mRNA_L-elsbetiae_contig74.16280.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig74.16280.1
Unique NamemRNA_L-elsbetiae_contig74.16280.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig74.16280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig74contigL-elsbetiae_contig74:15833..17775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1043
Cds size1041
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816824.1464856-CDS-L-elsbetiae_contig74:15832..158881622816824.1464856-CDS-L-elsbetiae_contig74:15832..15888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig74 15833..15888 +
1691683841.143035-CDS-L-elsbetiae_contig74:15832..158881691683841.143035-CDS-L-elsbetiae_contig74:15832..15888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig74 15833..15888 +
1622816824.1566637-CDS-L-elsbetiae_contig74:16788..177731622816824.1566637-CDS-L-elsbetiae_contig74:16788..17773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig74 16789..17773 +
1691683841.1525526-CDS-L-elsbetiae_contig74:16788..177731691683841.1525526-CDS-L-elsbetiae_contig74:16788..17773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig74 16789..17773 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig74.16280.1prot_L-elsbetiae_contig74.16280.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig74 15833..17773 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig74.16280.1

>prot_L-elsbetiae_contig74.16280.1 ID=prot_L-elsbetiae_contig74.16280.1|Name=mRNA_L-elsbetiae_contig74.16280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
AEFCAENKREGTVNVGDKRSKKTLKFYAQHTESRPMRCCHRDGCNKRPSY
GVEGSKVKEFCVQHKKEGMVDVASKKRKTCGQPSCSKRRSYGVEGSKTPE
LCAKHKQEGMVNVVDKRCGHPRCNKHPSYGMEGGKTAEFCSQHKKEGMVN
VVDKKKRCGHPSCNRYPLCGIEGSKTAEFCVEHKKEGMVNVASKRCGHPG
CNKHPTYGIEGSKTVEFCAGHAKKGMSTVKRNGCGHPGCNKYPSYGMEGS
KTAEVCAEHKKDSMVNIISKRCGHSSCNKQPSYGMEGSQCKEFCAGHAKE
GMVSVVSKRCGHPSCNKQRRYGMEGSKSKEFCADHAKEGMVAIKNKR
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mRNA from alignment at L-elsbetiae_contig74:15833..17775+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig74.16280.1 ID=mRNA_L-elsbetiae_contig74.16280.1|Name=mRNA_L-elsbetiae_contig74.16280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1943bp|location=Sequence derived from alignment at L-elsbetiae_contig74:15833..17775+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGAGTTCTGCGCTGAAAACAAGAGAGAGGGCACAGTGAACGTCGGCGA
CAAGAGGTGTGGCCAACATGGAAAATGCAGCAAGGTTGTCAGTGTCCTTT
ACTCGTTTTGCCCCCCCCCCCCCCCCCCCCGCTCCTGGCGACGCGCTGAA
AGGCCAGGTTGGTTGAGTTGAAAGAACCTTCCCCTGTGCTACCCGAGGGT
GTAGAAGAAAGAAGGCGCGAGTCGAGGCTCCGTGGCGGAGTAGGTACTTT
CAGGCGTTAGCGTGAGTGGCTTGCAGTCGAAAACACGGTCATAGACAACT
ACATGCTCTGTAGATGTAGATGTTCTAGATGCCTCTTCGGTACGCCCTCT
GGCACCATGCGCCAGCCCTCGGAGCCAGCATGCTCCATCCCTGACGATCC
AAAGCACAGCATAACAACTTACTGCTCATAGTTAATGTCGGTGCAGATTT
TAGACCCGAATCGCTCTGCGAGTGTCGAATTAGAGGTGCCTTCAACAAGT
TGGTGCGCTCGGCCAGGCCAGTAAGTAGCAAGGGTTAAGTGCCTGCAACG
AGTTAGCTACTGACCAGGGAGTGCTCTGATCTTGCCGATCCGATATGTAT
GTGTAGTTTCCTGGTGGATCTTGACGCTCTGTTAACGCAAAAGATCGTGC
TGCAGTCTGTCTCCCAACTTATGGCTCGTTCTCTCGCCTTCGTCTCTCTC
TTCCTTGCTTAAATTGTTAGTGTGATGCCAAGCATTTGTGCGCTGCAAAA
ACTACCGCCCAAAAGTTTGATCACGTCTGTATCTAGTAACACATCTCAAC
TACACAGTCTCAAAGTCGTGTTTTGGACTACTCTCTGCAAGCTGAGATAT
CTGCTTCTCCGTGCCTGGGTGCACTGAGGGCCTATGTTTCGCTGTCCCCG
GATGTCCCGACCTCAAAAAATAAAAATCCACCCGGTATGTGCCTCCTTAA
AACCAGGAGTAAAAAAACACTGAAGTTCTACGCTCAACACACGGAGAGTA
GACCTATGAGGTGCTGCCACCGTGATGGTTGCAACAAGCGGCCGTCGTAC
GGTGTGGAGGGTAGCAAGGTGAAGGAATTCTGCGTTCAACACAAGAAGGA
GGGCATGGTGGATGTAGCCAGCAAGAAGAGGAAGACGTGCGGCCAACCTA
GTTGCAGCAAGCGTCGATCGTACGGAGTAGAAGGTAGCAAGACGCCGGAG
CTCTGCGCTAAACACAAGCAAGAGGGCATGGTGAACGTCGTGGACAAGAG
GTGTGGCCATCCTCGTTGCAACAAGCACCCATCGTACGGCATGGAAGGTG
GCAAGACGGCGGAGTTCTGCAGTCAACACAAGAAGGAGGGGATGGTGAAT
GTCGTTGACAAGAAGAAGAGGTGCGGCCACCCCAGTTGCAACAGGTACCC
GTTGTGCGGCATAGAAGGTAGCAAGACAGCGGAGTTCTGCGTTGAACACA
AAAAGGAGGGCATGGTAAACGTCGCCAGCAAGAGGTGCGGCCACCCTGGT
TGCAACAAGCACCCGACGTACGGCATAGAAGGTAGCAAGACAGTGGAGTT
CTGCGCTGGGCACGCGAAGAAAGGCATGTCGACTGTCAAGCGCAACGGGT
GCGGCCACCCCGGTTGCAACAAGTATCCGTCGTATGGCATGGAAGGTAGC
AAGACAGCGGAGGTCTGTGCTGAACACAAGAAGGATAGTATGGTGAACAT
CATCAGCAAGAGGTGTGGCCACTCTAGTTGCAACAAGCAGCCGTCGTACG
GCATGGAGGGTAGCCAGTGCAAGGAGTTCTGCGCTGGACATGCGAAGGAG
GGCATGGTGAGCGTTGTCAGCAAGCGGTGTGGCCATCCTAGTTGTAACAA
ACAGCGGAGGTATGGCATGGAAGGTAGCAAGAGCAAGGAGTTTTGCGCTG
ACCACGCGAAAGAAGGAATGGTAGCCATCAAGAACAAGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig74:15833..17775+

>mRNA_L-elsbetiae_contig74.16280.1 ID=mRNA_L-elsbetiae_contig74.16280.1|Name=mRNA_L-elsbetiae_contig74.16280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig74:15833..17775+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGAGTTCTGCGCTGAAAACAAGAGAGAGGGCACAGTGAACGTCGGCGA
CAAGAGGCGGAGTTCTGCGCTGAAAACAAGAGAGAGGGCACAGTGAACGT
CGGCGACAAGAGGAGTAAAAAAACACTGAAGTTCTACGCTCAACACACGG
AGAGTAGACCTATGAGGTGCTGCCACCGTGATGGTTGCAACAAGCGGCCG
TCGTACGGTGTGGAGGGTAGCAAGGTGAAGGAATTCTGCGTTCAACACAA
GAAGGAGGGCATGGTGGATGTAGCCAGCAAGAAGAGGAAGACGTGCGGCC
AACCTAGTTGCAGCAAGCGTCGATCGTACGGAGTAGAAGGTAGCAAGACG
CCGGAGCTCTGCGCTAAACACAAGCAAGAGGGCATGGTGAACGTCGTGGA
CAAGAGGTGTGGCCATCCTCGTTGCAACAAGCACCCATCGTACGGCATGG
AAGGTGGCAAGACGGCGGAGTTCTGCAGTCAACACAAGAAGGAGGGGATG
GTGAATGTCGTTGACAAGAAGAAGAGGTGCGGCCACCCCAGTTGCAACAG
GTACCCGTTGTGCGGCATAGAAGGTAGCAAGACAGCGGAGTTCTGCGTTG
AACACAAAAAGGAGGGCATGGTAAACGTCGCCAGCAAGAGGTGCGGCCAC
CCTGGTTGCAACAAGCACCCGACGTACGGCATAGAAGGTAGCAAGACAGT
GGAGTTCTGCGCTGGGCACGCGAAGAAAGGCATGTCGACTGTCAAGCGCA
ACGGGTGCGGCCACCCCGGTTGCAACAAGTATCCGTCGTATGGCATGGAA
GGTAGCAAGACAGCGGAGGTCTGTGCTGAACACAAGAAGGATAGTATGGT
GAACATCATCAGCAAGAGGTGTGGCCACTCTAGTTGCAACAAGCAGCCGT
CGTACGGCATGGAGGGTAGCCAGTGCAAGGAGTTCTGCGCTGGACATGCG
AAGGAGGGCATGGTGAGCGTTGTCAGCAAGCGGTGTGGCCATCCTAGTTG
TAACAAACAGCGGAGGTATGGCATGGAAGGTAGCAAGAGCAAGGAGTTTT
GCGCTGACCACGCGAAAGAAGGAATGGTAGCCATCAAGAACAAGAGGGAG
TAAAAAAACACTGAAGTTCTACGCTCAACACACGGAGAGTAGACCTATGA
GGTGCTGCCACCGTGATGGTTGCAACAAGCGGCCGTCGTACGGTGTGGAG
GGTAGCAAGGTGAAGGAATTCTGCGTTCAACACAAGAAGGAGGGCATGGT
GGATGTAGCCAGCAAGAAGAGGAAGACGTGCGGCCAACCTAGTTGCAGCA
AGCGTCGATCGTACGGAGTAGAAGGTAGCAAGACGCCGGAGCTCTGCGCT
AAACACAAGCAAGAGGGCATGGTGAACGTCGTGGACAAGAGGTGTGGCCA
TCCTCGTTGCAACAAGCACCCATCGTACGGCATGGAAGGTGGCAAGACGG
CGGAGTTCTGCAGTCAACACAAGAAGGAGGGGATGGTGAATGTCGTTGAC
AAGAAGAAGAGGTGCGGCCACCCCAGTTGCAACAGGTACCCGTTGTGCGG
CATAGAAGGTAGCAAGACAGCGGAGTTCTGCGTTGAACACAAAAAGGAGG
GCATGGTAAACGTCGCCAGCAAGAGGTGCGGCCACCCTGGTTGCAACAAG
CACCCGACGTACGGCATAGAAGGTAGCAAGACAGTGGAGTTCTGCGCTGG
GCACGCGAAGAAAGGCATGTCGACTGTCAAGCGCAACGGGTGCGGCCACC
CCGGTTGCAACAAGTATCCGTCGTATGGCATGGAAGGTAGCAAGACAGCG
GAGGTCTGTGCTGAACACAAGAAGGATAGTATGGTGAACATCATCAGCAA
GAGGTGTGGCCACTCTAGTTGCAACAAGCAGCCGTCGTACGGCATGGAGG
GTAGCCAGTGCAAGGAGTTCTGCGCTGGACATGCGAAGGAGGGCATGGTG
AGCGTTGTCAGCAAGCGGTGTGGCCATCCTAGTTGTAACAAACAGCGGAG
GTATGGCATGGAAGGTAGCAAGAGCAAGGAGTTTTGCGCTGACCACGCGA
AAGAAGGAATGGTAGCCATCAAGAACAAGAGG
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