mRNA_L-elsbetiae_contig7420.16302.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A6H5KMS3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMS3_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.780e-80 Identity = 171/256 (66.80%), Postives = 187/256 (73.05%), Query Frame = 1 Query: 1 MKYTAGLFSVALATLSPSRDVGALGFVA----------PVATPSLPRTAAAAAASHGHQRRGSRSTGSV--SRALGVCRRRVMWTALGSASSPGDGIDDGXXXXXXXXXXXXXXXXXXXXGDIPSD-QESKLDSLASLVERTFVLAAAGNSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRAHEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 MK L S ++ TLSPSRD GALGFV P T R H H S+GS+ SR G R R + ALG SSP DG DD XXXXXXXXXXXXXXXXXXXX +E++ SLASLVE TFVLAAAGNSY+MG+KAFISTIKEAYE+GYTVPALTMEVSFVPTKTAGRDLH DEVELRS+WIALVYLTLE ANWPQKVQRAHEISAPFMDRF+EFV+KVM+ AA GHTLQTLK+ Sbjct: 1 MKCVTFLLSASIVTLSPSRDGGALGFVLGPGLAMRRGKPTTTHDRRRMC------HHHGLASPSSSGSICDSRTSGGARWRTIPRALGGTSSPSDGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAEQQSLASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEVSFVPTKTAGRDLHPDEVELRSVWIALVYLTLENANWPQKVQRAHEISAPFMDRFAEFVKKVMNGAASGHTLQTLKL 250
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A836CF30_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF30_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.980e-35 Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 337 SDQESKLDSLASLVERTFVLAAAGNSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRAHEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 S +S LAS+VER+FV+A + Y G++AFIS I +AYE G+ VP L+ME+ +AGR L +EVELR++W+ LVYLTLE+A WPQ+V RA ISAPF + F FV +M A + G+ L LK+ Sbjct: 66 SSPQSSAADLASIVERSFVVACSEGDYTRGLQAFISAIMKAYESGFAVPTLSMEIGMCGNNSAGRPLMAEEVELRTVWMTLVYLTLERARWPQRVPRAAGISAPFKNEFDPFVGNIMRAHSSGYDLNRLKL 196
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A7S2CCD5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CCD5_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 8.640e-20 Identity = 48/128 (37.50%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 364 LASLVERTFVLAAAG---NSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRA---HEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 L +E TFV AA+G +Y+ G+ F+ ++AY++G VPAL +E+S TAGR L DE+ELR++W++LVYLT E+ + K A ++A +F F +++A +G+ L TLK+ Sbjct: 71 LTLAIESTFVQAASGMGGTNYEFGLMEFVRATRDAYDEGIMVPALNLELSMCQQYTAGRPLQADEIELRTVWLSLVYLTFERVGYESKSTEAFPGQSVAADLRHKFYTFTYDIVNAKKQGYDLATLKL 198
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A8J2WDQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WDQ0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.690e-18 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 364 LASLVERTFVLAAA--GNSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRAHEISAP--FMDRFSEFVQKVMDAAAKGHTLQTLKV 729 +A ++E TFV A Y +K FI+ AYE+G+TV AL++E++ P +TAGR L Q+EVELRS+W++LVYLTL + + S P +F FV V++AA G+TL++LK+ Sbjct: 61 VAQILEVTFVNACMQLATGYVDTLKLFIAAALTAYERGFTVNALSLELAQCPQQTAGRPLMQEEVELRSVWLSLVYLTLANVRHESEASESVGASVPAEIRSQFQTFVYDVVNAAQGGYTLESLKL 186
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A7S3B6A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B6A2_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 6.660e-17 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 376 VERTFVLAAAGNS---YQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQR--AHEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 +E TFV AA+G + Y+ + FI ++AY++G TVPAL +E+S TAGR L +E++LRS+W++LVYLT E+ + ++A +F F +++A +G+ L LK+ Sbjct: 72 IEATFVQAASGANGANYEFSLMEFIRATRDAYDEGITVPALNLELSMCKQYTAGRPLQPEEIDLRSVWLSLVYLTFERVGYASSTGTFPGESVAADLRQKFYTFTYDIVNAKKQGYDLAGLKL 194
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A7S0F2H4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F2H4_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 1.230e-16 Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 334 PSDQESKLDSLASLVERTFVLAAAGNS---YQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRA---HEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 P D +E FV AA+G S Y+ G+ FI ++AY++G VPAL +E+S TAGR L DE+ELR++W++LVYLT E+ + K ++ +F F +++A +G L LK+ Sbjct: 78 PKDAGPPASPTTLAIEAAFVQAASGMSGANYEFGLMEFIRATRDAYDEGVMVPALNLELSMCQQYTAGRPLQSDEIELRTVWLSLVYLTFERVGYESKSTGGFLGQSVAEDLRQKFYTFTYDIVNAKKQGFDLAGLKL 215
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A0G4EGE9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGE9_VITBC) HSP 1 Score: 80.5 bits (197), Expect = 2.550e-14 Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 364 LASLVERTFVLAAAGNS--YQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDL-------------------------------HQDEVELRSIWIALVYLTLEKANWPQKVQRAHEISAPFMDRFSEFVQKVMDAAAKGHTLQTLKV 729 +A +E+ F+ A + YQ ++ FI + AYEKG+ +PAL +EVS V + R L DE ELR+IW++L++LTL+ WPQ + ++S F ++FS FV V++A +G L+ LK+ Sbjct: 14 VAEAIEKAFIAACSRTDLDYQETLRQFIRPVITAYEKGFNMPALLLEVSTVDKPSIERPLMVGEVTWVTDVPASLTRVHDRLFAFLCHGLCQPDEAELRTIWMSLIFLTLQTVGWPQLRESPSQLSISFEEKFSPFVANVVEAHRRGFDLRRLKL 168
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A7S3ADU1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADU1_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 2.470e-12 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 328 DIPSDQESKLDSLASLVERTFVLAAAGNSYQM--GIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTLEKANWPQKVQRAHEISAPF-MDRFSEFVQKVMDAAAKGHTLQTLKV 729 D + K S A ++E TFV A S +K FI ++K A+ G T+PA+ E+S +TAGR L +EVELRS+W+ LV LTLE + A E P + +++EFV+ V+ A +G L+ LK+ Sbjct: 25 DAAAGAPPKPPSPAEMIECTFVRACMDLSTGQVDTLKLFIVSVKAAFLNGATIPAVERELSECAQETAGRALLPEEVELRSLWLCLVSLTLEAIG---RGGTADEAGVPSEICKYAEFVRNVVGAKERGAELKALKL 158
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: A0A7S3QAJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAJ5_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.340e-9 Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1 Query: 358 DSLASLVERTFVLAA--AGNSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAGRDLHQDEVELRSIWIALVYLTL 594 D +A ++E TF+ A Y +K F+++ AYE+ +PAL V P TAGRDL Q E+E+R +WI + YLTL Sbjct: 98 DKIAEMIEVTFIKACFQLATGYVDVLKLFLASTSAAYERKIALPALIQSVDDCPANTAGRDLSQQELEVRQMWIMICYLTL 178
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Match: M1VI40_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VI40_CYAM1) HSP 1 Score: 63.5 bits (153), Expect = 3.440e-8 Identity = 43/155 (27.74%), Postives = 75/155 (48.39%), Query Frame = 1 Query: 343 QESKLDSLASLVERTFV---LAAAGNSYQMGIKAFISTIKEAYEKGYTVPALTMEVSFVPTKTAG-----------RDLHQDEVELRSIWIALVYLTLEKANWP----------QKVQRAHEISAPFM--DRFSEFVQKVMDAAAKGHTLQTLKV 729 + ++ +A + F+ L +G Y +++FI++ AY GY++ AL +E+ V ++ R L DEVELR+IW+ LV+ L N+P ++ R I+ F D+F FVQ ++DAA G+ L +++ Sbjct: 95 ENDDVNGVAGAIHEAFLNACLPQSGVPYVAALRSFIASTVRAYRLGYSLDALEIELRRVGAESLRSGNRSASGELPRPLEADEVELRTIWLTLVFKVLRYVNFPRDRMPPEAPSEQSSRNRAITEEFRVPDQFDRFVQSIVDAARAGYDLARIRL 249 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7420.16302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7420.16302.1 >prot_L-elsbetiae_contig7420.16302.1 ID=prot_L-elsbetiae_contig7420.16302.1|Name=mRNA_L-elsbetiae_contig7420.16302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MKYTAGLFSVALATLSPSRDVGALGFVAPVATPSLPRTAAAAAASHGHQRback to top mRNA from alignment at L-elsbetiae_contig7420:3375..9155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7420.16302.1 ID=mRNA_L-elsbetiae_contig7420.16302.1|Name=mRNA_L-elsbetiae_contig7420.16302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5781bp|location=Sequence derived from alignment at L-elsbetiae_contig7420:3375..9155+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7420:3375..9155+ >mRNA_L-elsbetiae_contig7420.16302.1 ID=mRNA_L-elsbetiae_contig7420.16302.1|Name=mRNA_L-elsbetiae_contig7420.16302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig7420:3375..9155+ (Laminarionema elsbetiae ELsaHSoW15)back to top |