mRNA_L-elsbetiae_contig739.16266.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig739.16266.1
Unique NamemRNA_L-elsbetiae_contig739.16266.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.450e-35
Identity = 166/311 (53.38%), Postives = 191/311 (61.41%), Query Frame = 3
Query:  174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADT--SLPLRVT 1097
            SR  I ID G   G TPLM AA    S V RILLN GAN S++ EDG +ALH +          XXXXXXXXXXXXXXXXXXXXXX             XXXXXX          XXXXXXXXXXXXXXXXXXX AKANPL T+ T + +         T VPLD AA  G TEVVRELI+QV I+GC G+SGGV AL  AA +  V +M++L +AGV+DTG+ALI+AA G  DE  VK LLQQR    +   L  YVN   D +GRTPL   I       +     S RV+RLLVDAGADT  ++PL+ T
Sbjct:   37 SRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGV---------TFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAA-GRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSI----DGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGT 333          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 5.590e-31
Identity = 125/346 (36.13%), Postives = 167/346 (48.27%), Query Frame = 3
Query:  180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVH--CRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVTTAALRITSTDTTMSTARLWLAPPNASIVRKCIDQH*QR 1211
            G + ID+ +  G TPLM A    HS +A++L+  GAN SI  + GF+ALH                                         XXXXXXXXXXXX +  C+   DG                       ANPL  +T+     G+T     T VPLD AA  GHT+VVRELIQ++GIEGC  +S G  AL  AA N ++ +MA+LT AGVVDTG+AL  AA G G E +VKFLL+ R          +Y+N  D  G TPL  +      +Q        R++R+LVDAGADT+ P++V      +   DT ++  +L L     +  +    +H QR
Sbjct:  128 GTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQL-PDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSP---PGNT-----TTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAA-GMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPL-VVCTQGCFSQAP------RIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQR 456          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.330e-29
Identity = 157/306 (51.31%), Postives = 182/306 (59.48%), Query Frame = 3
Query:  180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097
            G  +I++G     TPL++AA   HS V  ILL+ GAN SI+ + G +ALH+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V  R   DG                     A ANPL TR  L            T +PLD AA  G+  V+RELIQ+VGIEGC G S G  AL  A     V  MA+LT+AGVVDTGQAL  +A G G E +VK+LLQ       P    +YVN  D  G TPL + I      +  +     RV RLLV+AGADT+  LR T
Sbjct:   23 GSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPL-----------PTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISA-GLGREASVKYLLQNHAKHYGP---GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFP---RVARLLVEAGADTTTELRRT 310          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 5.940e-27
Identity = 169/305 (55.41%), Postives = 204/305 (66.89%), Query Frame = 3
Query:  180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094
            G+I+ID+GDPRG TPLM+AAEE HS V ++LLN GA+   + +D +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX     L TR +  +          T VPLD AA  GH  V REL+Q+ GI GCAG+S GVDAL  AA + ++ +MA+L +AGVVDTG AL++    G  E+A+KFLL+Q+    + T+ AS     D  G TPL + +     +         RV+RLLVDAGAD +L +RV
Sbjct:   34 GRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGN----------TFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGR-ERALKFLLEQKGEGTARTTYASTPR--DGRGHTPLLSAVTTGPCSP--------RVVRLLVDAGADATLAVRV 317          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 8.920e-27
Identity = 89/175 (50.86%), Postives = 109/175 (62.29%), Query Frame = 3
Query:  579 AKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQ---RQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094
            AKA+PL T  T+ D +G T L      PLD AA  GH EVV ELI+QVGI+GC GSSGGV AL  AA+   +++M +LTNAGVVDTG AL+ AA G G E  +KFLL+Q   R+ +D     A+YVN  D  G TPL      W     R      RV+RLLV+AGADT+ P+ V
Sbjct:  170 AKADPLLT--TVPDPSGRTFL------PLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAA-GYGGETPLKFLLEQARARKTMDE----AAYVNTRDRGGVTPLL-----WGIQHYRP-----RVVRLLVEAGADTTSPVAV 321          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.690e-25
Identity = 115/245 (46.94%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQR 908
            SR  I+I++G   G TPLM AA    S V RIL N GAN S++ +D  +ALH +                                           XXXXXXXX          XXXXXXXXXXXXXXXXXXX AKANPL T+ T + +         T VPLD AA  G TEVV+EL+QQV I+GC G+SGGVDAL  AA +  V +MA+L + GV+DTG+ALI+AA G  DE  VK LLQQR
Sbjct:   37 SRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGV---------TFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAA-GRNDEAGVKLLLQQR 271          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.090e-24
Identity = 134/274 (48.91%), Postives = 165/274 (60.22%), Query Frame = 3
Query:  174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAII 992
            S G INI++GDP G TPLM A++  ++ + RIL+  GAN  I+ + GF+A     XXXXXXXXXXXX                          XXXXXXXXXXXX    R  D   XXXXXXXXXXXXXXXXXXXAKA+PL  R  ++         ++  VPLD AAG G + VVRE + Q+GI+GC G S G  AL  AA+  +V  MA+L NAGVVDTG ALI A +    E ++KFLL+Q+QL  +PT   +YV+   D  GRTPL   I
Sbjct:   34 SSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVS---------RDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENR-EGSIKFLLRQQQLQGNPTG--AYVDEARDPFGRTPLLCSI 295          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 3.780e-24
Identity = 167/309 (54.05%), Postives = 200/309 (64.72%), Query Frame = 3
Query:  174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFC-DYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097
            S G I+ID GD  G TPLM+A   +H  V  ILL+ GA+ S + ++G +ALH++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXX AKANPL TR  L         W+   +PLD AA  G   VV EL+Q+ GI GC G +GGV AL  AA   ++ +M  LT AGVVDTG AL+ A   G  +  VKFLLQQ+    +P+  ++YV+   D  GRTPL   I   D    ++   S +V+RLLVDAGADT+  +R T
Sbjct:   35 STGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXRAKANPLLTRVNL--------AWQH--LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMD-VVKFLLQQQN--GTPSEKSAYVSRPRDPCGRTPLICNI---DVGLNQS--CSPKVVRLLVDAGADTTSIVRFT 324          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 8.950e-24
Identity = 171/308 (55.52%), Postives = 201/308 (65.26%), Query Frame = 3
Query:  174 SRGQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVT 1097
            SR  I++++GD  GCTPLM A    H  V RILLN GAN SI+ + G  AL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX  A+PL     L ++   TG      +PLD A     + VVREL+Q++GIE C G S GVDALC A    +V ++AML +AGVVD G AL +AA   G E +VKFLL+Q +   S  S ++YVN  +  G TPL           +     S R++RLLVDAGADT+   R+T
Sbjct:   36 SRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXNADPL-----LGNVLPSTG--GVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAA-AQGYEASVKFLLRQHEGKHS-ASRSAYVNKLNRFGLTPLLE--------NITCGHCSARIVRLLVDAGADTTAAYRLT 325          
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.660e-23
Identity = 117/305 (38.36%), Postives = 149/305 (48.85%), Query Frame = 3
Query:  180 GQINIDRGDPRGCTPLMYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCRRGSDGGXXXXXXXXXXXXXXXXXXXXAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAAGGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGVVDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTPLFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRV 1094
            G  +ID+G+  G TPLM A+   +  + R+LLN GA   +             XXXXXXXXXXXXXXX                                       R SDG                     AKA+PL T       A D+G  KE  +PLD AA  GH EVV ELI+QVGI+GC GSSGG +AL  AA    + +MA+LT+AGVVDTG AL+ AA G G E  +KFLL+Q +   S T  A+Y+N  + +G T L   I               RV++LLV+AGADT+ P+ +
Sbjct:   37 GAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLT------CASDSG--KERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAA-GYGGEAPLKFLLEQARGRKS-TDRAAYMNTLNGVGLTSLLDGI----------QRCRPRVVQLLVEAGADTTSPVLI 321          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig739.16266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL33_9PHAE1.450e-3553.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI5.590e-3136.13EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI1.330e-2951.31EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI5.940e-2755.41EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE8.920e-2750.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF8_ECTSI2.690e-2546.94EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1I8_ECTSI2.090e-2448.91EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI3.780e-2454.05EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI8.950e-2455.52EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5KQV0_9PHAE2.660e-2338.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig739contigL-elsbetiae_contig739:7636..8882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.2
Seed ortholog evalue7e-24
Seed eggNOG ortholog2880.D8LJF9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1247
Cds size978
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig739.16266.1prot_L-elsbetiae_contig739.16266.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig739 7863..8840 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.8216858-UTR-L-elsbetiae_contig739:7635..78621622816822.8216858-UTR-L-elsbetiae_contig739:7635..7862Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig739 7636..7862 +
1691683840.2230425-UTR-L-elsbetiae_contig739:7635..78621691683840.2230425-UTR-L-elsbetiae_contig739:7635..7862Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig739 7636..7862 +
1622816822.8469179-UTR-L-elsbetiae_contig739:8840..88821622816822.8469179-UTR-L-elsbetiae_contig739:8840..8882Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig739 8841..8882 +
1691683840.25076-UTR-L-elsbetiae_contig739:8840..88821691683840.25076-UTR-L-elsbetiae_contig739:8840..8882Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig739 8841..8882 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816822.834976-CDS-L-elsbetiae_contig739:7862..88401622816822.834976-CDS-L-elsbetiae_contig739:7862..8840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig739 7863..8840 +
1691683840.2417662-CDS-L-elsbetiae_contig739:7862..88401691683840.2417662-CDS-L-elsbetiae_contig739:7862..8840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig739 7863..8840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig739.16266.1

>prot_L-elsbetiae_contig739.16266.1 ID=prot_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
MYAAEENHSGVARILLNGGANSSILMEDGFSALHIAVQLGHLAVANDLVK
AGADLEARTFDGVSPLDLAAQHGRPALVAALIEAGANVHCRRGSDGGTPL
FAAADEGHVHIVKQLLRAKANPLSTRTTLNDLAGDTGLWKETRVPLDDAA
GGGHTEVVRELIQQVGIEGCAGSSGGVDALCSAARNHYVHMMAMLTNAGV
VDTGQALISAARGGGDEKAVKFLLQQRQLVDSPTSLASYVNFCDYLGRTP
LFAIIAPWDTTQVRAHMISLRVLRLLVDAGADTSLPLRVTTAALRITSTD
TTMSTARLWLAPPNASIVRKCIDQH*
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mRNA from alignment at L-elsbetiae_contig739:7636..8882+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig739.16266.1 ID=mRNA_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1247bp|location=Sequence derived from alignment at L-elsbetiae_contig739:7636..8882+ (Laminarionema elsbetiae ELsaHSoW15)
ATCGCATGATCATGATGCATACCTGACTTCTGCTCTTGGGTGCTTTCTGC GCCCTGAAGAAATACTGTCAATGACTCCGCTCCAGCAGCAGGGGTGACGG GGTCCTGCAAATGAACTTCATACGGCCGCCCGTATTGGCTCCACCGAGCG CACAATAGCGTTACTCTCCAGGCTCCAGGGGCCAGATTAACATCGACCGA GGCGATCCCAGGGGCTGCACTCCGCTCATGTACGCCGCCGAAGAGAACCA CTCGGGCGTTGCCAGGATCCTGCTGAACGGGGGAGCCAACTCGTCTATAC TGATGGAGGACGGGTTTTCTGCTCTGCACATCGCCGTTCAACTCGGACAT CTCGCCGTGGCCAATGACCTGGTCAAGGCCGGCGCAGATCTGGAAGCAAG GACCTTCGACGGTGTCTCGCCGCTTGATCTAGCTGCACAACACGGGCGTC CAGCGCTAGTGGCAGCGCTGATCGAGGCAGGTGCGAATGTTCACTGTCGC CGTGGATCGGATGGTGGTACACCGCTGTTTGCGGCGGCCGATGAAGGACA TGTCCACATCGTCAAGCAGCTCCTTCGTGCGAAAGCGAATCCGCTGTCGA CCAGAACGACGTTGAATGACTTAGCGGGAGACACTGGCCTTTGGAAGGAA ACTCGCGTCCCGCTGGACGACGCGGCTGGGGGTGGTCATACGGAGGTGGT ACGCGAGCTGATCCAGCAGGTCGGGATCGAAGGTTGTGCTGGTTCAAGCG GTGGTGTAGATGCCCTCTGTTCGGCCGCAAGGAACCATTATGTGCACATG ATGGCCATGCTGACAAACGCCGGAGTGGTCGATACAGGACAGGCTCTCAT TTCCGCAGCTCGAGGCGGCGGTGATGAGAAGGCAGTGAAGTTCCTGTTGC AGCAGCGCCAGCTGGTGGACTCCCCGACCAGCTTGGCTTCATACGTTAAC TTCTGCGATTATTTGGGCCGAACGCCCTTGTTCGCTATCATTGCCCCTTG GGACACTACCCAGGTTCGAGCCCACATGATTTCTCTTAGGGTGCTGCGGC TACTTGTTGACGCCGGGGCAGATACATCGTTGCCTCTACGAGTCACAACG GCAGCTCTTCGAATCACGAGCACAGACACTACGATGAGTACGGCACGCCT CTGGCTTGCACCACCGAACGCCTCCATAGTAAGAAAGTGCATCGATCAGC ATTGACAGAGGAGCAGCTTCACCGGCTCGAAGCCGTCCGCGCTTGCT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig739:7636..8882+

>mRNA_L-elsbetiae_contig739.16266.1 ID=mRNA_L-elsbetiae_contig739.16266.1|Name=mRNA_L-elsbetiae_contig739.16266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig739:7636..8882+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGCCGCCGAAGAGAACCACTCGGGCGTTGCCAGGATCCTGCTGAA
CGGGGGAGCCAACTCGTCTATACTGATGGAGGACGGGTTTTCTGCTCTGC
ACATCGCCGTTCAACTCGGACATCTCGCCGTGGCCAATGACCTGGTCAAG
GCCGGCGCAGATCTGGAAGCAAGGACCTTCGACGGTGTCTCGCCGCTTGA
TCTAGCTGCACAACACGGGCGTCCAGCGCTAGTGGCAGCGCTGATCGAGG
CAGGTGCGAATGTTCACTGTCGCCGTGGATCGGATGGTGGTACACCGCTG
TTTGCGGCGGCCGATGAAGGACATGTCCACATCGTCAAGCAGCTCCTTCG
TGCGAAAGCGAATCCGCTGTCGACCAGAACGACGTTGAATGACTTAGCGG
GAGACACTGGCCTTTGGAAGGAAACTCGCGTCCCGCTGGACGACGCGGCT
GGGGGTGGTCATACGGAGGTGGTACGCGAGCTGATCCAGCAGGTCGGGAT
CGAAGGTTGTGCTGGTTCAAGCGGTGGTGTAGATGCCCTCTGTTCGGCCG
CAAGGAACCATTATGTGCACATGATGGCCATGCTGACAAACGCCGGAGTG
GTCGATACAGGACAGGCTCTCATTTCCGCAGCTCGAGGCGGCGGTGATGA
GAAGGCAGTGAAGTTCCTGTTGCAGCAGCGCCAGCTGGTGGACTCCCCGA
CCAGCTTGGCTTCATACGTTAACTTCTGCGATTATTTGGGCCGAACGCCC
TTGTTCGCTATCATTGCCCCTTGGGACACTACCCAGGTTCGAGCCCACAT
GATTTCTCTTAGGGTGCTGCGGCTACTTGTTGACGCCGGGGCAGATACAT
CGTTGCCTCTACGAGTCACAACGGCAGCTCTTCGAATCACGAGCACAGAC
ACTACGATGAGTACGGCACGCCTCTGGCTTGCACCACCGAACGCCTCCAT
AGTAAGAAAGTGCATCGATCAGCATTGAATGTACGCCGCCGAAGAGAACC
ACTCGGGCGTTGCCAGGATCCTGCTGAACGGGGGAGCCAACTCGTCTATA
CTGATGGAGGACGGGTTTTCTGCTCTGCACATCGCCGTTCAACTCGGACA
TCTCGCCGTGGCCAATGACCTGGTCAAGGCCGGCGCAGATCTGGAAGCAA
GGACCTTCGACGGTGTCTCGCCGCTTGATCTAGCTGCACAACACGGGCGT
CCAGCGCTAGTGGCAGCGCTGATCGAGGCAGGTGCGAATGTTCACTGTCG
CCGTGGATCGGATGGTGGTACACCGCTGTTTGCGGCGGCCGATGAAGGAC
ATGTCCACATCGTCAAGCAGCTCCTTCGTGCGAAAGCGAATCCGCTGTCG
ACCAGAACGACGTTGAATGACTTAGCGGGAGACACTGGCCTTTGGAAGGA
AACTCGCGTCCCGCTGGACGACGCGGCTGGGGGTGGTCATACGGAGGTGG
TACGCGAGCTGATCCAGCAGGTCGGGATCGAAGGTTGTGCTGGTTCAAGC
GGTGGTGTAGATGCCCTCTGTTCGGCCGCAAGGAACCATTATGTGCACAT
GATGGCCATGCTGACAAACGCCGGAGTGGTCGATACAGGACAGGCTCTCA
TTTCCGCAGCTCGAGGCGGCGGTGATGAGAAGGCAGTGAAGTTCCTGTTG
CAGCAGCGCCAGCTGGTGGACTCCCCGACCAGCTTGGCTTCATACGTTAA
CTTCTGCGATTATTTGGGCCGAACGCCCTTGTTCGCTATCATTGCCCCTT
GGGACACTACCCAGGTTCGAGCCCACATGATTTCTCTTAGGGTGCTGCGG
CTACTTGTTGACGCCGGGGCAGATACATCGTTGCCTCTACGAGTCACAAC
GGCAGCTCTTCGAATCACGAGCACAGACACTACGATGAGTACGGCACGCC
TCTGGCTTGCACCACCGAACGCCTCCATAGTAAGAAAGTGCATCGATCAG
CATTGA
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