mRNA_L-elsbetiae_contig7394.16271.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7394.16271.1
Unique NamemRNA_L-elsbetiae_contig7394.16271.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 3.890e-95
Identity = 153/224 (68.30%), Postives = 186/224 (83.04%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLYKVIPKGSPKGEEREHGIRGG 672
            P+F +  S+   +Q+ RCGLL VVMLVSGGV+L+FSGQ +D +E+ P++GFLLTLLSGMLAG KWTLSQVLLQGRG +G+GA+TVGEHIHPFTLLHYMS+SSAA+LVPF L LELG+L EM+ TF   R  KT L+IV  SLLA +LVL EF+FI++VSSLSLCII V+KELLLV++SV V GEHLS RTGLGFFVTM+GVTLYK++PKG P+    ++G  GG
Sbjct:  184 PIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRSDQEENFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGKGAITVGEHIHPFTLLHYMSLSSAASLVPFALTLELGSLHEMAVTFSGHRMVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMVGVTLYKLVPKGPPQDLTLKNGGGGG 407          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.260e-94
Identity = 158/225 (70.22%), Postives = 187/225 (83.11%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLYKVIPKGSPKGEEREHGIRGGG 675
            P+F +  S+   +Q+ RCGLL VVMLVSGGV+L+FSGQ  D +ED P++GFLLTLLSGMLAG KWTLSQVLLQGRG +GRGA+TVGEHIHPFTLLHYMS+SSAA+LVPF LALELGAL EM+ TF   R  KT L+IV  SLLA +LVL EF+FI++VSSLSLCII V+KELLLV++SV V GEHLS RTGLGFFVTM+GVTLYK++PKG P+    ++G  GGG
Sbjct:  392 PIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRNDQEEDFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAITVGEHIHPFTLLHYMSLSSAASLVPFALALELGALHEMAVTFSGHRIVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMIGVTLYKLVPKGPPQHLSLKNG--GGG 614          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: UPI000C6CCF18 (solute carrier family 35 member C2-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CCF18)

HSP 1 Score: 89.4 bits (220), Expect = 2.370e-17
Identity = 53/200 (26.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:    4 MFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGV 603
            +F +  S++  ++  RC L+ VV+L++ G+  MF+ Q T       ++GFLL L +  LAGF+WTL+Q+++Q +       + +  H+ P+ +L  + +S A   +P   + ++   R+++         +T   + + S+LA ++ LTE+  ++  SSL+L I G++KE+  +  ++   G+ ++    +G  + +LG+
Sbjct:  151 VFILMFSLIFGLEKKRCSLVAVVLLIAVGL-FMFTYQSTQFN----LQGFLLVLSASFLAGFRWTLAQLVIQKKEIGLGNPIDMMYHMQPWMILGLLPLSIAFEGIPISTSEKVFRYRDVAVV------TRTLTCVFVGSMLAFLMELTEYLLLRYTSSLTLSITGIIKEIFTLYLAIHYNGDSMTTMNYIGLVICVLGI 339          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A0V0I3S4_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0I3S4_SOLCH)

HSP 1 Score: 87.8 bits (216), Expect = 2.540e-17
Identity = 59/221 (26.70%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTL-----YKVIPKGSPKGEE 648
            P+F +  +    ++ P   LLG+++++S G+ L  +      + +    GF+  +L+ +++GF+WT++Q+LLQ   +  +  LT+  ++ P      M++S+A   + F    E G+     S++   R+C   LL++    LA  +VLTE+  +   S++++ I GV+KE + ++ +V    +  +   G+G    MLGV+L     Y  + KG+P  +E
Sbjct:   26 PIFLLFFAFAFRLESPSVKLLGIILVISVGILLTVA-----KETEFEFWGFVFVMLAAVMSGFRWTMTQILLQKEAYGLKNPLTLMSYVTPV-----MALSTAMLSLIFDPWQEFGSSSYFDSSWHITRSC---LLMLFGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDKFTWMKGVGLMTIMLGVSLFNWYKYDKLQKGNPSEDE 233          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A3Q7I9Y9_SOLLC (TPT domain-containing protein n=8 Tax=Solanoideae TaxID=424551 RepID=A0A3Q7I9Y9_SOLLC)

HSP 1 Score: 85.1 bits (209), Expect = 2.560e-16
Identity = 58/221 (26.24%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLYKV-----IPKGSPKGEE 648
            P+F +  +    ++ P   LLG+++++S GV L  +      + +    GF+  +L+ +++GF+WT++Q+LLQ   +  +  LT+  ++ P      M++S+A   + F    E G+     S++   R+C   LL++    LA  +VLTE+  +   S++++ I GV+KE + ++ +V    +  +   G+G    M GV+L+ +     + KG+P  +E
Sbjct:   26 PIFLLLFAFAFRLESPSLKLLGIMLIISIGVLLTVA-----KETEFEFWGFIFVMLAAVMSGFRWTMTQILLQKEIYGLKNPLTLMSYVTPV-----MALSTAMLSLIFDPWQEFGSSSYFDSSWHITRSC---LLMLFGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDKFTWMKGVGLITIMFGVSLFNLYKYDKLQKGNPNEDE 233          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A6P5SMB9_PRUAV (probable sugar phosphate/phosphate translocator At1g06470 isoform X2 n=2 Tax=Prunus TaxID=3754 RepID=A0A6P5SMB9_PRUAV)

HSP 1 Score: 85.1 bits (209), Expect = 3.620e-16
Identity = 60/226 (26.55%), Postives = 115/226 (50.88%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTL-----YKVIPKGSPKGEEREHGI 663
            P+F +  +    ++ P   L G+++++S G+ L  S      + +  + GF+  +L+ +++GF+W ++Q+LLQ   +  +  LT+  ++ P      M++ +A   + F    EL      ++     R+C   LL++    LA  +VLTEF  +   S++++ I GV+KE L +L +V    +  +   G G F+ MLGV+L     Y+ I KG    ++ E  +
Sbjct:   49 PIFLLLFAFAFRLEAPSVRLSGIILIISIGILLTVS-----KETEFDLWGFIFVMLAAVMSGFRWCMTQILLQKEAYGLKNPLTLMSYVTPV-----MAVVTALLSLVFDPWDELRRNNYFNNPAHISRSC---LLMLFGGTLAFFMVLTEFILVSVTSAVTVTIAGVVKEALTILVAVIYFHDEFTRLKGAGLFIIMLGVSLFNWYKYEKIKKGQTSEDDMEESV 261          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A1S3YEN4_TOBAC (probable sugar phosphate/phosphate translocator At1g06470 n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S3YEN4_TOBAC)

HSP 1 Score: 85.5 bits (210), Expect = 1.170e-15
Identity = 58/204 (28.43%), Postives = 111/204 (54.41%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLY 612
            P+F +  +    ++ P   LLGV++++S G+ L    + T+ Q      GF+  +L+ +++GF+WT++Q+LLQ   +  +  LT+  ++ P      M++S+A   + F    E G+ +   S++   R+C   LL++    LA  +VLTE+  +   S++++ I GV+KE + +L +V    +  +   GLG    M GV+L+
Sbjct:  263 PIFLLFFAFAFRLESPSLKLLGVILIISVGI-LFTVAKETEFQ----FWGFVFVMLAAVMSGFRWTMTQILLQKEVYGLKNPLTLMSYVTPV-----MALSTAVLSLIFDPWYEFGSTKYFDSSWHIARSC---LLMLFGGTLAFFMVLTEYILVSITSAVTVTIAGVVKEAVTILVAVFYFHDEFTWMKGLGLMTIMFGVSLF 453          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A6I8N9X8_ORNAN (TPT domain-containing protein n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8N9X8_ORNAN)

HSP 1 Score: 84.0 bits (206), Expect = 1.490e-15
Identity = 62/214 (28.97%), Postives = 106/214 (49.53%), Query Frame = 1
Query:    4 MFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLYKVIPKGSPKGE 645
            +F +  S++  +++PR GL+ VV+LV+ G+ L F+ + T    D    GF L L +  + G +WTL+Q+LLQ      +  +    H+ P   L    + +A      V  L L   R++    GA         ++   LLA  L  +EF  + + SSL+L I G+ KE+  +L +    G+ ++    LGF + + G++L+  +   S KGE
Sbjct:    8 LFILMFSLIFRLEEPRAGLVLVVVLVAAGLFL-FTYKSTQFDAD----GFALVLAASFVGGARWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAA------VEGLPLSTSRKLFRAEGAGALAGVLCALLGGGLLAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLMAAHWLGDQINLLNWLGFAICLSGISLHVTLKALSAKGE 210          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A1S3YT21_TOBAC (probable sugar phosphate/phosphate translocator At1g06470 isoform X1 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3YT21_TOBAC)

HSP 1 Score: 84.3 bits (207), Expect = 2.860e-15
Identity = 56/204 (27.45%), Postives = 109/204 (53.43%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTLY 612
            P+F +  +    ++ P   LLG+++++S G+ L  +      + +    GF+  +L+ +++GF+WT++Q+LLQ   +  +  LT+  ++ P      M+IS+A   + F    E G      S++   R+C   LL++    LA  +VLTE+  +   S++++ I GV+KE + +L +V    +  +   G+G    MLGV+L+
Sbjct:  251 PIFLLLFAFAFRIESPSLKLLGIMLIISIGILLTVA-----KETEFQFWGFIFVMLAAVMSGFRWTMTQILLQKEVYGLKNPLTLMSYVTPV-----MAISTAVLSLIFDPWHEFGDNSYFDSSWHITRSC---LLMLFGGTLAFFMVLTEYILVSVTSAVTVTIAGVVKEAVTILVAVFYFHDKFTWMKGVGLLTIMLGVSLF 441          
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Match: A0A7N0TM18_KALFE (TPT domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TM18_KALFE)

HSP 1 Score: 84.0 bits (206), Expect = 2.950e-15
Identity = 58/217 (26.73%), Postives = 113/217 (52.07%), Query Frame = 1
Query:    1 PMFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGFLLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSISSAATLVPFVLALELGALREMSSTFGAD-RACKTALLIVLASLLALVLVLTEFTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGVTL-----YKVIPKGS 633
            P+F +  +    ++ P   LLG+++++S G+ L  S      + D  + GF++ +L+ +++GF+WT++Q+LLQ   +  +         +P T + Y++   AA    F L L+       ++ F +      +++L+     LA  +VLTEF  +   S++++ I GV+KE + +L +V    +  +   G+G F+ M+GV+L     Y  + KGS
Sbjct:  177 PIFLLLFAFSFRLETPSYKLLGIILVISIGILLTVS-----KETDFELSGFIIVMLAAVMSGFRWTMTQILLQKESYGLK---------NPLTFMSYVTPIMAAVTAIFSLILDPWDEFTTNNYFNSSWHTTLSSMLMAFGGALAFFMVLTEFILVSMTSAVTVTIAGVVKEAVTILVAVLYLHDEFTWLKGVGLFIIMVGVSLFNWYKYNKLHKGS 379          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7394.16271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMM1_9PHAE3.890e-9568.30TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FL66_ECTSI1.260e-9470.22TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI000C6CCF182.370e-1726.50solute carrier family 35 member C2-like n=1 Tax=Ce... [more]
A0A0V0I3S4_SOLCH2.540e-1726.70Putative ovule protein n=1 Tax=Solanum chacoense T... [more]
A0A3Q7I9Y9_SOLLC2.560e-1626.24TPT domain-containing protein n=8 Tax=Solanoideae ... [more]
A0A6P5SMB9_PRUAV3.620e-1626.55probable sugar phosphate/phosphate translocator At... [more]
A0A1S3YEN4_TOBAC1.170e-1528.43probable sugar phosphate/phosphate translocator At... [more]
A0A6I8N9X8_ORNAN1.490e-1528.97TPT domain-containing protein n=1 Tax=Ornithorhync... [more]
A0A1S3YT21_TOBAC2.860e-1527.45probable sugar phosphate/phosphate translocator At... [more]
A0A7N0TM18_KALFE2.950e-1526.73TPT domain-containing protein n=1 Tax=Kalanchoe fe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7394contigL-elsbetiae_contig7394:109..4253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.7
Seed ortholog evalue4.4e-78
Seed eggNOG ortholog2880.D7FL66
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP-glucose transmembrane transport
EggNOG OGsCOG0697@1,KOG1443@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-19_005320.1
Exons5
Model size675
Cds size672
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7394.16271.1prot_L-elsbetiae_contig7394.16271.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7394 112..4253 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.5521758-UTR-L-elsbetiae_contig7394:108..1111622816823.5521758-UTR-L-elsbetiae_contig7394:108..111Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7394 109..111 +
1691683840.7746723-UTR-L-elsbetiae_contig7394:108..1111691683840.7746723-UTR-L-elsbetiae_contig7394:108..111Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7394 109..111 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816823.5636597-CDS-L-elsbetiae_contig7394:111..3151622816823.5636597-CDS-L-elsbetiae_contig7394:111..315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 112..315 +
1691683840.787478-CDS-L-elsbetiae_contig7394:111..3151691683840.787478-CDS-L-elsbetiae_contig7394:111..315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 112..315 +
1622816823.5743778-CDS-L-elsbetiae_contig7394:1268..13541622816823.5743778-CDS-L-elsbetiae_contig7394:1268..1354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 1269..1354 +
1691683840.79908-CDS-L-elsbetiae_contig7394:1268..13541691683840.79908-CDS-L-elsbetiae_contig7394:1268..1354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 1269..1354 +
1622816823.5847962-CDS-L-elsbetiae_contig7394:2284..23871622816823.5847962-CDS-L-elsbetiae_contig7394:2284..2387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 2285..2387 +
1691683840.8073337-CDS-L-elsbetiae_contig7394:2284..23871691683840.8073337-CDS-L-elsbetiae_contig7394:2284..2387Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 2285..2387 +
1622816823.594943-CDS-L-elsbetiae_contig7394:3080..31941622816823.594943-CDS-L-elsbetiae_contig7394:3080..3194Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 3081..3194 +
1691683840.8155513-CDS-L-elsbetiae_contig7394:3080..31941691683840.8155513-CDS-L-elsbetiae_contig7394:3080..3194Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 3081..3194 +
1622816823.6046357-CDS-L-elsbetiae_contig7394:4088..42531622816823.6046357-CDS-L-elsbetiae_contig7394:4088..4253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 4089..4253 +
1691683840.8233795-CDS-L-elsbetiae_contig7394:4088..42531691683840.8233795-CDS-L-elsbetiae_contig7394:4088..4253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7394 4089..4253 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7394.16271.1

>prot_L-elsbetiae_contig7394.16271.1 ID=prot_L-elsbetiae_contig7394.16271.1|Name=mRNA_L-elsbetiae_contig7394.16271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
MFDVRCSMVDAVQDPRCGLLGVVMLVSGGVSLMFSGQGTDHQEDLPIEGF
LLTLLSGMLAGFKWTLSQVLLQGRGFFGRGALTVGEHIHPFTLLHYMSIS
SAATLVPFVLALELGALREMSSTFGADRACKTALLIVLASLLALVLVLTE
FTFIKKVSSLSLCIIGVLKELLLVLWSVGVRGEHLSNRTGLGFFVTMLGV
TLYKVIPKGSPKGEEREHGIRGGG
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mRNA from alignment at L-elsbetiae_contig7394:109..4253+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7394.16271.1 ID=mRNA_L-elsbetiae_contig7394.16271.1|Name=mRNA_L-elsbetiae_contig7394.16271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4145bp|location=Sequence derived from alignment at L-elsbetiae_contig7394:109..4253+ (Laminarionema elsbetiae ELsaHSoW15)
CCGATGTTCGACGTCCGATGTTCCATGGTGGATGCTGTGCAGGATCCCCG GTGTGGGCTGTTGGGAGTGGTGATGCTGGTGAGCGGCGGAGTGTCGCTCA TGTTCTCGGGACAGGGAACGGACCACCAGGAAGACCTGCCTATCGAAGGC TTCTTGCTGACGCTGCTGAGTGGGATGCTCGCGGGCTTCAAGTGGACACT CTCTCAGGTAAGTCTTGACTTCGGGTTTTAAGGGTCAGCCCGTAGTTTGC CTGAGGATTGGGCTTCAGGGCTATAGGGTTAGGGTCTGAAGGTTTAAGGG TCAGCCCGTATTGTAGTTTGTCTGAGGGTTAGGCTTCAGGGCTATGGGGT TAGAGCTGGGCTTCGGGTGACAGGGTCAGGCTCAAAGCGGACCCCATATT ACGGTAGGCTCAGGCTTGCAACTTTTTTGGCTGAGGGTCAGACTTAAAAG TGGGCTCTTTCTCGGGTTCAGCAAGTAGGCCTGCTGTTCGAGGTGGTTGA TTTGTTGGTGAGGTCGGGGTTGCCCCGATGGCGTTGGGGGGGGGGGCTGT ATCGCGCTCGTTCTCGCAGTTTTTTTCCTTTTTGCGCACTGTTTATGTCA GAGCCGGGATGCGAGAGGCAGCTGCTTTTGTGCATTGTGTGTAAAATGGT GCCATTGGATAGGGTAAATAGTCTTTCTTTGTATCCGAGTACTCGGCACC ATCGCTGGACTGGACACAGGTGGAGGGGGGCCGACAATATACATGTATGT ACATAGCACGGAACGTACGTCGCGAAACCCCCACCATGCACTTGAGAGGG GCGAGGAGAAGAGAGTCCGAAGGCGGCGATCAAGACAAAACAAAACCAGA AAAATTGCAAGAGAGCACCGCTGCCGGTGCACTTTACCACGTTGCCGACA GTGCCATAAACACGCCTTGCTTTTGGCATGATGGTATGATTCAGCCTTTA CTTTTTCAGCACCAAGGCAGCTTGAGGCAGTTTAAGGCTTTCTCACAGCA GCAGCACCACGCAGCGTCAGCCTGATGCGCTCATTGACGGACAGGCTCGA AACGGAATCGAATACTATAGAGCTTTATTTTTGACAATTACACGCTTGTT GGGATGTTTGAAGATTAACTTGCCGCACCGACCAACGAAGTCGATCGTGT CTCTCATTAGGTGCTGCTGCAAGGAAGGGGTTTTTTCGGGAGGGGCGCGC TGACTGTCGGGGAGCACATCCACCCCTTCACGCTACTCCACTACATGTGA GCGTTACGTCGTTGTCTGGGGTCATTCACAGGCAACATGCAGGCTTTTTT TATGCTTTACTTGCTGTCTACTGGGCCGAACAACCCAGTATGCCAGGCTT TTTTTTGCTTTACTTGCTGTCTATTGGGCCGTATATCCCGGGATGTGGGT ACAACAGTAGTTTTCGTCGCTATTTTTTTCGCTGCAGACTGCTGTCTGTT GCTGTCGTAGGAATTACACTGGCGCTTTTTCAGAGAGCTGATACATGATA CATGATACATGGCGCGCCAGACAGAGCACGTGAACCTAGGCTGCGCAAAG ATGGCGATGGACTACGACAGGAACACTGTGTCGTCGCGGCTGGCATGGTT TGCCGCTGAGGCTGAGGCTACCGTGGGTGACAGAAGATGCCACACACCCT GGATAGATTTTCAAAGCTCGATTCCTCCCCAGCAAGAAGAGTGCCAGTGC CGAAAAGGGCGGCGTTGGAAATATCTAGTCGATAGCTATCCGAAAATGCG TCGTTTGGTGCTGGCACCTTCTTCGTTACGGAGTGATGGGGCTCTAAAAG TCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGAAGTGGGCTATCG CGTCAGCTGGGCCTTGTGGTCGATATCGAAAGAAAAATCAGGAACTTCTC CACATTAAAGAGACAAAAATCAGGAACTACTTGTCCACATTAAAGAGACA AGATTCCTAGGGGTTAGTCACATCGGTACTCTTTTCTTATTGTTAGTTCG GTTCTCTTTGAGATAAAGCTGTTATTTAGGCAAGAGCTGTCTGACTCCCG GAACCAGAGGCCGTGTGCTTTTCTTTACACGCTGCTGGTCTGTGGCTCAT CTGGCTGACGCGTCAGTCCCTCACGCCTGCTTGGGGGTGTGTTGTTCCTG TCTCTGGGGTCTGATTTTGCGGACAGGAGCATTTCGAGCGCTGCTACCTT GGTGCCGTTCGTCTTGGCCCTGGAACTGGGAGCGTTGCGGGAGATGTCGT CGACCTTCGGCGCAGACCGAGCGTGTAAGGTAAGGGAAGGAGGTGGCGGC GCCGATTGGCACCCATTCACGTAGTTTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAGCA GAAGAAATAACAGCAGTTGTTCTCGTGGAAACCGCGCGCTGCTTCCTGTG CTTTGCTGCATACCGCATGCATACGTGATGTACGTGTTGGGTGTGAATTG CATGCGCCGGCGGTGTCAGCGATCGCGTTTTCCAGATCATGTGCTTGCCT TCATCGTCTCACGCGCGTATGTACATGCATACAGCGGTAACTTACTCGGG GTAGAATGTGCATAGCTCGGGGCGAGAGCACGTGCGTTCCTGCCCTGCCG GAGCTGTAGCTCAGCGCTCGGTCCGGCATCGAGTGCGGTGTCAACGTGCG GGATGCTTGCTCTCAGCAGGCATAAGGCAGAAGTATGTACGTGTGTATGT TTCTGTGCCGTACGGCACCCCCGGCATGGTAGACTTTCTTCATCTCTTAG CAACTCCTTTCCATTGCGTTATACCAGTACATATGTATGGTGTAGACATT ACTATGGCTTTGATGGTCTTGTTTTTTTGCTCTCGCCGCCGCGGTGGCGT CTTGTCCTGGTGGCTGAACTAAATACATTCGTACCCCGATGACTTCACGG CATGGCACCATCATCACGTCAGACGGCGCTTCTGATCGTGCTGGCCTCTC TTCTGGCGCTGGTGCTGGTGCTGACGGAGTTCACCTTCATCAAGAAGGTC TCGTCGCTCAGCCTGTGCATCATCGGTGTGCTGAAGGTCAGAGTCAGTCG CCCGCCCCCCACACCAGTGGCGTCACGCACACACAACGTGGCATTCTCTA GGCCGGTGCTTCGCCGCCGCCGAGGCCGTATTGTAGCCTAATCGCCTCTT CTGTCGTACCTCTTCGGGTTTGTGCGCAACTCGAACATGGGGGGGGCACT CGCTACTGCTGCTGCTGCTGTTGTGGTGGTGGTGTTTATGTGGTTTTTCA GGGGGTGTTTTTCGGGATTTGAAAGTGGCCTGTGGGTTTAGTTTTGGGTT CTACATAGTTCTCCGGGTTTTGCCGTTTTGCCTCTAATTACCCTCCTATG TACCACCCATGCTACAGCTTGGGAGAGGGACGTAGGGGTGTACCTCAGTA GTGCATCAGAGCTGGCCGTATAGGCGGGCCACGGAAATGTACAAGTCCGG ATGCAGAGTGAAGGGTCGCCCGGTGGGGCGAGGTTTCGTACGCTAAAGCT TAGTCTTTGCTTCACGTTGGTACTACGAAAGAGCGTTGTGTACGGGCAGG TTTAGTCGTGCTGGCGACGACAACGAAAGAAGCCGAGACACAAGCGACGA CGAGACACAAGAATACCGGCTGGACTAGATCGCGATCTTGTGGATACCGA TGTATCTATACCATTTACAACACCTATTTATGCACTATGCGTGGTGCTCC GTATCTGTCTATTTAGTGGCGGCAGCTTTAGTGGGCGTGAGAGACTCGTT TAGTTGGCGCGATAGACATGTTTCTCACAGCACCTTCTGAGCAGCACATG AAAATAAAACATATTTTTCGCTCACCGCCCATCGGTGTTCGTCTGTCCTC TCCTCCTCCTCCTCCTCCTCCTCGCTGCGTCCTTCTTTGTTTTTTTTTCG TCCCACAACTCCCACCTCCCTGTGGAATAGGAGCTGCTCCTGGTGCTGTG GTCGGTGGGGGTGAGAGGCGAACACCTCAGCAACCGCACGGGCCTCGGGT TCTTCGTCACCATGCTGGGAGTCACCCTCTACAAGGTCATTCCCAAGGGC TCGCCAAAAGGTGAGGAGAGAGAGCACGGGATCAGAGGCGGGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7394:109..4253+

>mRNA_L-elsbetiae_contig7394.16271.1 ID=mRNA_L-elsbetiae_contig7394.16271.1|Name=mRNA_L-elsbetiae_contig7394.16271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig7394:109..4253+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGACGTCCGATGTTCCATGGTGGATGCTGTGCAGGATCCCCGGTG
TGGGCTGTTGGGAGTGGTGATGCTGGTGAGCGGCGGAGTGTCGCTCATGT
TCTCGGGACAGGGAACGGACCACCAGGAAGACCTGCCTATCGAAGGCTTC
TTGCTGACGCTGCTGAGTGGGATGCTCGCGGGCTTCAAGTGGACACTCTC
TCAGATGTTCGACGTCCGATGTTCCATGGTGGATGCTGTGCAGGATCCCC
GGTGTGGGCTGTTGGGAGTGGTGATGCTGGTGAGCGGCGGAGTGTCGCTC
ATGTTCTCGGGACAGGGAACGGACCACCAGGAAGACCTGCCTATCGAAGG
CTTCTTGCTGACGCTGCTGAGTGGGATGCTCGCGGGCTTCAAGTGGACAC
TCTCTCAGGTGCTGCTGCAAGGAAGGGGTTTTTTCGGGAGGGGCGCGCTG
ACTGTCGGGGAGCACATCCACCCCTTCACGCTACTCCACTACATGTGCTG
CTGCAAGGAAGGGGTTTTTTCGGGAGGGGCGCGCTGACTGTCGGGGAGCA
CATCCACCCCTTCACGCTACTCCACTACATGAGCATTTCGAGCGCTGCTA
CCTTGGTGCCGTTCGTCTTGGCCCTGGAACTGGGAGCGTTGCGGGAGATG
TCGTCGACCTTCGGCGCAGACCGAGCGTGTAAGGAGCATTTCGAGCGCTG
CTACCTTGGTGCCGTTCGTCTTGGCCCTGGAACTGGGAGCGTTGCGGGAG
ATGTCGTCGACCTTCGGCGCAGACCGAGCGTGTAAGACGGCGCTTCTGAT
CGTGCTGGCCTCTCTTCTGGCGCTGGTGCTGGTGCTGACGGAGTTCACCT
TCATCAAGAAGGTCTCGTCGCTCAGCCTGTGCATCATCGGTGTGCTGAAG
ACGGCGCTTCTGATCGTGCTGGCCTCTCTTCTGGCGCTGGTGCTGGTGCT
GACGGAGTTCACCTTCATCAAGAAGGTCTCGTCGCTCAGCCTGTGCATCA
TCGGTGTGCTGAAGGAGCTGCTCCTGGTGCTGTGGTCGGTGGGGGTGAGA
GGCGAACACCTCAGCAACCGCACGGGCCTCGGGTTCTTCGTCACCATGCT
GGGAGTCACCCTCTACAAGGTCATTCCCAAGGGCTCGCCAAAAGGTGAGG
AGAGAGAGCACGGGATCAGAGGCGGGGGCGAGCTGCTCCTGGTGCTGTGG
TCGGTGGGGGTGAGAGGCGAACACCTCAGCAACCGCACGGGCCTCGGGTT
CTTCGTCACCATGCTGGGAGTCACCCTCTACAAGGTCATTCCCAAGGGCT
CGCCAAAAGGTGAGGAGAGAGAGCACGGGATCAGAGGCGGGGGC
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