mRNA_L-elsbetiae_contig739.16266.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 145 bits (365), Expect = 1.450e-35 Identity = 166/311 (53.38%), Postives = 191/311 (61.41%), Query Frame = 3 Query: 174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADT--SLPLRVT 1097 SR I ID G G TPLM AA S V RILLN GAN S++ EDG +ALH + XXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXX AKANPL T+ T + + T VPLD AA G TEVVRELI+QV I+GC G+SGGV AL AA + V +M++L +AGV+DTG+ALI+AA G DE VK LLQQR + L YVN D +GRTPL I + S RV+RLLVDAGADT ++PL+ T Sbjct: 37 SRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGV---------TFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAA-GRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSI----DGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGT 333
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 134 bits (337), Expect = 5.590e-31 Identity = 125/346 (36.13%), Postives = 167/346 (48.27%), Query Frame = 3 Query: 180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVH--CRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVTTAALRITSTDTTMSTARLWLAPPNASIVRKCIDQH*QR 1211 G + ID+ + G TPLM A HS +A++L+ GAN SI + GF+ALH XXXXXXXXXXXX + C+ DG ANPL +T+ G+T T VPLD AA GHT+VVRELIQ++GIEGC +S G AL AA N ++ +MA+LT AGVVDTG+AL AA G G E +VKFLL+ R +Y+N D G TPL + +Q R++R+LVDAGADT+ P++V + DT ++ +L L + + +H QR Sbjct: 128 GTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQL-PDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSP---PGNT-----TTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAA-GMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPL-VVCTQGCFSQAP------RIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQR 456
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 129 bits (323), Expect = 1.330e-29 Identity = 157/306 (51.31%), Postives = 182/306 (59.48%), Query Frame = 3 Query: 180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097 G +I++G TPL++AA HS V ILL+ GAN SI+ + G +ALH+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V R DG A ANPL TR L T +PLD AA G+ V+RELIQ+VGIEGC G S G AL A V MA+LT+AGVVDTGQAL +A G G E +VK+LLQ P +YVN D G TPL + I + + RV RLLV+AGADT+ LR T Sbjct: 23 GSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPL-----------PTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISA-GLGREASVKYLLQNHAKHYGP---GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFP---RVARLLVEAGADTTTELRRT 310
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 121 bits (304), Expect = 5.940e-27 Identity = 169/305 (55.41%), Postives = 204/305 (66.89%), Query Frame = 3 Query: 180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094 G+I+ID+GDPRG TPLM+AAEE HS V ++LLN GA+ + +D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX L TR + + T VPLD AA GH V REL+Q+ GI GCAG+S GVDAL AA + ++ +MA+L +AGVVDTG AL++ G E+A+KFLL+Q+ + T+ AS D G TPL + + + RV+RLLVDAGAD +L +RV Sbjct: 34 GRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGN----------TFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGR-ERALKFLLEQKGEGTARTTYASTPR--DGRGHTPLLSAVTTGPCSP--------RVVRLLVDAGADATLAVRV 317
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 121 bits (303), Expect = 8.920e-27 Identity = 89/175 (50.86%), Postives = 109/175 (62.29%), Query Frame = 3 Query: 579 AKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQ---RQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094 AKA+PL T T+ D +G T L PLD AA GH EVV ELI+QVGI+GC GSSGGV AL AA+ +++M +LTNAGVVDTG AL+ AA G G E +KFLL+Q R+ +D A+YVN D G TPL W R RV+RLLV+AGADT+ P+ V Sbjct: 170 AKADPLLT--TVPDPSGRTFL------PLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAA-GYGGETPLKFLLEQARARKTMDE----AAYVNTRDRGGVTPLL-----WGIQHYRP-----RVVRLLVEAGADTTSPVAV 321
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.690e-25 Identity = 115/245 (46.94%), Postives = 137/245 (55.92%), Query Frame = 3 Query: 174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQR 908 SR I+I++G G TPLM AA S V RIL N GAN S++ +D +ALH + XXXXXXXX XXXXXXXXXXXXXXXXXXX AKANPL T+ T + + T VPLD AA G TEVV+EL+QQV I+GC G+SGGVDAL AA + V +MA+L + GV+DTG+ALI+AA G DE VK LLQQR Sbjct: 37 SRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGV---------TFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAA-GRNDEAGVKLLLQQR 271
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.090e-24 Identity = 134/274 (48.91%), Postives = 165/274 (60.22%), Query Frame = 3 Query: 174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAII 992 S G INI++GDP G TPLM A++ ++ + RIL+ GAN I+ + GF+A XXXXXXXXXXXX XXXXXXXXXXXX R D XXXXXXXXXXXXXXXXXXXAKA+PL R ++ ++ VPLD AAG G + VVRE + Q+GI+GC G S G AL AA+ +V MA+L NAGVVDTG ALI A + E ++KFLL+Q+QL +PT +YV+ D GRTPL I Sbjct: 34 SSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVS---------RDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENR-EGSIKFLLRQQQLQGNPTG--AYVDEARDPFGRTPLLCSI 295
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 114 bits (284), Expect = 3.780e-24 Identity = 167/309 (54.05%), Postives = 200/309 (64.72%), Query Frame = 3 Query: 174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097 S G I+ID GD G TPLM+A +H V ILL+ GA+ S + ++G +ALH++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX AKANPL TR L W+ +PLD AA G VV EL+Q+ GI GC G +GGV AL AA ++ +M LT AGVVDTG AL+ A G + VKFLLQQ+ +P+ ++YV+ D GRTPL I D ++ S +V+RLLVDAGADT+ +R T Sbjct: 35 STGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXRAKANPLLTRVNL--------AWQH--LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMD-VVKFLLQQQN--GTPSEKSAYVSRPRDPCGRTPLICNI---DVGLNQS--CSPKVVRLLVDAGADTTSIVRFT 324
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 113 bits (283), Expect = 8.950e-24 Identity = 171/308 (55.52%), Postives = 201/308 (65.26%), Query Frame = 3 Query: 174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097 SR I++++GD GCTPLM A H V RILLN GAN SI+ + G AL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX A+PL L ++ TG +PLD A + VVREL+Q++GIE C G S GVDALC A +V ++AML +AGVVD G AL +AA G E +VKFLL+Q + S S ++YVN + G TPL + S R++RLLVDAGADT+ R+T Sbjct: 36 SRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXNADPL-----LGNVLPSTG--GVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAA-AQGYEASVKFLLRQHEGKHS-ASRSAYVNKLNRFGLTPLLE--------NITCGHCSARIVRLLVDAGADTTAAYRLT 325
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 111 bits (278), Expect = 2.660e-23 Identity = 117/305 (38.36%), Postives = 149/305 (48.85%), Query Frame = 3 Query: 180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094 G +ID+G+ G TPLM A+ + + R+LLN GA + XXXXXXXXXXXXXXX R SDG AKA+PL T A D+G KE +PLD AA GH EVV ELI+QVGI+GC GSSGG +AL AA + +MA+LT+AGVVDTG AL+ AA G G E +KFLL+Q + S T A+Y+N + +G T L I RV++LLV+AGADT+ P+ + Sbjct: 37 GAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLT------CASDSG--KERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAA-GYGGEAPLKFLLEQARGRKS-TDRAAYMNTLNGVGLTSLLDGI----------QRCRPRVVQLLVEAGADTTSPVLI 321 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig739.16266.1 >prot_L-elsbetiae_contig739.16266.1 ID=prot_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp MYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVQLGHLAVANDLVKback to top mRNA from alignment at L-elsbetiae_contig739:7636..8882+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig739.16266.1 ID=mRNA_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1247bp|location=Sequence derived from alignment at L-elsbetiae_contig739:7636..8882+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig739:7636..8882+ >mRNA_L-elsbetiae_contig739.16266.1 ID=mRNA_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig739:7636..8882+ (Laminarionema elsbetiae ELsaHSoW15)back to top |