mRNA_L-elsbetiae_contig7401.16288.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7401.16288.1
Unique NamemRNA_L-elsbetiae_contig7401.16288.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 612 bits (1578), Expect = 4.430e-210
Identity = 327/474 (68.99%), Postives = 364/474 (76.79%), Query Frame = 1
Query:    7 DVTVSDVKVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGS-VASAKAFMQSYELEQTANDDAEFREVREWQKLFHDLIEGVMAGEAEDGGAS--VADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            DVT+ D K S +VR HAAAN+A DE+FYRLGYWVATHP LTLLLNL FV LCSIGFVNF IVTDG                         SDYALLL+ESA+EGGNVLTK SVD LWDLN+RVM +ETESGNTYT+LCT  ADGV+C+QP RGITRFWGNDFD YE++  +DADVLAA+++  YPDGQAV LE+VFGNSL     GS V SA  FMQSYELE TANDD EF EVR+W+ LFH+L+EG+M  E EDGG    V   F LRYFTGRS+DDALAASVSGETFLF ITYT M+VFIT+ LGKCG G VRRRSWLG+AGV  I+SAGVAAYGLNSAF VPFTTLSQ+LPFIL+GIGVDDMIVIVSSFD TDPALPVERR+A A+KRCGVSITYTSMTN  AFMLGS TSLPAV                   TAF ACLA+DANRQKAG+MDWLCC K  +RY  L ++
Sbjct:   21 DVTLED-KRSWFVRTHAAANQAADERFYRLGYWVATHPTLTLLLNLVFVALCSIGFVNFTIVTDG-------------------------SDYALLLLESAVEGGNVLTKASVDMLWDLNSRVMLVETESGNTYTDLCTTDADGVTCKQPFRGITRFWGNDFDIYEAAATSDADVLAAINMDTYPDGQAVSLEAVFGNSLTYDATGSSVVSAGVFMQSYELELTANDDEEFWEVRQWESLFHELVEGIME-EQEDGGGDDDVGAIFNLRYFTGRSIDDALAASVSGETFLFGITYTTMIVFITVILGKCGEGPVRRRSWLGVAGVGFIISAGVAAYGLNSAFGVPFTTLSQVLPFILVGIGVDDMIVIVSSFDHTDPALPVERRIADALKRCGVSITYTSMTNVAAFMLGSTTSLPAV-------------------TAFAACLAIDANRQKAGKMDWLCCLKAGARYTALQED 448          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 2.040e-169
Identity = 261/466 (56.01%), Postives = 335/466 (71.89%), Query Frame = 1
Query:   28 KVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTK-QHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFRE-VREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            K S W R+H   N   D  FYRLGYWVATHPK TLL++L FV+ C  GF NF+I  DGE LWVPA+SL K Q ++IIQ + D+G +YA  L+ES    G+VLTK+SVD +W+L+A VMA+E   GNTY ++C    DGV+C  P RGITRFWG DFD YE+SV +DAD+LAAV+V  +PDG  V   ++FGN +     G+++ A A MQ+Y L    ++D +  + V +W   F D +E V     +D      D   + Y T RS DDAL  SV+GE FLF+ TY +MV F+++ +G+C  G V++RSWLG+ GV ++++AG+AAYGLNS F +PFT+LSQILPFIL+GIGVDDM VIV+++D TDP+L VE RVAL VKRCGVS+TYTS+TNFFAF+LGS TSLPAVEYFCLYA TAILFDF +Q+TAFVA L MDANRQKAG++DW CCF       E +++
Sbjct:   23 KGSAWARLHGRINEVADNFFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRIEADGEDLWVPADSLAKDQQDIIIQDFDDDG-EYAAFLVESP--SGSVLTKESVDAIWELDAIVMAVEA-GGNTYVDVCPKELDGVTCEPPFRGITRFWG-DFDTYEASVTSDADILAAVNVATFPDGSTVNQLALFGNGITYDADGNISGASATMQAYALGSDPDEDTDLNDDVFDWNGAFQDAMEEV----TDDF-----DVVDVYYLTSRSTDDALEESVTGEIFLFITTYVLMVAFVSVAIGRCCTGPVKQRSWLGIGGVMLVIAAGMAAYGLNSGFDIPFTSLSQILPFILVGIGVDDMFVIVAAYDHTDPSLAVEERVALGVKRCGVSVTYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDWCCCFTSKKYLQEQERQ 474          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 1.090e-153
Identity = 252/495 (50.91%), Postives = 328/495 (66.26%), Query Frame = 1
Query:   25 VKVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFRE-VREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVIT-----------------------------YTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            +K S W R H   N   +  FYRLGY VAT+PK TLL++LAFVV C  GF NF I  DGE LWVPA+SL + H+ I+   FD   ++A  L+ES  E G+VLTK+SVD +W+L+A V A+E   GNTY ++C    DGV+C    RGITRFWG DF  YE+SV +DAD+LA V+V  +PDG  V  +++FGN +     G+++ A+A +Q + L+   +D A+  E V +W + F D +         D  A+  D F + Y T RS DDAL  SV+GE FLF+IT                             Y +M+  +++ LG+C +G V+RRSWLG+ G  ++ +AG+AAYGLNS F +PFT+LSQILPFILIGIGVDDM VIV+++D TDP+L VE R+AL VKRCGVS+TYTS+TNFFAF+LGS TSLPAVEYFCLYA TAILFDF +Q+TAFVA L MDANRQKAG++D  CC    S+    ++E
Sbjct:   19 LKGSSWSRFHGRINEVANNFFYRLGYRVATNPKRTLLISLAFVVACCFGFANFTIEADGEDLWVPADSLARDHQSIVLEDFDGDGEFASFLVESPSETGSVLTKESVDAIWELDAIVRAVEV-GGNTYADVCGKELDGVTCEPVFRGITRFWG-DFATYEASVTSDADILATVNVATFPDGSTVNQQALFGNGITYDDDGNISGARATIQGFALDSDPDDGADINEDVFDWNEAFQDAM---------DEAANNFDVFDVFYLTSRSTDDALNESVTGEMFLFIITCEEIVTSYKWLSKNFSQPSFAADAIALRAYVLMIAVVSVALGRCCSGPVKRRSWLGVGGTVLVAAAGLAAYGLNSGFHIPFTSLSQILPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFLLGSMTSLPAVEYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKID--CCXXLTSKKYLQEQE 500          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 1.630e-153
Identity = 246/463 (53.13%), Postives = 320/463 (69.11%), Query Frame = 1
Query:   34 SGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFRE-VREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            S W R H   N   D  FYRLGYWVATHPK TLL++L  V+ C  GF NF+                      I+G  D+G +YA  L+ES  E G+VLTK+SVD +W+L+A VMA+E + GNTY +LC+   DG +C    RGITRFWG DF  YE+SV +DAD+LAAV+VT +PDG AV  +++FGN +     G+++ A+A +Q Y L    +D A+  + V +W + FHD ++     EA D      D   + Y T RS +DAL  +VSGE FLF+ TY +MV F+++ +G+C +G V+RRSWLG+ GV ++V+AG+AAYG+NS F +PFT LS+ILPFILIGIGVDDM VIV+++D TDP+L VE R+AL VKRCGVS+TYTS+TNFFAFMLGS +SLPAVEYFCLYAGTAILFDF +Q+TAFVA L MDANRQKAG++D  CCF       E +++
Sbjct:   25 SAWPRFHDRINEVADNFFYRLGYWVATHPKRTLLISLVLVIACCFGFANFR----------------------IEG--DDG-EYATFLVESPSETGSVLTKESVDAVWELDAIVMAVEVD-GNTYADLCSKELDGATCEPVFRGITRFWG-DFYTYEASVTSDADILAAVNVTTFPDGSAVSEQALFGNGITYDDDGNISGARAVIQGYALASDPDDGADINDYVFDWNEAFHDAMQ-----EATDDF----DVLDVYYLTSRSGNDALEEAVSGEIFLFITTYILMVAFVSVAIGRCCSGPVKRRSWLGVGGVMLVVAAGLAAYGINSGFDIPFTPLSRILPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFMLGSMSSLPAVEYFCLYAGTAILFDFFLQMTAFVALLTMDANRQKAGKIDSCCCFTSKKYLREQERQ 451          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 2.940e-127
Identity = 214/465 (46.02%), Postives = 289/465 (62.15%), Query Frame = 1
Query:   28 KVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFRE-VREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            KVS W   H   N+  D  FYRLGYWVATHPK TLL++L FV+ C  GF NF++  DGE LWVPA+SLT     II G FD G ++A  L+ES  E G+VLTK+SVD +W+L+A VMA++ + GNTY ++C    DGV+C QP RGITRFWG DF  YE+SV  DADVLAAV+ T +PDG AV  +++FGN +     G+++ A A +Q+Y L+  +++DA   E V +W + F D ++ V    +ED      D F + Y T RS DDA++ SVS           +M+ F+++ +G+C  G V++RSWL + G+  +++AGVAAYG+NS F VPFTTLSQ+LPFIL+GIGVDDM VIV+++D TDP L VE RVAL +KRCGVSIT                                         +FVA L +DA RQ AGR+D  CC   ++   + +++
Sbjct:   22 KVSAWSIFHGRINKVADTLFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRVEADGEDLWVPADSLTNDQRDIILGDFDGGGEFASFLVESPSETGSVLTKESVDAVWELDAIVMAVKVD-GNTYADVCLKELDGVTCEQPFRGITRFWG-DFATYEASVSNDADVLAAVNATTFPDGSAVNQQALFGNGITYDDDGNISGATAIIQAYALDSDSDEDAGINEIVYDWNEAFQDAMDAV----SEDF-----DVFGVFYLTSRSTDDAISESVSD---------VLMIAFVSVTIGRCCRGHVKQRSWLAIGGIVFVIAAGVAAYGVNSGFGVPFTTLSQMLPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGIKRCGVSIT-----------------------------------------SFVALLTIDAKRQSAGRIDCYCCLTSETHLQQQERQ 425          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 2.060e-109
Identity = 182/333 (54.65%), Postives = 234/333 (70.27%), Query Frame = 1
Query:  388 TESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEF-REVREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCF 1383
            T  G+TY ++C    DGV+C  P RG+TRFW + F AYE+SV +DADVL AV+V  +PDG  V  +++FGN +V    G+++  KA +Q Y L    +DDA+  +EV +W + F D +E                                  SVSGE FL+  TY +MV+F+T++LG+C AG V RRSWLG+ G+ ++V+AG+AAYGLNS F VPFT+LSQILPFILIGIGVDDM VIV+++D TD ALPVE RVAL VKRCG+S+TYTS+TNFFAF+LG+ +SLPAV+YFCLYA TAILFDF +Q+TAFVA L MDANRQKAG++D  CCF
Sbjct:   19 TWGGHTYADVCAKELDGVTCAAPFRGVTRFW-DGFAAYEASVTSDADVLEAVNVEAFPDGFPVNQQTLFGNGIVYDDDGNISGVKAIIQGYALSSDPDDDADINKEVFDWNEAFQDKLEASTXXXXXXXX--------XXXXXXXXXXXXXXESVSGEIFLYFATYVIMVLFVTVSLGRCCAGPVERRSWLGVGGIMLVVAAGLAAYGLNSGFGVPFTSLSQILPFILIGIGVDDMFVIVAAYDHTDRALPVEERVALGVKRCGLSVTYTSLTNFFAFLLGAQSSLPAVQYFCLYAATAILFDFFLQMTAFVALLTMDANRQKAGKIDCCCCF 342          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 2.680e-95
Identity = 185/465 (39.78%), Postives = 247/465 (53.12%), Query Frame = 1
Query:   28 KVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFRE-VREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCCFKGDSRYAELDKE 1419
            K S W R+H   N   D  FYRLGYWVATHPK TLL++L FV+ C  GF NF+I  DGE LWVPA+SL K  + II   FD+  +YA LL+ES    GNVLTK+SVD +W+L+A VMA+E                                       +SV +DAD+LAAV+V  +PDG  V   ++FGN +     G+++ A A MQ+Y L    ++D++  + V +W   F D +E V     +D      DA  + Y T RS+DDAL  SV+GE FLF+ TY +MVVF+++ +G+C  G V++RSWLG+ GV ++++AG+AAYGLNS F +PFT+LSQILPFIL+GIGVDDM                                                                       +TAFVA L MDANRQKAG++DW CCF       E +++
Sbjct:   24 KGSAWSRLHGRVNEVADNFFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRIEADGEDLWVPADSLAKDQQDIIVQDFDDDGEYAALLVESP--SGNVLTKESVDAIWELDAIVMAVE---------------------------------------ASVTSDADILAAVNVATFPDGSTVNQLALFGNGITYDADGNISGASATMQAYALGSDPDEDSDLNDDVFDWNGAFQDAMEEV----TDDF-----DAVDVYYITSRSIDDALEESVTGEIFLFITTYVLMVVFVSVAIGRCCTGPVKQRSWLGVGGVMLVIAAGLAAYGLNSGFDIPFTSLSQILPFILVGIGVDDM-----------------------------------------------------------------------MTAFVALLTMDANRQKAGKIDWCCCFTSKKYLQEQERQ 367          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: A0A835YJJ3_9STRA (Patched family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ3_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.460e-87
Identity = 184/467 (39.40%), Postives = 258/467 (55.25%), Query Frame = 1
Query:   28 KVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQ--------------GYFDEGSDYALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGS-VASAKAFMQSYELEQ-TANDDAEFREVREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCC 1380
            K+  + R+H    R     FYR GYW+ATH  +TL + L   + C IGF+N +  T G  LWVP +S +KQ    ++               +    +D  LL +  A +G NVLT  +V  +W     V+A+    G +Y +LC   A G +C   + GI  FW +D   Y++ V T++D+LAAV VT +PDG  V     FG   V  P GS VASA+A    + +     N D   R                         +S+       +F  RS+DD LA S+SGE +LF ITY +M VF  + LGK     V+ R+ LG+  V  IV +G  AYGL +AF VPFT+L Q+LPF+LIGIG+DD  ++  + D  +P LP   R+A A+ RCG+S+ YTS+ NF  FMLG+ ++LPA+EYFC+YAG A+LFDF +Q+ +F+A LA D +RQ+A + D LCC
Sbjct:   25 KLKFYDRLHHELERVSQRAFYRAGYWIATHRVVTLAVTLLIALACCIGFLNIQSETAGIKLWVPQSSKSKQDLDTMEDNXXXXXXXXXXXXAFGKADADAQLLFV--APKGANVLTLANVAQIWSAYDAVVAVTAGEGESYEDLCARDASG-ACE--VHGILEFWSSDRATYDAEVATESDLLAAVSVTAFPDGSPVSRAVEFGALEVTPPDGSTVASAQAVRLVFSMRGGDGNSDNVSRGXXXXXXXXXXXXXXXFINTVGPLMSSL-QGMEGYWFAERSIDDELARSISGEVYLFAITYVLMAVFAMLTLGKLDR--VKGRARLGLICVTCIVISGAGAYGLCAAFGVPFTSLQQVLPFLLIGIGLDDAFIMAGALDLVNPDLPTAERIAEAMGRCGLSVFYTSIINFMVFMLGANSTLPAIEYFCIYAGVAVLFDFLLQVPSFIALLAYDTDRQRARKYDLLCC 483          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: A0A7S2WB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB13_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.820e-83
Identity = 168/450 (37.33%), Postives = 256/450 (56.89%), Query Frame = 1
Query:   40 WVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDY---ALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFREVREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSMTNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQKAGRMDWLCC 1380
            W  +       ++E F RLG+ VA HP   +L  L  V++CS GF+ FK   +G+ LWVP +S  KQ E  I   FD   DY   ++L + ++  G +V+  D ++ +WD    V      +G +++ELC I      C   + G+T+F+ N+   Y   V T  D+++ +  T YP GQ V  + +FG     +  G + SAK  +  +++     D +      +W++ F + ++GV    ++           + YF  RS +D LAASV+G+  L VITYT+M+ F    L K G   V+ R  L +AG+ II+ A V  YGL+S   V F ++ Q+LPFI++GIGVDD+++IVS+FD TD  L  E R++LA++RCGVSITYT++T+  AF LG+ ++LPA++ FC+YA  AILF+F  Q T F A +  D  R  + +MD LCC
Sbjct:   30 WYSLGRKVEHEIEEFFGRLGHSVARHPVRYILGVLFTVLVCSAGFLRFKPENEGDKLWVPQDSKAKQDEDYISSRFD--GDYRGGSVLFVATSATGKDVIDLDVMEDIWDAYEVVFEQTKANGKSFSELCAITDFDGDC--VVFGMTQFFNNNRTYYNQVVATREDLISEISATRYPSGQEVNQDQIFGKYTQNATTGEITSAKGTLLFFQI-----DGSPLSRALKWEESFLNKVDGVKPQYSK-----------VYYFADRSFNDELAASVAGDIGLMVITYTLMISFTCTVLAK-GYNVVQTRVGLSVAGIMIILLAIVTGYGLSSGLGVIFVSIHQVLPFIIVGIGVDDLLIIVSAFDSTDERLSSENRLSLALRRCGVSITYTTLTDVSAFFLGATSALPAIQAFCIYAAFAILFNFLFQCTMFTALMVYDTERMNSFKMDVLCC 458          
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Match: A0A7S2WAH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAH6_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.890e-65
Identity = 139/388 (35.82%), Postives = 214/388 (55.15%), Query Frame = 1
Query:   40 WVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAFVVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDY---ALLLMESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCRQPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGNSLVRSPAGSVASAKAFMQSYELEQTANDDAEFREVREWQKLFHDLIEGVMAGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVFITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYT 1194
            W  +       ++E F RLG+ VA HP   +L  L  V++CS GF+ FK   +G+ LWVP +S  KQ E  I   FD   DY   ++L + ++  G +V+  D ++ +WD    V      +G +++ELC I      C   + G+T+F+ N+   Y   V T  D+++ +  T YP GQ V  + +FG     +  G + SAK  +  +++     D +      +W++ F + ++GV    ++           + YF  RS +D LAASV+G+  L VITYT+M+ F    L K G   V+ R  L +AG+ II+ A V  YGL+S   V F ++ Q+LPFI++GIGVDD+++IVS+FD TD  L  E R++LA++RCG SITYT
Sbjct:   30 WYSLGRKVEHEIEEFFGRLGHSVARHPVRYILGVLFTVLVCSAGFLRFKPENEGDKLWVPQDSKAKQDEDYISSRFD--GDYRGGSVLFVATSATGKDVIDLDVMEDIWDAYEVVFEQTKANGKSFSELCAITDFDGDC--VVFGMTQFFNNNRTYYNQVVATREDLISEISATRYPSGQEVNQDQIFGKYTQNATTGEITSAKGTLLFFQI-----DGSPLSRALKWEESFLNKVDGVKPQYSK-----------VYYFADRSFNDELAASVAGDIGLMVITYTLMISFTCTVLAK-GYNVVQTRVGLSVAGIMIILLAIVTGYGLSSGLGVIFVSIHQVLPFIIVGIGVDDLLIIVSAFDSTDERLSSENRLSLALRRCGGSITYT 396          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7401.16288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK9_ECTSI4.430e-21068.99Similar to Patched domain-containing protein 3, pa... [more]
D7FY89_ECTSI2.040e-16956.01Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D7FY95_ECTSI1.090e-15350.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY98_ECTSI1.630e-15353.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY88_ECTSI2.940e-12746.02SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LCK4_ECTSI2.060e-10954.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5K0_9PHAE2.680e-9539.78SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YJJ3_9STRA1.460e-8739.40Patched family-domain-containing protein n=1 Tax=T... [more]
A0A7S2WB13_9STRA3.820e-8337.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WAH6_9STRA2.890e-6535.82Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7401contigL-elsbetiae_contig7401:2015..9030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score612.1
Seed ortholog evalue2.2e-172
Seed eggNOG ortholog2880.D8LCK9
KEGG koko:K07752
Hectar predicted targeting categoryother localisation
EggNOG free text desc.molting cycle, collagen and cuticulin-based cuticle
EggNOG OGsKOG1934@1,KOG1934@2759
EC3.4.17.22
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons12
Model size1419
Cds size1419
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7401.16288.1prot_L-elsbetiae_contig7401.16288.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7401 2015..9030 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816825.4020474-CDS-L-elsbetiae_contig7401:2014..22131622816825.4020474-CDS-L-elsbetiae_contig7401:2014..2213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2015..2213 +
1691683842.2555032-CDS-L-elsbetiae_contig7401:2014..22131691683842.2555032-CDS-L-elsbetiae_contig7401:2014..2213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2015..2213 +
1622816825.4172344-CDS-L-elsbetiae_contig7401:2478..25531622816825.4172344-CDS-L-elsbetiae_contig7401:2478..2553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2479..2553 +
1691683842.2749872-CDS-L-elsbetiae_contig7401:2478..25531691683842.2749872-CDS-L-elsbetiae_contig7401:2478..2553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2479..2553 +
1622816825.4282832-CDS-L-elsbetiae_contig7401:2817..29301622816825.4282832-CDS-L-elsbetiae_contig7401:2817..2930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2818..2930 +
1691683842.285151-CDS-L-elsbetiae_contig7401:2817..29301691683842.285151-CDS-L-elsbetiae_contig7401:2817..2930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 2818..2930 +
1622816825.4378026-CDS-L-elsbetiae_contig7401:3527..36441622816825.4378026-CDS-L-elsbetiae_contig7401:3527..3644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 3528..3644 +
1691683842.2950864-CDS-L-elsbetiae_contig7401:3527..36441691683842.2950864-CDS-L-elsbetiae_contig7401:3527..3644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 3528..3644 +
1622816825.4494503-CDS-L-elsbetiae_contig7401:4287..44371622816825.4494503-CDS-L-elsbetiae_contig7401:4287..4437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 4288..4437 +
1691683842.304773-CDS-L-elsbetiae_contig7401:4287..44371691683842.304773-CDS-L-elsbetiae_contig7401:4287..4437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 4288..4437 +
1622816825.4621015-CDS-L-elsbetiae_contig7401:4760..48751622816825.4621015-CDS-L-elsbetiae_contig7401:4760..4875Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 4761..4875 +
1691683842.3143065-CDS-L-elsbetiae_contig7401:4760..48751691683842.3143065-CDS-L-elsbetiae_contig7401:4760..4875Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 4761..4875 +
1622816825.4725344-CDS-L-elsbetiae_contig7401:5377..54881622816825.4725344-CDS-L-elsbetiae_contig7401:5377..5488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 5378..5488 +
1691683842.323634-CDS-L-elsbetiae_contig7401:5377..54881691683842.323634-CDS-L-elsbetiae_contig7401:5377..5488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 5378..5488 +
1622816825.4855967-CDS-L-elsbetiae_contig7401:6348..64921622816825.4855967-CDS-L-elsbetiae_contig7401:6348..6492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 6349..6492 +
1691683842.3330095-CDS-L-elsbetiae_contig7401:6348..64921691683842.3330095-CDS-L-elsbetiae_contig7401:6348..6492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 6349..6492 +
1622816825.4970627-CDS-L-elsbetiae_contig7401:6828..68961622816825.4970627-CDS-L-elsbetiae_contig7401:6828..6896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 6829..6896 +
1691683842.345403-CDS-L-elsbetiae_contig7401:6828..68961691683842.345403-CDS-L-elsbetiae_contig7401:6828..6896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 6829..6896 +
1622816825.506459-CDS-L-elsbetiae_contig7401:7249..73461622816825.506459-CDS-L-elsbetiae_contig7401:7249..7346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 7250..7346 +
1691683842.354745-CDS-L-elsbetiae_contig7401:7249..73461691683842.354745-CDS-L-elsbetiae_contig7401:7249..7346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 7250..7346 +
1622816825.5160606-CDS-L-elsbetiae_contig7401:8197..83131622816825.5160606-CDS-L-elsbetiae_contig7401:8197..8313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 8198..8313 +
1691683842.3659494-CDS-L-elsbetiae_contig7401:8197..83131691683842.3659494-CDS-L-elsbetiae_contig7401:8197..8313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 8198..8313 +
1622816825.5257218-CDS-L-elsbetiae_contig7401:8916..90301622816825.5257218-CDS-L-elsbetiae_contig7401:8916..9030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 8917..9030 +
1691683842.3751774-CDS-L-elsbetiae_contig7401:8916..90301691683842.3751774-CDS-L-elsbetiae_contig7401:8916..9030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7401 8917..9030 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7401.16288.1

>prot_L-elsbetiae_contig7401.16288.1 ID=prot_L-elsbetiae_contig7401.16288.1|Name=mRNA_L-elsbetiae_contig7401.16288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
VTDVTVSDVKVSGWVRIHAAANRAVDEKFYRLGYWVATHPKLTLLLNLAF
VVLCSIGFVNFKIVTDGEVLWVPANSLTKQHEVIIQGYFDEGSDYALLLM
ESAMEGGNVLTKDSVDTLWDLNARVMALETESGNTYTELCTIAADGVSCR
QPLRGITRFWGNDFDAYESSVMTDADVLAAVDVTEYPDGQAVLLESVFGN
SLVRSPAGSVASAKAFMQSYELEQTANDDAEFREVREWQKLFHDLIEGVM
AGEAEDGGASVADAFTLRYFTGRSLDDALAASVSGETFLFVITYTVMVVF
ITINLGKCGAGSVRRRSWLGMAGVAIIVSAGVAAYGLNSAFSVPFTTLSQ
ILPFILIGIGVDDMIVIVSSFDQTDPALPVERRVALAVKRCGVSITYTSM
TNFFAFMLGSATSLPAVEYFCLYAGTAILFDFGMQITAFVACLAMDANRQ
KAGRMDWLCCFKGDSRYAELDKE
back to top

mRNA from alignment at L-elsbetiae_contig7401:2015..9030+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7401.16288.1 ID=mRNA_L-elsbetiae_contig7401.16288.1|Name=mRNA_L-elsbetiae_contig7401.16288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7016bp|location=Sequence derived from alignment at L-elsbetiae_contig7401:2015..9030+ (Laminarionema elsbetiae ELsaHSoW15)
GTAACAGATGTGACGGTGTCGGATGTCAAAGTGTCTGGCTGGGTGCGGAT TCATGCCGCGGCTAACCGGGCAGTGGACGAGAAGTTCTACCGGCTGGGCT ACTGGGTGGCGACTCACCCTAAGCTGACTCTGCTGCTAAACCTGGCGTTT GTTGTCCTCTGCTCCATCGGCTTTGTTAATTTTAAGATCGTGACAGACGG TGAGAGGTTCGTTGTTGGTTGAATGCTGACTGTTTTTCCATGCCTAGATC TAGTCTAGCCCTTTATCGGCTTTTTACTGGTGGTGCTGAAAGTGTTGTGT TGGGCTACGTCAAGTGTTGGCTGCTGTATGTAGGTTGCAATTAATCCAAA AGTTAGCTGGGTTTCGTGTCATACCTACAATGCCATGGGTACCCGTGCAG ACCGCAAGCCGTATGTACATGCCTTTTTGTTCTGCTCTACCCTTTGGACG GCGCGCACGAACAGGCGAAGTTCTGTGGGTCCCCGCCAACTCTCTGACAA AGCAGCACGAGGTGATAATCCAAGGCTACTTCGACGAAGGTACGTAATAT GTACACAATGACCCTTGGTGCACAAGGGAAACACGACGAGCGGAGGTTGC GGTTTCCAGGAGTCAGCCACTCTCCACGGAGCACAAGCCTGTATGAATCG CATCGTTTGTAAAGCATCGGGGTTGCTGCGAACAATGAGATGTACCTGAG GGCTCGCGGCTGCACTGCTATGTACCCCCGGCATCCTCGGCAAGCTAAGA TCGCACCCGTGCCTTATCTGATGGCTCACTAAAAACTCTCGTCGTGGGAT CAGGCTCGGATTACGCGCTGCTCTTGATGGAGAGCGCAATGGAGGGCGGC AATGTACTGACGAAGGACTCGGTGGACACGCTCTGGGACCTTAATGCCAG GGTTATGGCTCTCGAGGTGACGAAAAGAAGAGGTTGTGAAGACATTGGGG GAAGGATCGTGGCCTAGTCGTCCCCGCCAAGTTTGCTTTGTTGTGGCCGG TGTACACGGAAAACCCAACAAATGAAACGCCGGTTTCCATTCATGTGACG CCCGAATTCGTAGCATCGATGGCAGTGAGACCAACCAACCTGCATGCGTC AGCCATGTGCGCGGGTAGAGTAGATTTTCGAGCGGATCGAACTGTGCCGT CTTTTTTTTGCCAGGAGCGCGTGCCGTGTCTTTTCGAAAATCGACGTTTT CAGACGTCGACCGATTGCCCCTCGTAAGCGAACCCCTTCCGTGAAGGATG TGTCTCCTGAAACCGCGACCGCTGTTCATGAAATACAATATCAATATCCT TGGGGAGCCCCGTAAACTCGGAAGATATGACGGGAGGTGTTGCTGCTCCC GGGCCCGAGGCCCGTCGTCCAACCCTCAAGGCTAGGCGTGCGTGTGTGTG CAACACACGACGAACCCCCTTTCCATCACGGGGCTCCTTTTTCCGAGAAA GGGTTGGAAATGAGTGCTCGTCTTCACGGTTTCCCGCTTCAAACTCTCCG GTCGATACGGCAGACCGAGAGCGGCAATACGTACACCGAGTTGTGCACGA TTGCTGCAGACGGAGTTTCGTGCAGACAGCCCCTCCGCGGGATCACCCGG TTCTGGGGCAACGACTTCGACGCCTACGAGGTACTGACGACCCGCAGCAA GAAAGCGCAGCACGAAACCCCCGCATGGCACGACCTGCAGCCTGCTCAAG TTGGAGCTCTCTATGTAGTGCCATCACAATCCCTCATCGGCCCGCCGGCG GTCTATATTGTTATAAGTGGAGAAGCGCTCACGGACACACACAGAGAATT TTAGTCACCTAAGCTCGCCGGCACGCGTGGCGTTATATGCTGTCTATCCC CTCCCGCGTGCGAGCTACACACGTACACCACCGACAGGTGTATGTAGGAA GCGAGCTCTAGCCGAAACACGCGCCATAGCATTGTGGCGTATTTGAACTT CCGTTTTCCCTTGCTTTGGGGATTCCGCCGTTTTTTTTGTGCCCCCCCCC CCCCCCCCCCCCCCCCCTCCCCCACCCGCACCCACCTCTCCCAGCGCCGC CTCGACCCTCCCGCTCGCTCNNNNNNNNNNCGCCCCAGCCTTGTGGGGTT TTTGAACTTCCGTTTTCCCCTGCTTTGGGGGTTCCCCCGTTTTTTTTGTG CCCCCCCCCCCCCCCTCCCCGGTCTGAAAGAGCTCGGTCACGACCGACGT GGTGTATTTGAACTTCCGTTTTCCTTTGCTTTGGGGGTCCCGCCGTTTGT TTGTCCCCCCCCCGGTTTGAAAGAGCTCGGTCATGACCGACGCCGACGTG CTGGCGGCGGTCGATGTGACTGAATACCCAGACGGGCAAGCGGTCTTGCT GGAGTCGGTGTTCGGCAACAGCCTGGTTAGGTCGCCCGCTGGCAGCGTGG CCAGCGCTAAGGCTTTCATGCAGGTGCGCTTTCGAGCGTAAGTAGCCTAC TACGGCGGAGCGTGAGCAAGAGGGAGACGGTTTCGTCACCGTTTCGATAA CGCGGGGTGGCAACGCTGTTCTTGTCTTTCGGAACCCCGGTGTAAAAACT ATTTGGGTGGAGAATTAGTTGGTCGGCGTCTTCGCCCTCCGAATCGTTCC GGCGTGCCTCGGACGACGCCAGCAACGGCGGGGCAGCCTCTGAAAACTTG TGAGAGCGTTATGTCTGTAGGTATGCATGCACGCATGCATGCAACAACCA ACTGCTTACGACGACTTCGCTTTGTTCCCCCGTGCTTGTGCCTTAGTCGT ACGAGCTGGAGCAGACCGCGAATGATGACGCGGAGTTCCGGGAGGTCCGG GAGTGGCAGAAGCTTTTCCATGACCTCATCGAGGGGGTTATGGCAGGCGA GGCAGAGGACGGTGCGTACCGGACGATACTCTTATCGTAGTGCCCCGTAG GATGCCTATGCACATCGTCTTGCTTGCACGCACTGACCAGACCTCCCGCG GGCCCGTGACTACACAAGGAGACCCGACGAAAACACGTAGCCCACAGGCG GCTTCGCACCTGTAACCCAAGGGGGGGGGGGGGGGGGGGTGCGGGCGGCG GGGGGGGGAGGGAGGGGGGGGGGGCAGCGTGGGGTGGGGATCGGGGAGGG GCGCGCTTCATGGCGNNNNNNNNNNGGGGGGGGGCGGCGCGGTGTGGGGG GGGGGGGGGGGGGGGGGGGTCTAGTCGTCGTGGAGGAGAAGGAAGGGGGG TGGCAACAGGTTGGTTAGCCTCTGGGCAGGGCCTCATTCCTGCTGGTGTT TGGAGGATGATCTTTGTCAGCAGCCGCGGCAGCTGCAACAACCACCGCTC TAGCTTTGATCACACCGTGATGTATTGAAATGCGCTTTGTTTTGGTGCCT GTACGTGGGGCAGGTGGCGCGAGCGTCGCGGACGCTTTCACTCTGAGGTA CTTTACCGGCAGGTCGCTTGACGACGCCCTGGCAGCCAGCGTGTCGGGAG AAACCTTTCTTTTCGTCATCACATGTGGGTACATTGCTGTTGTTGTTGTT GCTGTTGCTGCTGTTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTCTTCACAATAAAAATCGTCCCGGTCTCCCTATCCAGTA CCTCCATATGTCCATACCGATCCAACGCGTGACGCGGTCGATTCCCGTGG TCGCAGACTGATTAATTTAAACAGGTTAGCTATCTAAAAAAAACAGAAAT GGACTCGAAGGGCCAGCAAAGCAAAGCAATAAAAGATCAGACCAGATAGT CCGGGTACACAGATGTGACTAATTAAAAAAAACTACCATAGGCTACATTC GACAGCGTCAAATCGACTGAAAGACGGGGGAGTCCCGAAACCACTCAAAC AAAGAAGCAATGGGTTGTCCCCTAGCATCTGGACAGCTGATAAACAAACC GCACACCTCTTACAGATGTCCTATGGTGGGCTTGTCTGTCGGGTCTAATA TTTAGGACCATCCCAGCAGCCTTTTGGCGCGAATACCTCGCCTTGAAACC GGCAAGTTGACAGCAAACAAAACTGATGTTGATCGTGAAGAGCCGGTTGT TGCGACCAGCCTGCATTGCACTTCACGGGGGCAGTCATGCTTCGGGAGAA CGCGCTGCACGCACGGGCTCGCGCCACTCAAGGACCACCCTACAGCGGTA CACGTCCATCTGTCACCACCACGGACAACTCGCTCTTTTGACAAATCGTG GTCCATCGCTTAAAGGCACTAACATACTCGCCCACGACCAATCCCACCGC TCGCCGTTTATTTGGCGCCCTTCCCTTCTCGTTGCGTCGCAAAAAACAAA ACTGATCGAACTGATGTTCCTTTTTTTTCCCCAGACACTGTCATGGTGGT CTTCATCACAATCAACCTGGGGAAATGCGGCGCCGGGTCGGTCAGGAGAA GAAGCTGGCTCGGAATGGCCGGGGTTGCAATCATCGTCTCCGCTGGCGTC GCTGCGTATGGCCTCAACAGCGCCTTCAGTGAGCCACTTTTTATCTGTCC CCTCCTCCCCTAGAAACCAAAACACGTAAAGGATTGCGGGATTTTTATAG CTCGGGCGGTGCTAAACGGCTGCATTTGCTCATTTTATGCGGGTTGCTGT CGGTGGTGAATAATACTACCATGGGTATGTGTTGGCGTTTTGGCTGTATG CACGAAGTCTCGTCCCCTGGCAAGTGCGAGTTTTTCGGTGGCACTAGAAG CGGAGTGGTAGCCTATCGTCCTCCAAGTAGTAGCCTCTCGCCCTCCACGC CTTCCCTCGGAGGCATCTATTCAGCCCGAGACTCCTTCCTCTCTGTTGTT CCAAACCACGGCAGGCGTTCCTTTCACGACGCTGTCCCAAATCCTTCCCT TCATCCTCATCGGCATCGGCGTCGACGACATGGTAAGCTATGCATGTACG CACTTGCACCGATTTGACCTGATTCGATCGAATTGATGATTCCGAAAAAA ACAACACAAAAAACGTTTTTTCCACCTTTTGAAACGGATAACCACGCCGC TACTGCCGCTACCGCCGCCGCCGCCGCGAACAAAGCGCCGCTTTCCTGTT CAAGCGGTCTTTGGTAGCTCTAGTGTGGTCGATCGATATGCCTTCACGCA TATTTAGCATACATCAGCGAACAGTATCACGAACGATTCCCCGAGAGCTT CAAAAATCGTCCTGCTTCTTTTGTTTTCATGGTTATTCTGTATCGCGAAA CGTGTTCGCGAAAATCCCGAACGACTGAAATTCAGATCGTCATCGTGTCG TCTTTCGACCAAACCGACCCGGCCTTGCCCGTCGAGAGGAGGGTAGCCTT GGCCGTCAAGCGCTGCGGGGTGTCGATCACCTGTGAGAGAAAACACCACT CACGCCACTGCCACCCTTCGCCGTATCTAAGTATATGGGTCGTTGAGGTT GACATATATATATATATATATTCCGCGCCAACTATCAGGCGGTTTTTTCT CCTTTTGTTTATGTTTGCAGGTGGTGATCGATGCCAGACCGCGTGCAGCC ACGCAGCAGTGCCACGCGGCGTTAAATAGTTTTATGTATGTATGGCAGGT TTCTCTGCGACACGGGGGGGGTGCCCAATTTTGCTGCTGCCGACGTTGGT CGCTTGCTACGTATCTAGGAGTGACAACTCAACAAAAACTCACCGTGAAT AAAATCTAGTCTATATGAGGGAGAGAAAATCGCTCGGTTGGGTAAATAAG TGCACCTGGGCCGACGTATTTGGCATGTCGGTATCCGCGGCAACTCAGGC TCCTGAGAGAGACGCATATCGTGGCAGACCAAGCCGTGCAAGGTGCTTGT TCGGAGCGTTTATTAACGCTCCAGTTTGTTTCCAAATTTGGAACAATCCG GAATTCGGAAAACGTTCCAAAATTAAAACAAATGTGAAAAGCGACCGAGT TCCAACTTTTTTGACCCCCGTTCTTTCCAATTTTTTCGGAAGCTCCAAAT TTGAGTAATCATTTCTCTGGGACGCCGCAATTGGCCGTTCGGTGTTTTTC TGGTTCCGAAAGTTTGGAGATTTGGAAGAAAAGGCGCGGCGTTAAAAATC GTTCCATTTTTCGGCCGTGGAAAAAGCCCCCTCTTTTGGTGCAGAACGGC TCACCATCCATCAAGAGACACAATGCACGTGGCCCGCGCGTCCACGCCCT CGATCTTTTCTTCGTGCGCGCCGCGCATTTCAGACACTTCTATGACGAAT TTTTTCGCCTTCATGCTGGGTAGCGCCACGTCTCTGCCCGCCGTCGAGTA TTTCTGTCTGTACGCCGGCACCGCCATCCTCTTCGACTTCGGCATGCAGG TGAACGAATTAACCATATCAGTCGATTTAGCCCGTTTCTTCTATCTATCT TCTCACACCACATGTATGTGCCTGTAGTTTAGTCACACGCGAGGAGAAGG TCTAGCTACCTTTCGAAAAGCGGGATACATATAGATGTACATACGTATCA GCACACCCAGTCTTTTCCGGCTTTGTTTATTGTGCTCAACTACGACCTCA CCGTCGACGAGGGAAAGGGACGGCTGAACCCTTCTCGCGACAAAAATCTT AGGCAAGCACCGCAGACGGGGAGAGTGGGGTACCTTGAGAAAAGAAACTC CCATCTGTGTGACCACGATTCAGTACCCTGGTAATACGTCCTCGTGTCAA GGAACCCATCGAGCACTGGAAATAAATGTGAAGAAAAATAACAAAAAAAC ACACACACACACACACACACAATGGGAGCTAAAGAATGGTGAGTGGTGCA CGTAATAGAACGCACGCACGCGACAACACTTCAAAACTATGGTACATTAC ATATTCTACGTAACACACATAGTAGCTGGCTTCTTTAAAACACACAACAA TTTCTATGTAGATCTACCATCGATACCCCTACGCCCGGCATGCCATGCAC AGATCACGGCGTTCGTCGCTTGTCTAGCAATGGATGCGAACCGGCAGAAG GCGGGCAGGATGGACTGGCTCTGCTGCTTCAAGGGAGATTCTCGATACGC CGAGTTAGATAAAGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7401:2015..9030+

>mRNA_L-elsbetiae_contig7401.16288.1 ID=mRNA_L-elsbetiae_contig7401.16288.1|Name=mRNA_L-elsbetiae_contig7401.16288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2838bp|location=Sequence derived from alignment at L-elsbetiae_contig7401:2015..9030+ (Laminarionema elsbetiae ELsaHSoW15)
GTAACAGATGTGACGGTGTCGGATGTCAAAGTGTCTGGCTGGGTGCGGAT
TCATGCCGCGGCTAACCGGGCAGTGGACGAGAAGTTCTACCGGCTGGGCT
ACTGGGTGGCGACTCACCCTAAGCTGACTCTGCTGCTAAACCTGGCGTTT
GTTGTCCTCTGCTCCATCGGCTTTGTTAATTTTAAGATCGTGACAGACGG
TAACAGATGTGACGGTGTCGGATGTCAAAGTGTCTGGCTGGGTGCGGATT
CATGCCGCGGCTAACCGGGCAGTGGACGAGAAGTTCTACCGGCTGGGCTA
CTGGGTGGCGACTCACCCTAAGCTGACTCTGCTGCTAAACCTGGCGTTTG
TTGTCCTCTGCTCCATCGGCTTTGTTAATTTTAAGATCGTGACAGACGGC
GAAGTTCTGTGGGTCCCCGCCAACTCTCTGACAAAGCAGCACGAGGTGAT
AATCCAAGGCTACTTCGACGAAGGCGAAGTTCTGTGGGTCCCCGCCAACT
CTCTGACAAAGCAGCACGAGGTGATAATCCAAGGCTACTTCGACGAAGGC
TCGGATTACGCGCTGCTCTTGATGGAGAGCGCAATGGAGGGCGGCAATGT
ACTGACGAAGGACTCGGTGGACACGCTCTGGGACCTTAATGCCAGGGTTA
TGGCTCTCGAGGCTCGGATTACGCGCTGCTCTTGATGGAGAGCGCAATGG
AGGGCGGCAATGTACTGACGAAGGACTCGGTGGACACGCTCTGGGACCTT
AATGCCAGGGTTATGGCTCTCGAGACCGAGAGCGGCAATACGTACACCGA
GTTGTGCACGATTGCTGCAGACGGAGTTTCGTGCAGACAGCCCCTCCGCG
GGATCACCCGGTTCTGGGGCAACGACTTCGACGCCTACGAGACCGAGAGC
GGCAATACGTACACCGAGTTGTGCACGATTGCTGCAGACGGAGTTTCGTG
CAGACAGCCCCTCCGCGGGATCACCCGGTTCTGGGGCAACGACTTCGACG
CCTACGAGAGCTCGGTCATGACCGACGCCGACGTGCTGGCGGCGGTCGAT
GTGACTGAATACCCAGACGGGCAAGCGGTCTTGCTGGAGTCGGTGTTCGG
CAACAGCCTGGTTAGGTCGCCCGCTGGCAGCGTGGCCAGCGCTAAGGCTT
TCATGCAGAGCTCGGTCATGACCGACGCCGACGTGCTGGCGGCGGTCGAT
GTGACTGAATACCCAGACGGGCAAGCGGTCTTGCTGGAGTCGGTGTTCGG
CAACAGCCTGGTTAGGTCGCCCGCTGGCAGCGTGGCCAGCGCTAAGGCTT
TCATGCAGTCGTACGAGCTGGAGCAGACCGCGAATGATGACGCGGAGTTC
CGGGAGGTCCGGGAGTGGCAGAAGCTTTTCCATGACCTCATCGAGGGGGT
TATGGCAGGCGAGGCAGAGGACGTCGTACGAGCTGGAGCAGACCGCGAAT
GATGACGCGGAGTTCCGGGAGGTCCGGGAGTGGCAGAAGCTTTTCCATGA
CCTCATCGAGGGGGTTATGGCAGGCGAGGCAGAGGACGGTGGCGCGAGCG
TCGCGGACGCTTTCACTCTGAGGTACTTTACCGGCAGGTCGCTTGACGAC
GCCCTGGCAGCCAGCGTGTCGGGAGAAACCTTTCTTTTCGTCATCACATG
TGGCGCGAGCGTCGCGGACGCTTTCACTCTGAGGTACTTTACCGGCAGGT
CGCTTGACGACGCCCTGGCAGCCAGCGTGTCGGGAGAAACCTTTCTTTTC
GTCATCACATACACTGTCATGGTGGTCTTCATCACAATCAACCTGGGGAA
ATGCGGCGCCGGGTCGGTCAGGAGAAGAAGCTGGCTCGGAATGGCCGGGG
TTGCAATCATCGTCTCCGCTGGCGTCGCTGCGTATGGCCTCAACAGCGCC
TTCAACACTGTCATGGTGGTCTTCATCACAATCAACCTGGGGAAATGCGG
CGCCGGGTCGGTCAGGAGAAGAAGCTGGCTCGGAATGGCCGGGGTTGCAA
TCATCGTCTCCGCTGGCGTCGCTGCGTATGGCCTCAACAGCGCCTTCAGC
GTTCCTTTCACGACGCTGTCCCAAATCCTTCCCTTCATCCTCATCGGCAT
CGGCGTCGACGACATGGCGTTCCTTTCACGACGCTGTCCCAAATCCTTCC
CTTCATCCTCATCGGCATCGGCGTCGACGACATGATCGTCATCGTGTCGT
CTTTCGACCAAACCGACCCGGCCTTGCCCGTCGAGAGGAGGGTAGCCTTG
GCCGTCAAGCGCTGCGGGGTGTCGATCACCTATCGTCATCGTGTCGTCTT
TCGACCAAACCGACCCGGCCTTGCCCGTCGAGAGGAGGGTAGCCTTGGCC
GTCAAGCGCTGCGGGGTGTCGATCACCTACACTTCTATGACGAATTTTTT
CGCCTTCATGCTGGGTAGCGCCACGTCTCTGCCCGCCGTCGAGTATTTCT
GTCTGTACGCCGGCACCGCCATCCTCTTCGACTTCGGCATGCAGACACTT
CTATGACGAATTTTTTCGCCTTCATGCTGGGTAGCGCCACGTCTCTGCCC
GCCGTCGAGTATTTCTGTCTGTACGCCGGCACCGCCATCCTCTTCGACTT
CGGCATGCAGATCACGGCGTTCGTCGCTTGTCTAGCAATGGATGCGAACC
GGCAGAAGGCGGGCAGGATGGACTGGCTCTGCTGCTTCAAGGGAGATTCT
CGATACGCCGAGTTAGATAAAGAGATCACGGCGTTCGTCGCTTGTCTAGC
AATGGATGCGAACCGGCAGAAGGCGGGCAGGATGGACTGGCTCTGCTGCT
TCAAGGGAGATTCTCGATACGCCGAGTTAGATAAAGAG
back to top