mRNA_L-elsbetiae_contig7399.16277.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE) HSP 1 Score: 200 bits (509), Expect = 6.190e-62 Identity = 105/139 (75.54%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 YNSLLESRPLATKAVTSGAIAFAGD++CQ+LA++VA REEE + + +DH++ G + VASEIDWGRT+RFTFVGA V+APALH WYGFLIR LPGTAPATVVKRVALDQLLFAPVFL VFLSTVMLLDG A Sbjct: 73 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQH-VDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNA 210
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI) HSP 1 Score: 193 bits (490), Expect = 5.450e-60 Identity = 106/141 (75.18%), Postives = 119/141 (84.40%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPER-TDENDHDRDHLLHGLGTS-DVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 YNSLLESRPLATKAVTSGAIAFAGD++CQ+LA++VA REEE++ + DE +H H G G + VASEIDWGRT+RFTFVGA V+APALH WYGFLI+ LPGTAPATVVKRVALDQLLFAP FL VFLSTVMLLDG A Sbjct: 2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEH---HEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNA 139
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: L1JK07_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JK07_GUITC) HSP 1 Score: 102 bits (255), Expect = 1.100e-24 Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 1 YNSLLESRPLA---TKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPER-TDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y +LL+S+ + TKAVTS AIAFAGD+ CQ + E QT ++ T E H ++ + + IDW R FT +G ++AP LH WYGFL R +PGT A KRV LDQ FAP F+ VF+S+V LDGK+ Sbjct: 6 YQALLQSKGIVGIGTKAVTSAAIAFAGDVFCQTVL-------ERQTAQQWTGELSH-----MNKTESKMQVTTIDWKRLSNFTLLGGVLVAPTLHYWYGFLGRAVPGTNFAAAFKRVFLDQAFFAPSFIAVFISSVNALDGKS 136
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: W2Q4U2_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q4U2_PHYPN) HSP 1 Score: 102 bits (255), Expect = 2.150e-24 Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y SLLE+ PL+TK VT GAIA GD+ CQ++ L + D +++D R FTF+G +++PALHVWYGFL LPG + A V KR+ALDQL FAP FL + LS+V++L+G + Sbjct: 45 YASLLETHPLSTKIVTGGAIAGLGDVGCQLV-----------------------------LESEDGDAKLDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHS 154
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A484DWD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWD7_BRELC) HSP 1 Score: 101 bits (252), Expect = 6.140e-24 Identity = 60/139 (43.17%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y SLL + PL+TK VT G IA GD+ CQ+L ER D ++ D RT FTF+G ++P LHVWYGFL LPG + AT+ KR+ LDQ++FAPVFL +FLS+V L+G A Sbjct: 45 YASLLVTHPLSTKIVTGGTIAGLGDIGCQVLL----------EGERKD-------------------AKFDLKRTAIFTFLGGVAVSPILHVWYGFLGSRLPGISKATITKRLVLDQIIFAPVFLSIFLSSVQALEGHA 154
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT) HSP 1 Score: 101 bits (252), Expect = 6.410e-24 Identity = 61/139 (43.88%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y SLLE+ PL TK VT GAIA GD+ CQ+ +L G D +++D RTV FTF+G +++P LHVWYGFL LPG + + V KR+ALDQL FAP FL + LS+V+ L+G A Sbjct: 45 YASLLETHPLKTKIVTGGAIAGLGDVGCQL--------------------------VLEG---EDGDAKLDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHA 154
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A0P1ASJ6_PLAHL (Peroxisomal membrane mpv17 pmp22-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASJ6_PLAHL) HSP 1 Score: 100 bits (249), Expect = 1.950e-23 Identity = 58/139 (41.73%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y SLLE+ P++TK VT G IA GD+ CQ+ L + D +++D RT FTF+G V++P LHVWY FL LPG + A + KR+ALDQL FAP FL +FLS+V+ L+G A Sbjct: 45 YASLLETHPISTKIVTGGTIAGLGDVGCQLF-----------------------------LESDDGHAKLDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGHA 154
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A329SFZ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFZ2_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.110e-23 Identity = 60/139 (43.17%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGKA 417 Y SLLE+ PL TK VT GAIA GD+ CQ++ L D + D RT FTF+G +++P LHVWYGFL LPG + V KR+ALDQL FAP FL V LS+V+ L+G A Sbjct: 38 YASLLETHPLRTKIVTGGAIAGLGDVGCQLV-----------------------------LEVEDDDARFDVKRTAIFTFLGGFLISPVLHVWYGFLGSRLPGVSTTAVAKRLALDQLGFAPTFLPVILSSVLALEGHA 147
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A662Y1B5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1B5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.320e-23 Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDG 411 Y +LLE+ PL+TK VT GAIA AGD++CQ+ D+N + D R FTF+G +++P LHVWYGFL + +PG + +VKR+ALDQL+FAP FL VF S+++ L+G Sbjct: 42 YATLLETHPLSTKIVTGGAIAGAGDVSCQLFI-------------EADDN-----------------GKFDVKRAAIFTFLGGALISPVLHVWYGFLGKLVPGVSSRAIVKRLALDQLVFAPTFLCVFFSSLLTLEG 148
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.910e-23 Identity = 62/138 (44.93%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENDHDRDHLLHGLGTSDVASEIDWGRTVRFTFVGATVLAPALHVWYGFLIRTLPGTAPATVVKRVALDQLLFAPVFLGVFLSTVMLLDGK 414 Y SLLE+ PL+TK T GAIA GD+ CQ+ V +E+ P LL D R FTF+G +++P LHVWYGFL LPG + A V KR+ALDQL FAP FL VFLS+V+ L+G Sbjct: 40 YTSLLETHPLSTKIATGGAIAGLGDMGCQL----VLEEKEKHKP------------LL------------DVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGN 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7399.16277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7399.16277.1 >prot_L-elsbetiae_contig7399.16277.1 ID=prot_L-elsbetiae_contig7399.16277.1|Name=mRNA_L-elsbetiae_contig7399.16277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp YNSLLESRPLATKAVTSGAIAFAGDLTCQMLAIQVATREEEQTPERTDENback to top mRNA from alignment at L-elsbetiae_contig7399:1587..2337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7399.16277.1 ID=mRNA_L-elsbetiae_contig7399.16277.1|Name=mRNA_L-elsbetiae_contig7399.16277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=751bp|location=Sequence derived from alignment at L-elsbetiae_contig7399:1587..2337- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7399:1587..2337- >mRNA_L-elsbetiae_contig7399.16277.1 ID=mRNA_L-elsbetiae_contig7399.16277.1|Name=mRNA_L-elsbetiae_contig7399.16277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig7399:1587..2337- (Laminarionema elsbetiae ELsaHSoW15)back to top |