACCCTTCTCGCGACAAAA
ATATTAGGCAGGCACCGCAGAATGGAGGAGTGGGGGTCTCGGGGAAAGGA
ACTCTTCTGTGTGACCACGGTCCAGTACTCTGGCAAAATAGTCCCTCGTC
GCGAAGAGCCCATCCAACACTGGATATGAATGTAAAGACGAAAAAATAAA
ATTAACCCGTCTCCCCTCCCGTAATGGCAGGCATGATCAACCTCAACAGC
TCGCGATGCAGGGGGCGATGCAGAGGGCAGGAGTGTAACCTGACGCCCTA
CTTCGGCGAACGTGGATCAACCCCGGCTTTCTGCGCGACGCACAAAAAGG
CGGGCATGGTTAACCTCATCAGCAAGCGGTGCGCGGACGAGTCTTGCGAC
CGAATCCCGTCCTACAACTTCGATGCGGTGGGCGCCAAGGCGACCCACTG
CAACAGCCACAAAGCCAAAGGTGGGGGGGCGCCAGGCCGCGTGTTTTCAT
CGATGCCCAACAGCAGTGTACCTTACGAAAGTTGCAGCATCGTTCACCCG
ACAGAAGCATAACGTAGGCGACACACAAGATACCACACCCCCTGCACTGA
CCTTTAGAGCTTCATTACTTCGTAACGAAGAGGGTGCCAGCATCAAACGA
CACATTTTCGGACAGCCCTCGACTAGATCTTTCCAACGCCACCCCATTTC
GGCACTTGCACTCTTCTTCTTGCTGGGGAGGAATCGACTTTTGAAAATCT
GTCCACGGGGGGCGGGGGGTGTTATCTTGTGTCACAAACGGTAGTTGTCG
CTCTTGGGGCTCCAGGTGGTATGCCTCGACGTACTCGTGTTGTCGAGTTT
CTCGGTAATCCCTTTTTGTGGGCGGTGTCTGTTCCCCTCGGGAACGTGAA
AGCTCGGCTTAGTTGTAAGCAGGTCTGCAACCACGGGAACACCGGTACTC
TCCTCGCCATGCCATCATGTACTTACTGGACACGCTTTCATCGAACGACC
TTGTTGCTGGTTTCCATTAAACAGTTTGGTGGCGCACGCATCAGCCCCAC
GGAAGATACCGTTCCAGATTGTTCGCCCACCAAGGATGGATGGCGTGCGT
GCGTTGCCCGTCGCCTCTTTTTCGCTATTTTGTTTTTGGGCTCATGGCGG
GCTACATACACAGGGCCTGAGTTGATATGCGTGCACGTTTGTTTTGCATA
AATGGGCTTCTTGAGCATACCACAAGGACGAGTTATGCTCGAAAAAATGG
CCATTTCTGCTCGACTTATGCACGGATTAGCCTAAAACGCGATAGTTGTG
ATTGTTTCTTGTGCACATAACGAAATTTATTCCAAAACAGCAAAACGGGC
AAAAAAGCAAAAAAAATAACTTGGACCGGAAAAAGGGCTCAGTATGCCTA
CAACAGTCCCTCTGGAACGAATTCTTCGCCGACTGGACGTCGACTGCTGA
CACTTGTACTATACATTAATTTAAAAATAAATAAAACAAGCATATCAGGT
CAGGCCCTATCGCGGGCGGCCCAGTCTCCTCTCCCAGCTCCATGCGTGTT
TTTTTAAACAAAATACCAAGGTAGGTGTGAAAAGGATCAAACGTCTTCGA
CAGACTGTAGGAGGTTTATGTCCCTTAGAAGGGTGACCACCACATTGCCC
TCCCCTTTTTTGAGTCTTCTTCTTGGTTGCTAGGCAAGAGAAGTTTTTTT
TTAGGGTAACCGGAACCCGACCGGCTGGCGGCGAAGCGTTTTTATCCCAC
TTTTTCACATATCCTCTGAGCGTGTTTTTCCACACGTTTTCTTCATGTTC
AACGGGTGCGCTACGTCCGCCACGTCTCAAAAGTTCCGCAGTTCGATAAC
CGTTTTCGTTTCGATCCCCCATCATATTGTTTCTCTATTTTATTCATGGA
GAGAAACGTTCTTTGACTTTTACATTCCAGAAAGAGAAATCGTGAGGATG
AGATTCGAACTCGGGACTTTGTCCACCGAAAACTAGCATCTCTTCGCGAC
GCCAAATGTGAAAAGGGCCAAACGTCTTCGACAGACTGTAGGGGGTTTAT
GTCCCTTATAAGGGTATCAGTCAGACTCTCTTTTTTGTATTCTCTGTGTG
CTTTGCCCGGGACGCTCGGTCGGTGGTGGTAGGAGTTATCTGCGTGGTAT
GTCGTTCTCTGACGCGGCATCGGGTCCATTTTTATTTTCGTAACCTTCTT
AAGGAATAAGGTAGCGTGTGGCCACGGGAATTGACCGCATGAAGCGTTGT
AATAATACAGACATTTGTTTAGGGTAAGTTATCCTGCGACCACGGGAATC
GACCGCGTCAGTATTGGATTAGTACAGACTCAGAGAGGTGTACGGATAGA
GATATCGAAACGGTGTTTAATGCGAAGACAGCACACACACACGCAATAGG
GAGGTACTAGAGAGATCGGAATGATTTTTAATGTGAGGGCAACAACAACC
ACACTCCCTGTGCTGCGTTTCTGCCTCTTCTGACGCGGCATCCCTGTGTG
CAGGCATGATCAACGTCCGGCACCCTCGGTGTGCTAACCCGACCTGCAAG
CGGCAGCCCTCGTTCGGCATGGCCGAGGAGGGGAAAGGAAGGGGCAAAGC
GGTGTTCTGTGTGGCGCACAGAGATCCCGGGATGGTGGACGTGAAGAACA
ACTACCGGAAGAAATTGAAGAGGAAGGCAGGCTCGTAGCCCCGAGTGGGC
TAGGCTGCGCTAGGTTCGGCTAGGCTGCTACATACGTACCGCTACCATGG
CAAAAGTACCGGCGTTAGCAAAACAGAAAAAATTGACATAAGTCTGCTGT
CGAAAGATTATGGATACGTACGTTAGAGCGTTCGGCAGTATGGGGAACG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig743:24782..27880+ >mRNA_L-elsbetiae_contig743.16321.1 ID=mRNA_L-elsbetiae_contig743.16321.1|Name=mRNA_L-elsbetiae_contig743.16321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig743:24782..27880+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGGCATGATCAACCTCAACAGCTCGCGATGCAGGGGGCGATGCAG
AGGGCAGGAGTGTAACCTGACGCCCTACTTCGGCGAACGTGGATCAACCC
CGGCTTTCTGCGCGACGCACAAAAAGGCGGGCATGGTTAACCTCATCAGC
AAGCGGTGCGCGGACGAGTCTTGCGACCGAATCCCGTCCTACAACTTCGA
TGCGGTGGGCGCCAAGGCGACCCACTGCAACAGCCACAAAGCCAAAGATG
GCAGGCATGATCAACCTCAACAGCTCGCGATGCAGGGGGCGATGCAGAGG
GCAGGAGTGTAACCTGACGCCCTACTTCGGCGAACGTGGATCAACCCCGG
CTTTCTGCGCGACGCACAAAAAGGCGGGCATGGTTAACCTCATCAGCAAG
CGGTGCGCGGACGAGTCTTGCGACCGAATCCCGTCCTACAACTTCGATGC
GGTGGGCGCCAAGGCGACCCACTGCAACAGCCACAAAGCCAAAGGCATGA
TCAACGTCCGGCACCCTCGGTGTGCTAACCCGACCTGCAAGCGGCAGCCC
TCGTTCGGCATGGCCGAGGAGGGGAAAGGAAGGGGCAAAGCGGTGTTCTG
TGTGGCGCACAGAGATCCCGGGATGGTGGACGTGAAGAACAACTACCGGA
AGAAATTGAAGAGGAAGGCAGGCTCGTAGGCATGATCAACGTCCGGCACC
CTCGGTGTGCTAACCCGACCTGCAAGCGGCAGCCCTCGTTCGGCATGGCC
GAGGAGGGGAAAGGAAGGGGCAAAGCGGTGTTCTGTGTGGCGCACAGAGA
TCCCGGGATGGTGGACGTGAAGAACAACTACCGGAAGAAATTGAAGAGGA
AGGCAGGCTCGTAG back to top
|