mRNA_L-elsbetiae_contig741.16292.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 476 bits (1225), Expect = 5.010e-165 Identity = 243/297 (81.82%), Postives = 264/297 (88.89%), Query Frame = 1 Query: 61 LSLTLAGLLVALSRKADGFAVPVKLSSRSRGCLGAGEASAAPAGSSAEDRTGDFPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAIVKERA 951 L L LAG+L + KADGFA P+K+S R G EA + S+A +T D PQALIFDCDGVLADTERDGHRPAFN+AFKIKNLDCEW VE YGKLLSVGGGKERMTAHWDEVGWPDCA+TA+ERS+LVKELHLLKTALFNQAVVDG IPLR GVIRLVDEAIY+KVPLAVCSTSNDKAVTNLVKTLMGKERLER++IFAGD+VEKKKPNPDIY+LAKDTMGLDP V+VIEDSHIGLTAAKAAGMNCLVTKSSYT DEDFSAAD+VT ELGEDGEA+ SVTLATLGAI++ERA Sbjct: 2 LGLALAGVLAIICGKADGFASPIKMSHRWSGSTSPLEA--VESSSTAGGQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAILRERA 296
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.130e-107 Identity = 162/221 (73.30%), Postives = 183/221 (82.81%), Query Frame = 1 Query: 229 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGED 891 A++FDCDGVLADTERDGHR AFN AFK NLD EW VE YG+LLSVGGGKERMTAHW++VGWP E+ E R LVK LHL KT LFN+ + +G IPLR GV+R+VDEAI VPL VCSTSNDKAVTNLV TLMG ER +I+IFAGDVVEKKKP+PD+Y LAK+TMGLD G MVIEDSHIGL AAK AGMNCLVTKSSYTA+EDFS AD++ ELG++ Sbjct: 53 AILFDCDGVLADTERDGHRVAFNTAFKENNLDTEWSVELYGELLSVGGGKERMTAHWNKVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYTANEDFSVADKIVEELGDE 273
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 324 bits (831), Expect = 9.770e-106 Identity = 166/240 (69.17%), Postives = 188/240 (78.33%), Query Frame = 1 Query: 220 FPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAIV 939 PQALIFDCDGVLADTERDGHRPAFN AFK K +DC WDV+ YGKLL VGGGKERMTAHWD+VGWP ++ LV+ELHLLKT LFN+A+V G IPLR GV+RLVDEAI ++VPLAVCSTSN++AV+NLV TLMG+ER ER RIFAGDVV KKP PDIYNLA + + L P V+V+EDS IGL AAK AGM CLVTKSSYT E+FS AD V VE +DG+ V L LG IV Sbjct: 29 LPQALIFDCDGVLADTERDGHRPAFNEAFKAKGIDCVWDVDLYGKLLEVGGGKERMTAHWDKVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYTGGENFSLADEV-VESLDDGD----VDLQVLGNIV 263
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 313 bits (801), Expect = 5.440e-101 Identity = 157/236 (66.53%), Postives = 182/236 (77.12%), Query Frame = 1 Query: 229 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAI 936 AL+FDCDGVLADTERDGHRP FN AFK K +DC WDV YG LL VGGGKERMTAHW++VGWP ++ +R LV+ELH+LKT LF + +G +PLR GV+R+VD AI VPL VCSTSNDKAV L++ LMG+ER+ +IFAGDVV KKKP PDIY LAK+ MGLD +VIEDSHIGLTAAKAAGM CLVTKSSYTA+EDF AADRV ELG+D EA V+ L A+ Sbjct: 53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD-EAGGGVSFKDLEAL 287
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A7R9WSC9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSC9_9STRA) HSP 1 Score: 300 bits (769), Expect = 9.400e-96 Identity = 160/289 (55.36%), Postives = 205/289 (70.93%), Query Frame = 1 Query: 64 SLTLAGLLVALS-RKADGFAVPVKLSSRSRGCLGAGEASAAPAGSSAEDRTGDFPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATL 927 S+T+A + +A S FA+ + S RS G A AG++A + +A+++D DGVLADTERD HRPAFN AF+ NL+ +WDVERYGKLL VGGGKERMTAHW+EVGWP ++R VKELHL KT +F + G +PLR GV+R++D+AI + LAVCSTSN+KAV NLV+TLMG +R + +IFAGD+V+KKKP PD+YNLA DTMGLD +++EDSHIGL AA AAG+ C+VTKSSYTA EDF+ A+++ ELG+D AA VTL L Sbjct: 40 SITIAAIALAGSIGSVQAFAISKQQSHRSTG---------ARAGTTALNAE---LEAILWDMDGVLADTERDAHRPAFNIAFEENNLNTDWDVERYGKLLEVGGGKERMTAHWNEVGWPQGFPEGDDRPAKVKELHLRKTDIFMDMIKTGGVPLRPGVLRIIDDAIAADLRLAVCSTSNEKAVRNLVQTLMGPDRAAKFQIFAGDMVQKKKPAPDVYNLAVDTMGLDKSKCVIVEDSHIGLGAAMAAGIACIVTKSSYTAGEDFTGANKIVEELGDD--AATGVTLENL 314
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 298 bits (762), Expect = 3.950e-95 Identity = 152/242 (62.81%), Postives = 183/242 (75.62%), Query Frame = 1 Query: 223 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSM--LVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAIVK 942 P+A++FDCDGVLADTERDGHRPAFNA F+ + LD +W E YG+LL VGGGKERMTAHW+EVGWP ++ S LVKELHL KT FN+ + G IPLR+GV+RLVDEAI V LAVCSTSN+KAV NLV TLMG+ER + + F GD+V+KKKP PD+Y +AKD+MGLD ++IEDS IGL AAKA+GM CLVTKSSYT +EDFS AD V L +DG +VTL LG I++ Sbjct: 48 PEAILFDCDGVLADTERDGHRPAFNAVFEERRLDTDWTPELYGRLLEVGGGKERMTAHWNEVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYTENEDFSKADCVVSSL-DDG----NVTLEKLGNILE 284
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV) HSP 1 Score: 297 bits (761), Expect = 4.570e-95 Identity = 148/241 (61.41%), Postives = 180/241 (74.69%), Query Frame = 1 Query: 223 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEE-RSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAIVK 942 P+A++FDCDGVLADTERDGHRPAFN AF +D EW VERYG LL VGGGKERMTAHW+EVGWP EE R VKELHL KT +F + +G IPLR GV+RLVDEAI V LA CSTSNDKAV NL+ TLMG +R + ++FAGD+V+ KKP PD+YN+A + MGLD +++ED+ IGL AAKAAG+ CLVTKS+Y EDF+ AD + ELG+D E VTLATLG++++ Sbjct: 45 PEAILFDCDGVLADTERDGHRPAFNRAFAENQIDEEWGVERYGVLLEVGGGKERMTAHWNEVGWPSAMPDDEEGRQAKVKELHLQKTGIFMDMINEGAIPLRPGVLRLVDEAIENGVRLACCSTSNDKAVKNLIATLMGPDRAAKFQVFAGDMVKAKKPAPDVYNMAVEEMGLDKSKCVIVEDTDIGLGAAKAAGIKCLVTKSAYAEKEDFTGADLIVDELGDDPET--GVTLATLGSLLE 283
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A0G4EGM7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGM7_VITBC) HSP 1 Score: 293 bits (751), Expect = 3.570e-93 Identity = 147/224 (65.62%), Postives = 168/224 (75.00%), Query Frame = 1 Query: 223 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEV--GWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGE 888 P ++FDCDGVLADTERD HRPAFN AF+ K D W V+ YG LL VGGGKERMTA+W+E GWPD T EE++ LVKELHL KTA+FN + G +PLR GV R+VDEAI PLAVCSTS+DKAVTNLV L+G +R R RIFAGD+V KKKP+PDIY LA M LDP +VIEDS IGL AAKAAGM C+VTKSSYT +EDFS AD V ELG+ Sbjct: 68 PFPILFDCDGVLADTERDAHRPAFNQAFREKGFDDVWGVDLYGHLLEVGGGKERMTAYWNEKEGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYTQNEDFSGADMVIAELGD 291
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: B5YPA5_THAPS (Possibly a phosphatase from the CbbY protein family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YPA5_THAPS) HSP 1 Score: 292 bits (747), Expect = 4.330e-93 Identity = 148/238 (62.18%), Postives = 184/238 (77.31%), Query Frame = 1 Query: 226 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCAETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASVTLATLGAIV 939 +A++FDCDGVLADTERDGHR AFN AF++ ++D W +RYGKLL VGGGKERMTAHW+EVGWPD A + R+ V LHL KT +F + +G IPLR GV+RLVDEAI V LAVCSTSN+KAV+NLV TLMG ER + +IFAGD+V+KKKP PD+Y +A DTMGLD ++IEDSHIG+ AA A+G++CLVTKSSYTA EDF+ A ++ ELG+D AA VTL TL +++ Sbjct: 39 EAILFDCDGVLADTERDGHRLAFNRAFQLNSIDESWSEQRYGKLLEVGGGKERMTAHWNEVGWPD-AIPEDGRAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELGDD--AATGVTLDTLASLL 273
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Match: A0A6V2Q9B2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q9B2_9STRA) HSP 1 Score: 289 bits (740), Expect = 5.980e-92 Identity = 146/236 (61.86%), Postives = 177/236 (75.00%), Query Frame = 1 Query: 226 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWDVERYGKLLSVGGGKERMTAHWDEVGWPDCA-ETAEERSMLVKELHLLKTALFNQAVVDGNIPLRKGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIRIFAGDVVEKKKPNPDIYNLAKDTMGLDPGLVMVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADRVTVELGEDGEAAASV-TLATL 927 +A++FDCDGVLADTERDGHR AFN AF +D W ERYG LL VGGGKERMTAHW+EVGWP E+ +ER+ VK+LHL KT +F + +G IPLR GV+RLVDEAI V LAVCSTSNDKAV+NLV TLMG ER + +IFAGD+V+ KKP PD+YN+A D M LD +++ED+HIGL+AAKAAG+ C VTKSSYT EDF+ AD + ELG+D E + TLA+L Sbjct: 43 EAILFDCDGVLADTERDGHRIAFNRAFANNGIDENWSEERYGVLLEVGGGKERMTAHWNEVGWPSVMPESPDERAAQVKKLHLEKTDIFMDLIDEGVIPLRPGVLRLVDEAIEAGVRLAVCSTSNDKAVSNLVSTLMGPERAAKFQIFAGDMVKAKKPAPDVYNMAVDEMKLDKSRCVIVEDTHIGLSAAKAAGIKCCVTKSSYTGGEDFTGADLIVEELGDDKEGGVTAETLASL 278 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig741.16292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig741.16292.1 >prot_L-elsbetiae_contig741.16292.1 ID=prot_L-elsbetiae_contig741.16292.1|Name=mRNA_L-elsbetiae_contig741.16292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MLRFKSLSLTLAGLLVALSRKADGFAVPVKLSSRSRGCLGAGEASAAPAGback to top mRNA from alignment at L-elsbetiae_contig741:4882..11906+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig741.16292.1 ID=mRNA_L-elsbetiae_contig741.16292.1|Name=mRNA_L-elsbetiae_contig741.16292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7025bp|location=Sequence derived from alignment at L-elsbetiae_contig741:4882..11906+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig741:4882..11906+ >mRNA_L-elsbetiae_contig741.16292.1 ID=mRNA_L-elsbetiae_contig741.16292.1|Name=mRNA_L-elsbetiae_contig741.16292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig741:4882..11906+ (Laminarionema elsbetiae ELsaHSoW15)back to top |