mRNA_L-elsbetiae_contig74.16283.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.370e-100 Identity = 189/274 (68.98%), Postives = 206/274 (75.18%), Query Frame = 1 Query: 295 YVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLL-DDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEEDAEADSNGARIVDSSAMNAADDIE--AAEGRRPSVVEHPVRTNV 1107 YVILDYTVPGLGFVAD L SFLEWVEDNPGLGA+AFA VY+FTTV FIPGSLLTLG+GLVFGRAL LAFLLGRFVLQ+QAQGLFNKFKVLKAV+RAI++QGLKLVILLRLSPVVPFSAFNYVMGVT V FRDYA+GCVG IPGTVAFVFIGTTASGLL DD XXXXXXXXX +ATVIAVVLISIY+KRALNKVLEED + + S +++E A +G RP+VVEH VR V Sbjct: 57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEED-RVEQEALEMGLESGNGGMNNMEQSAQDGARPAVVEHAVRMPV 329
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 257 bits (656), Expect = 3.020e-80 Identity = 184/263 (69.96%), Postives = 213/263 (80.99%), Query Frame = 1 Query: 238 KQQKLIKAGLLFGLALVIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXX------------VATVIAVVLISIYSKRALNKVLEEDAE 990 ++ KLIK GLL L +IIYV+LDYT+P LG V IL SFL WVE++PG G VAFA+VY+ TTV FIPGS+LTLG+GLVFGRALXXXXXXXXXXXXXXXXXXXXXX+AFLLGR+VLQD AQ LFNKF VLKAVD+AIE +GL+LVILLRLSPV+PFSAFNYVMG+T V FR Y LGCVGM+PGTVA+VFIGT+A+GLL D XXXXXXXXXXXXXXX ATV+AVVLI++ S+RAL +VL ++AE Sbjct: 44 RKNKLIKFGLLSLLVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLMKEAE 306
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 238 bits (608), Expect = 5.970e-73 Identity = 138/261 (52.87%), Postives = 172/261 (65.90%), Query Frame = 1 Query: 238 KQQKLIKAGLLFGLALV--IIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLD-----------DXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEE 981 K++K+ K L GL LV IIYVI+DY+VP LG V +L FL WVEDNP G AFA VY+F TVAFIPGSLLTLG+GLVFGRAL +AF+LGR+VLQD AQ LFNKFK+++AVD+AIE+QGLKL +LLRLSPVVPF+AFNY+MG+TA+ +DY +GC+G+IPGTVA+VFIG++ASG+ D +ATVIAV LIS Y+K+ALN++L E Sbjct: 20 KKEKIRK--LCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNE 278
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.980e-48 Identity = 98/250 (39.20%), Postives = 145/250 (58.00%), Query Frame = 1 Query: 244 QKLIKAGLLFGLALVIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEEDAEA 993 +KL+ A +L G I++VI+D T G ++ D +++FL W+E+NP G F VY+ TV F+PG +LTLG+G VF A LAFL+ R++L++ A GL KF + +A+D+A+E +GLK++ILLRLSPV+PF+A NYV GVTAV F+DY+L M+PGT+ +VF+G +A L V ++AV L S Y+K+ LNK+L+++ EA Sbjct: 17 KKLVLALVLIGF---IVFVIIDSTTNG--YIKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLAT------IGSSTDSKALTISTVVVGVVLGIVAVALSSRYAKKELNKILDQEEEA 255
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A0G4EY60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EY60_VITBC) HSP 1 Score: 171 bits (432), Expect = 1.820e-46 Identity = 99/234 (42.31%), Postives = 137/234 (58.55%), Query Frame = 1 Query: 286 VIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEEDA 987 +I+Y+I+D T VA+ L F EWV+DNP G +A+ AVY+ TVAFIPGS+LTLG+G F A LAF GRF+ + QGL +KFKV++A+D+ ETQGLKL ILLRLSPVVPFSAFNY+MG T ++RDYA+G +G+IPGT +V+IG + VAT IAV +++ ++++AL ++ E++A Sbjct: 65 IIVYIIIDSTTGQR--VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPA----FAGACSGKAEGSGHWSQWVFLAVGLVATFIAVFIVTWFARKALREITEKEA 292
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 170 bits (431), Expect = 4.000e-46 Identity = 93/237 (39.24%), Postives = 140/237 (59.07%), Query Frame = 1 Query: 346 LKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXX-VATVIAVVLISIYSKRALNKVLEEDAEADSNGARIVDSSAMNAADDIE 1053 L++ EW+EDNP G V FA ++ +T+ F+PG LLT+G+G+ FGRAL +AF LGR+VL +QAQ ++++L AV+ AIE G+K++ILLRLSP+VPFS FN++ G+T V RDY LG VG++PGT+AFV+IG + +G +++ VA V+A+V ++IY++RAL + L E E D+N + + +A D+E Sbjct: 93 LETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVES-ELDANADKEEKAEHEGSATDVE 328
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A6U4ITL6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4ITL6_9STRA) HSP 1 Score: 170 bits (431), Expect = 7.100e-46 Identity = 119/266 (44.74%), Postives = 161/266 (60.53%), Query Frame = 1 Query: 205 EQEETTATPPTKQQKLIKAGLLFGLALVIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEEDAEADSN 1002 E E AT + K I GL+ L ++IY+I+D T +VA ++ FL+W EDNP G AF VY TV F+PGS+LTLG+G VF A AFLLGR++L+ G +K+K+ KA+D+A+ET G +++ LLRLSPV+PF+A NY+ GVTA+ F YA + ++PGT+ F F+G TA L D XXXXXXXXXXXXXXXX V+A+V++S Y+K+ LNK+LEE E DS+ Sbjct: 64 EDPEANATRKKARVKKIIIGLI--LLGIVIYIIVDSTTNR--YVAQGIQIFLKWFEDNPVAGLFAFMGVYFLATVMFVPGSILTLGAGFVFANAFGLGWGVLLATVAVFCGAVAGDLTAFLLGRYLLRGWVLGWTDKYKIFKAIDKALETNGFRIMSLLRLSPVIPFNAINYIAGVTAISFSAYAWANLFILPGTILFCFLGATAGSLADSGASXXXXXXXXXXXXXXXXFG------VLAIVVVSFYAKKELNKILEEQNEEDSS 319
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 166 bits (421), Expect = 5.730e-45 Identity = 94/246 (38.21%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 247 KLIKAGLLFGLALVIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEED 984 K+I +L GL I+++I+D G FV ++ L+W+E+NP G F AVY TV F+PGSLLTLGSG VF + +AF+LGR++L+D + L K+ V +A+D+A+E +GL+++ILLRLSP++PF+A NY+ GVT+V F+ YA ++PGT+ FVF+G +A L+D V VIA+ L S Y+K+ LNK+LE++ Sbjct: 46 KIIVGLVLVGL---IVFIIVDSVTHG--FVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGASAGSLVDSGNGGDTPVVTIATIVVGV------VFGVIAIALTSRYAKKELNKILEQE 280
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.150e-44 Identity = 105/293 (35.84%), Postives = 160/293 (54.61%), Query Frame = 1 Query: 220 TATPPTKQQK-LIKAGLLFGLALV--IIYVILDY--TVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGSLLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGLLDDXXXXXXXXXXXXXXXXXXXXXXXXVATVIAVVLISIYSKRALNKVLEEDAEADSNGARIVDSSAMNAADDIEAAEGRRPSVV 1083 T TPPT ++ L K G FGL LV IIYVI+D T + VAD FL+W+EDNP G AF VYI ++ FIPG +LTLG+G VF AL +FL+GR++L+D L K + +A+D A++ +GL+++ILLR+SP+VPF+ FNYV GVT++ RDYA+G +G++PGT+ ++ +G++A L+D V V+ V + Y+K+ LNK+L + E ++A + D++++ G+ S + Sbjct: 16 TQTPPTSRRAFLFKIG--FGLILVGFIIYVIIDLATTKNTMRIVAD----FLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLVDSSSSGNDSTVRIISIVLGI------VFAVLGVYATTYYAKKELNKILSQRREV---------NAAASTEGDVDSSNGKGASTI 287
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Match: A0A7S3XRA4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRA4_HETAK) HSP 1 Score: 160 bits (404), Expect = 8.030e-44 Identity = 82/194 (42.27%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 253 IKAGLLFGLALVIIYVILDYTVPGLGFVADILKSFLEWVEDNPGLGAVAFAAVYIFTTVAFIPGS--LLTLGSGLVFGRALXXXXXXXXXXXXXXXXXXXXXXLAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMIPGTVAFVFIGTTASGL 828 +K L LA +++Y++LDY + GLG+ + FL+WV +P G AFAAVYI T+ PG+ LT+ SG++FG+A + F +GR +L+++AQ LFN++K+LKA+D AIE +GLKL+ LLRLSPVVP++ FNY++GVT V+ +D+ +GC+G+IP T A ++G +A+ L Sbjct: 1 MKGAALALLATLLLYIVLDYNLEGLGYFQRAMVDFLDWVNGHPVEGIFAFAAVYILITLPGFPGAGIALTISSGVLFGQAFGEGMGILLATTSVFIGGSIGGIMCFKIGRLLLREKAQKLFNRYKLLKAIDMAIEKEGLKLIFLLRLSPVVPWATFNYLLGVTRVRTKDFVVGCLGLIPITAAQAYLGISAASL 194 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig74.16283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig74.16283.1 >prot_L-elsbetiae_contig74.16283.1 ID=prot_L-elsbetiae_contig74.16283.1|Name=mRNA_L-elsbetiae_contig74.16283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=373bp SSTRALDTHTPPPLPLPLPTPHLHRVSSLFNTRDKCSSTAAEAAPSNACSback to top mRNA from alignment at L-elsbetiae_contig74:61301..63290- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig74.16283.1 ID=mRNA_L-elsbetiae_contig74.16283.1|Name=mRNA_L-elsbetiae_contig74.16283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1990bp|location=Sequence derived from alignment at L-elsbetiae_contig74:61301..63290- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig74:61301..63290- >mRNA_L-elsbetiae_contig74.16283.1 ID=mRNA_L-elsbetiae_contig74.16283.1|Name=mRNA_L-elsbetiae_contig74.16283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2238bp|location=Sequence derived from alignment at L-elsbetiae_contig74:61301..63290- (Laminarionema elsbetiae ELsaHSoW15)back to top |