mRNA_L-elsbetiae_contig7380.16255.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7380.16255.1
Unique NamemRNA_L-elsbetiae_contig7380.16255.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 2.660e-145
Identity = 209/271 (77.12%), Postives = 233/271 (85.98%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRH 813
            RFS+TLFL+WV  V NV F+++AM VNGRSG+ +P HLFGTAGFAYI AMV S+EALKYVNFPTKELGKSCKM+PVMLFGVLFAKK+YSL+EYLCV LITVGIVTFNLS     + EDKENSTYGL LL  SL+LDGVT S QERLKAACKPTVHEMMFFMNAWAL +L+AA+Y+SGQ  EG AFCS NP VM YVLGFSLA+A GQNFIYYTI+ F+PLV TTI TTRKFFTIV SVI++GHAI P QWGGV MVF GIG+EMR KY+RH
Sbjct:   58 RFSSTLFLLWVQCVVNVAFSFVAMFVNGRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLS-GKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGIGYEMRGKYQRH 327          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 3.420e-130
Identity = 189/277 (68.23%), Postives = 222/277 (80.14%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRHSELKVH 831
            RFSATLFL+WVP V NVVFA+L M   G SGE +PQ LFG  G AYI AM+LS+EAL+YVNFPTKELGKSCKM+PVMLFGVLFAKK+YS+REYLCV LIT GIV FNL++ S+ + +DK NS YGLCLL+ SL+ DGV TS+QERLKA CKPTV+EMMF+ NAWAL  L+AA++ SGQW +G  FC++NPLV  YV+ FSLA+A GQ FIYYTIT F+PL   TI TTRKFFTIVFSVI +GH+I   QWGGV MVF GIGF M  K++R S  + H
Sbjct:   40 RFSATLFLLWVPCVVNVVFAFLGMQCVGSSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITTGIVIFNLAERSNNE-QDKRNSMYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEH 315          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA)

HSP 1 Score: 321 bits (823), Expect = 2.880e-106
Identity = 165/275 (60.00%), Postives = 206/275 (74.91%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRHSELK 825
            RFS T FL+WV  V NV+FA +AM +   SGE +P  LF  AG  YISAM+ S+E+L Y+NFPTKELGKSCKM+PVMLFGV+FA KRYS+R+Y+ V LIT GIVTFNL+    K    +ENSTYGL LL +SLVLDGVT STQ+ +K A K TVHEMMF+MNAWALV+LT  + ++GQ A G AFC ENP V+  + GF+L +A+GQNFIY+TI+ FS LV TTI TTRKFFTI+FSV+ +GH + P QW GV MVF  +   M +K++++   K
Sbjct:   71 RFSQTQFLLWVQCVVNVIFAGIAMMLAKGSGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLA---GKHKSGRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTALIDNMWSKHQKNQSRK 342          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.650e-89
Identity = 140/271 (51.66%), Postives = 185/271 (68.27%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRH 813
            +F+ATLF+++V  VTN + AY A  V       +P   F    FAY+ AM+ S EALK+V++PT+ LGKSCKM+PVML GVL  +K+YS REY CV LIT GI  F L KAS K    +ENS+YGL LL LSL LDGV+   QE +    +P+VH+ MF+ N WA++   A +  +GQ   G+AFC+ENP ++  V  FS+ SA+GQNFIY+TI  FS L  TTI TTRKFFTI+FSV+ YGH +    W GV +VFAG+G+E+ +KY ++
Sbjct:   41 KFTATLFMLFVQCVTNALVAYAATFVWKPQRPRMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAA-QENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGLGWELVSKYHKY 310          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 5.200e-89
Identity = 136/198 (68.69%), Postives = 159/198 (80.30%), Query Frame = 1
Query:  217 MVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRR 810
            M+PVMLFGVLFAKK+YS+REYLCV LIT+GIV FNL+K S K  EDK+NSTYGL LL+ SL+ DGV TS+QERLK  CKPT +EMMF+ NAWAL  L+AA++ SGQW +G  FC++NPLVM YV+ FSL +A GQ FIYYTIT FSPL   TI TTRKFFTIVFSVI +GH+I   QWGGV MVF GIGF M  K++R
Sbjct:    1 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGS-KTEEDKQNSTYGLSLLVTSLIFDGVMTSSQERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKR 197          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD)

HSP 1 Score: 276 bits (705), Expect = 8.330e-89
Identity = 138/273 (50.55%), Postives = 188/273 (68.86%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRHSE 819
            +F+ATLF+++V  VTN + AY A  V      ++P   F    FAY+ AM+ S EALK+V++PT+ LGKSCKM+PVM+ GVL  +K+Y++REY+CV LITVGI  F L KAS K    +ENSTYGL LL LSL LDGV+   QE +    +P+VH+ MF+ N WA++   A + ++GQ   G  FC ENP ++  V  FS+ SA+GQNFIY+TI  FS L  TTI TTRKFFTI+FSV+ YGH +    W GV +VF G+G+E+ +KY+++ +
Sbjct:   48 KFTATLFMLFVQCVTNALVAYAATFVWKPQRPSMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAA-QENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGLGWELTSKYQKYQQ 319          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN)

HSP 1 Score: 271 bits (693), Expect = 7.690e-87
Identity = 137/273 (50.18%), Postives = 183/273 (67.03%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRHSE 819
            +FSATLF+++V  V N + AY A  V       +P   F     AY+ AM+ S EALK+V++PT+ LGKSCKM+PVML GVL  +K+Y+LR+Y+CV LIT GI  F L KAS K    +ENSTYGL LL  SL LDG++   QE +    +PTVH+ MF+ N WA++   A + V+GQ   G  FC ENP ++  V  FS+ SA GQNFIY+TI  FS L  TTI TTRKFFTI+FSV+ YGH++    W GV +VF G+G+E+ +KY+++ +
Sbjct:   59 KFSATLFMLFVQCVMNALVAYSATFVWRPERPTMPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHAS-QENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGLGWELSSKYQKYQQ 330          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: T0RGF4_SAPDV (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RGF4_SAPDV)

HSP 1 Score: 268 bits (685), Expect = 9.090e-86
Identity = 140/272 (51.47%), Postives = 185/272 (68.01%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRHS 816
            +F+ATLFL+ V  + N   A  A  V   + +++P   F  + FAY+ AM+ S EALK+V++PT+ LGKSCKM+PVML GVL  +K+Y+L+EYL VGLIT+GIV F L KAS K  +  ENS YGL LL +SL LDGVT   QE L A  KP+VH+ M   N WA+V       V+GQ A+G AFC  NP +   +  FS+ SA+GQNFIY+TI  FS L  TTI TTRKFFTI+ SV+++G+A+ P  W GV +VFAG+G E+  KY +++
Sbjct:   51 KFTATLFLLCVQCIMNSAVACAATFVWKPTTKSVPLQPFAFSAFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIGRKKYALKEYLSVGLITLGIVVFQLGKASSKSGQ--ENSYYGLGLLFVSLALDGVTGPNQEALSATYKPSVHQQMLNTNVWAVVYTAIGCLVTGQGADGFAFCMRNPEIYSALFLFSVCSALGQNFIYFTIQRFSALTCTTITTTRKFFTILASVLIFGNALSPQSWAGVAIVFAGLGIELTTKYAKYA 320          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: H3GWN5_PHYRM (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GWN5_PHYRM)

HSP 1 Score: 263 bits (673), Expect = 5.920e-84
Identity = 137/271 (50.55%), Postives = 182/271 (67.16%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRH 813
            +F+ATLF+++V  VTN + AY A  V       +P   F     AY+ AM+ S EALK+V+FPT+ LGKSCKM+PVML GVL  +K+Y+LR+Y+CV +IT GI  F L KAS K  E +ENSTYGL LL  SL LDG++   QE +    +P+VH+ M   N WA+V     + V+GQ  EG  FC ENP ++  V  FS+ SA+GQNFIY+TI  FS L  TTI TTRKFFTI+FSV+ YGH +    W GV +VF G+G+E+ +KY+++
Sbjct:   50 KFTATLFMLFVQCVTNSLVAYAATFVWKPKRARMPLAPFAMTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVVVITTGIAVFQLGKASAKHAE-RENSTYGLLLLFASLTLDGISGPKQEEIAHQLRPSVHQQMLNTNIWAVVYTGVGALVTGQALEGFFFCIENPSILNSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWLGVAVVFIGLGWELSSKYQKY 319          
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL)

HSP 1 Score: 263 bits (671), Expect = 1.190e-83
Identity = 136/271 (50.18%), Postives = 183/271 (67.53%), Query Frame = 1
Query:    1 RFSATLFLMWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALKYVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNLSKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMMFFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQNFIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFAGIGFEMRAKYRRH 813
            +F++TLF+++V  VTN + AY A  V       +P   F     AY+ AM+ S EALK+V+FPT+ LGKSCKM+PVML GVL  +K+Y+LR+Y+CV +IT GI  F L K+S K  E +ENSTYGL LL LSL LDG++   QE +    +P+VH+ MF  N WA+V     + V+GQ  EG+ FC  NP ++  V  FS+ SA+GQNFIY+TI  FS L  TTI TTRKFFTI+FSV+ YGH +    W GV +V  G+G+E+ +KYR++
Sbjct:   50 KFTSTLFMLFVQCVTNSIVAYAATFVWKPERARMPLAPFALTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLVITSGIAVFQLGKSSAKHAE-RENSTYGLLLLFLSLTLDGISGPKQEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWFGVAIVNIGLGWELSSKYRKY 319          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7380.16255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G358_ECTSI2.660e-14577.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G364_ECTSI3.420e-13068.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCP5_9STRA2.880e-10660.00UAA transporter n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A5D6XRA2_9STRA1.650e-8951.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6H5JQ56_9PHAE5.200e-8968.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3X0M7_GLOUD8.330e-8950.55Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BZF8_PYTIN7.690e-8750.18Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
T0RGF4_SAPDV9.090e-8651.47Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
H3GWN5_PHYRM5.920e-8450.55Uncharacterized protein n=18 Tax=Peronosporaceae T... [more]
A0A0P1AG43_PLAHL1.190e-8350.18Solute carrier family 35 member b1 n=6 Tax=Peronos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7380contigL-elsbetiae_contig7380:6164..9825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score410.2
Seed ortholog evalue7.3e-112
Seed eggNOG ortholog2880.D7G358
KEGG koko:K15275
KEGG TC2.A.7.11.1,2.A.7.11.4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1580@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons7
Model size831
Cds size807
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7380.16255.1prot_L-elsbetiae_contig7380.16255.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7380 6164..9801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.6826398-CDS-L-elsbetiae_contig7380:6163..62421622816821.6826398-CDS-L-elsbetiae_contig7380:6163..6242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 6164..6242 -
1691683839.3552637-CDS-L-elsbetiae_contig7380:6163..62421691683839.3552637-CDS-L-elsbetiae_contig7380:6163..6242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 6164..6242 -
1622816821.6978886-CDS-L-elsbetiae_contig7380:6553..67261622816821.6978886-CDS-L-elsbetiae_contig7380:6553..6726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 6554..6726 -
1691683839.36769-CDS-L-elsbetiae_contig7380:6553..67261691683839.36769-CDS-L-elsbetiae_contig7380:6553..6726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 6554..6726 -
1622816821.713001-CDS-L-elsbetiae_contig7380:7153..73031622816821.713001-CDS-L-elsbetiae_contig7380:7153..7303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 7154..7303 -
1691683839.3810406-CDS-L-elsbetiae_contig7380:7153..73031691683839.3810406-CDS-L-elsbetiae_contig7380:7153..7303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 7154..7303 -
1622816821.7231936-CDS-L-elsbetiae_contig7380:7906..79841622816821.7231936-CDS-L-elsbetiae_contig7380:7906..7984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 7907..7984 -
1691683839.389731-CDS-L-elsbetiae_contig7380:7906..79841691683839.389731-CDS-L-elsbetiae_contig7380:7906..7984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 7907..7984 -
1622816821.734378-CDS-L-elsbetiae_contig7380:8221..83561622816821.734378-CDS-L-elsbetiae_contig7380:8221..8356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 8222..8356 -
1691683839.399623-CDS-L-elsbetiae_contig7380:8221..83561691683839.399623-CDS-L-elsbetiae_contig7380:8221..8356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 8222..8356 -
1622816821.744673-CDS-L-elsbetiae_contig7380:9041..91581622816821.744673-CDS-L-elsbetiae_contig7380:9041..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 9042..9158 -
1691683839.4125013-CDS-L-elsbetiae_contig7380:9041..91581691683839.4125013-CDS-L-elsbetiae_contig7380:9041..9158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 9042..9158 -
1622816821.754744-CDS-L-elsbetiae_contig7380:9726..98011622816821.754744-CDS-L-elsbetiae_contig7380:9726..9801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 9727..9801 -
1691683839.4212203-CDS-L-elsbetiae_contig7380:9726..98011691683839.4212203-CDS-L-elsbetiae_contig7380:9726..9801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7380 9727..9801 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.7646124-UTR-L-elsbetiae_contig7380:9801..98251622816821.7646124-UTR-L-elsbetiae_contig7380:9801..9825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7380 9802..9825 -
1691683839.43034-UTR-L-elsbetiae_contig7380:9801..98251691683839.43034-UTR-L-elsbetiae_contig7380:9801..9825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7380 9802..9825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7380.16255.1

>prot_L-elsbetiae_contig7380.16255.1 ID=prot_L-elsbetiae_contig7380.16255.1|Name=mRNA_L-elsbetiae_contig7380.16255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MWVPTVTNVVFAYLAMHVNGRSGENLPQHLFGTAGFAYISAMVLSVEALK
YVNFPTKELGKSCKMVPVMLFGVLFAKKRYSLREYLCVGLITVGIVTFNL
SKASDKDTEDKENSTYGLCLLLLSLVLDGVTTSTQERLKAACKPTVHEMM
FFMNAWALVLLTAASYVSGQWAEGVAFCSENPLVMCYVLGFSLASAVGQN
FIYYTITCFSPLVMTTIATTRKFFTIVFSVILYGHAICPAQWGGVVMVFA
GIGFEMRAKYRRHSELKVH
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mRNA from alignment at L-elsbetiae_contig7380:6164..9825-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7380.16255.1 ID=mRNA_L-elsbetiae_contig7380.16255.1|Name=mRNA_L-elsbetiae_contig7380.16255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3662bp|location=Sequence derived from alignment at L-elsbetiae_contig7380:6164..9825- (Laminarionema elsbetiae ELsaHSoW15)
AGGTTTTCGGCGACGCTGTTCCTGATGTGGGTGCCGACCGTCACCAACGT CGTCTTCGCCTACCTGGCCATGCACGTCAACGGGCGGTCTGGGGAGAATG TGGGTCCCGCCAAATGGGATTTCCCGACCGGACTTCTGTACTATAGTCTA CATCTCATTTGTTTTTTCTCCCGGCAGATGTTCTCCCAACACGCGAAACG CTCCGCATTATTTTGGTTCTTTGGTGGCTGCCTCGGCCCGGGGGGCACAC AGACAGGTCCATCACAGGGAAGTACCGTTTTCTCCATAGGCGCGCGGCTA GTCCGTCCTGCCCTGTATTGGGCAGGAAAACATAAACAATGGTATCGTGC TTCGCCGCCGGCCTTGGTCATCTCTCATATGTGTCCATCTATCTCCAGAT GCAACAGATATACATATTTGCAGACCATCAACAACGCTGGATCGCTGATG AGCTACTCGTTCCCAAGCCTGCTGTGAAGAGGAGCATGCAGACAAGTGCC TGACCTCTTCCTTCACCCTGGTTTGCATGCATGGTTGAACACAACACAAC ACGTCTCGCTTGCTTGCGTCTCGCGTGTTCCGGGTGGTTTTGCTGACTTC TGTCTCCAACGCTACCCCCCTCCCGATTTTTCCGGGGTCGTATTTCCGTT TGTGACGTGACGCGCAGTTGCCGCAGCACCTGTTCGGGACGGCGGGTTTT GCCTACATCAGCGCCATGGTGCTCTCGGTAGAGGCTCTCAAGTACGTCAA CTTCCCCACCAAGGAGCTCGGGAAGTCCTGCAAGGTGGGAAAACTCGGAA GCCTCCGCTCCAACCAGCCCCCGTTGTATGATAGGTACTCCATGCCTTCC TTGCTGCACCTTCCTCAAGCGAGGCAGGTTTGCGCTAACCAAGCACTTTT TGTGAGAGAGACATTTAGGCATGCGTGTTCCGAAATGCTCGACCGACAAC ACGCGTGCGACCCACTGAAGCAAGACTAGTCACGTATGAAGTCTGCTAGA AACCATCACCGTAAGCTCCCATCGGTCACACAACGACCGTAGGTGGCACA AGTAACCAACCCCCCTGGACAGATTTCCAAGGCTCGATTCCTCCGGAGCG AAGGGGGCTCCAGCACCAAACATCGCATTTTCGAACAGCCCTCGACTACT AGATCTTTCCTACGCCGCCCCATTTCAGCACTGGCACTCTTCTTGCTGGG GAGGAATCGAGCTTTAAAAATCTGTACGGGAGGGGGGGGGGGTGGTATCT TGTGTCACTACCTGCGCCTGGTCTGCGGTTCACAGCCCCCGCCTCCACCT TGTGCTGTCTGGATATCTCCTACTAAAACAAAGAGGGGGGAGTGACCGTG GCTTCAATATGTGATCGTGACCACAGCGAGTGCTGGTCACCAATCGAAAC TCGACACCCTGACAGTGTCTGTTCTCGGTTGTTCCTTGCTCCGGTGTTGT TGCTGACAACCGTTGTCAGATGGTCCCGGTGATGCTGTTCGGAGTGCTGT TCGCCAAGAAAAGGTACAGTCTGAGGGAATACCTTTGCGTGGGGCTCATT ACGGTCGGCATCGTCACATTCAACCTCTCCAAGGCATCCGACAAGGACAC AGAGGTACGCCCGGCGCTACATGTGTTGCTTAGCAGGCGCTCGTCGGAGA AGCCCCAAGAGGCTCAGCAACTGATCGGTGCATAGTAATATACACCGCTT TCACGAAAAAGCAGTTTTAGAATATTTTAGTCCAGGCGAGTTCCATCGGC GCCCGAGAACCACGTGTGTTCATGTGTTTTTCTGGCCCCTGCCTGGTTTT GTTCTTCCACTTCCACTTCCACCACCCGATATACCTTGCAGGACAAGGAG AACAGCACCTACGGCCTGTGCCTGCTGCTCCTCAGCCTCGTCCTCGACGG TGTCACCACAAGCACCCAGGTTAGATACTACTGCTAACACAGGCATCATT TATTTGCTGCTGCTGCTGCTTTTCCTGCTGCTGCTGCTGCTGTTGTTGCT GTGTTTTGCTGACTCCGCATTAGAAAACCGTTCTGATCTCTCCACCCAGT ACCTGAATCCGTCCGTACTGATCAAAGGCAAACAAACAACGTCCTGGTAA CACGTAGTCGGTAGTAGGCGTGTGCAGCGGTTGCAAGGTGAATGTTCCAA TTATCCCCGAAGGGGTCGGTGTGTGCTTAAGGGGAGGCGGTTGCTTAGAC TTGAAGGGGGAGGGGCCTCTACATACACGCTCCACCATCCCCGTATCGTA CCTTGCCGCTGCATCGTCTATCGCCCCACCCTCGTCGTTCGGAAGGGCTG TGAGGTGAAAGCTAACTTAAGTGCAGACAACGAAAAATACGAGAGTCCCC CTCGACATATGCACCCCCCCCCCCTCCTAAACCTCGCTTGGACGCATGCC CCCCCCCGACGCCCCTCGGCGTAGTTTCTTCGAGAGCAAAACCCCACACG AACGACTGCCTGACACCTCCTCCCCTTCCAATCCCCCCCCCAATGAAAAA CAACGGTTACACACGCCTCCAGGAGCGGCTAAAAGCGGCGTGCAAGCCCA CGGTGCACGAGATGATGTTCTTCATGAACGCCTGGGCCCTCGTGCTGCTG ACAGCCGCCTCCTACGTCTCGGGGCAGTGGGCGGAAGGGGTGGCGTTCTG CTCAGAGAACCCGTTGGTGATGGTGAGTGGTGGCGGTGCAATCAAAACGA CATTTTCGAGGAGGCGCAAAATGAACAGTTTAATTACAGGGGTGATGGCG TTTTGCTCGCGCCCCAGCTCCATTAGATTTATAGTCGCCGCCGCGTCCGA GCTTCGGGTCGAGAATCAAGAGAGGCGCGCGAGGGTCACTGATCGCGGCA CACTGCCACCCGTTGGTTTGTGACACGCGCTTTAATGTAGAATGCTGGGC TGACTGGTGATGATGCTCTTAACGCAAGCGCCACGCGTTTTCATAATCCG GTGCTCGACTGTTGGGCGAGGGTCGTGTTGGACTCTCTTCTATTGGAGCG CGTGGACATCAGTTCTGTCCTCAACCAGCCTTCTCGACTATCCCGTGTTG TGGCGCTCTTGCTCTCGCATCATGCTCTGCGTGCCGTTGGCACCATCAGT GCTACGTCCTGGGGTTCTCGCTGGCGTCCGCGGTGGGGCAAAACTTCATT TACTACACCATCACCTGCTTTAGCCCGCTGGTCATGACCACGATCGCGAC GACCCGAAAGTTCTTCACCATAGTCTTCTCCGTCATCTTGTACGGCCACG CTATTTGCCCAGCGCAGTGGGGGTGAGAAGTAGTTGTTGTTGGTGTTTTC ATCTTCCCTGCTTTTTCTGTGTGACCCGTTTGCTTTCGTCTGGGTTCGAC TCGCCTTTTCTTCCTTAGGGGGTCAGGGAAAACCGCGATCCGGCGTCGGT TACTCGTTTTCCATTGGTGTTTTTTTCTCTCTGGTACGCTTGCTTGTCCA AACGTGTGCGACGTTGCCTCAGGAAGAGATCCCTCCTGCTGTGAAGATGC CTTTGTTCTGTTCTCCGTTATTACTTGACGTTTTTGTTTACTTGCGCCCG ATTCCCTTTTCGCCTCTCTCTTGCCCTCTACAGCGGTGTGGTGATGGTTT TCGCCGGCATCGGATTCGAGATGCGGGCCAAGTACCGGCGCCATAGCGAG CTTAAGGTTCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7380:6164..9825-

>mRNA_L-elsbetiae_contig7380.16255.1 ID=mRNA_L-elsbetiae_contig7380.16255.1|Name=mRNA_L-elsbetiae_contig7380.16255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig7380:6164..9825- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGGTGCCGACCGTCACCAACGTCGTCTTCGCCTACCTGGCCATGCA
CGTCAACGGGCGGTCTGGGGAGAATATGTGGGTGCCGACCGTCACCAACG
TCGTCTTCGCCTACCTGGCCATGCACGTCAACGGGCGGTCTGGGGAGAAT
TTGCCGCAGCACCTGTTCGGGACGGCGGGTTTTGCCTACATCAGCGCCAT
GGTGCTCTCGGTAGAGGCTCTCAAGTACGTCAACTTCCCCACCAAGGAGC
TCGGGAAGTCCTGCAAGTTGCCGCAGCACCTGTTCGGGACGGCGGGTTTT
GCCTACATCAGCGCCATGGTGCTCTCGGTAGAGGCTCTCAAGTACGTCAA
CTTCCCCACCAAGGAGCTCGGGAAGTCCTGCAAGATGGTCCCGGTGATGC
TGTTCGGAGTGCTGTTCGCCAAGAAAAGGTACAGTCTGAGGGAATACCTT
TGCGTGGGGCTCATTACGGTCGGCATCGTCACATTCAACCTCTCCAAGGC
ATCCGACAAGGACACAGAGATGGTCCCGGTGATGCTGTTCGGAGTGCTGT
TCGCCAAGAAAAGGTACAGTCTGAGGGAATACCTTTGCGTGGGGCTCATT
ACGGTCGGCATCGTCACATTCAACCTCTCCAAGGCATCCGACAAGGACAC
AGAGGACAAGGAGAACAGCACCTACGGCCTGTGCCTGCTGCTCCTCAGCC
TCGTCCTCGACGGTGTCACCACAAGCACCCAGGACAAGGAGAACAGCACC
TACGGCCTGTGCCTGCTGCTCCTCAGCCTCGTCCTCGACGGTGTCACCAC
AAGCACCCAGGAGCGGCTAAAAGCGGCGTGCAAGCCCACGGTGCACGAGA
TGATGTTCTTCATGAACGCCTGGGCCCTCGTGCTGCTGACAGCCGCCTCC
TACGTCTCGGGGCAGTGGGCGGAAGGGGTGGCGTTCTGCTCAGAGAACCC
GTTGGTGATGGAGCGGCTAAAAGCGGCGTGCAAGCCCACGGTGCACGAGA
TGATGTTCTTCATGAACGCCTGGGCCCTCGTGCTGCTGACAGCCGCCTCC
TACGTCTCGGGGCAGTGGGCGGAAGGGGTGGCGTTCTGCTCAGAGAACCC
GTTGGTGATGTGCTACGTCCTGGGGTTCTCGCTGGCGTCCGCGGTGGGGC
AAAACTTCATTTACTACACCATCACCTGCTTTAGCCCGCTGGTCATGACC
ACGATCGCGACGACCCGAAAGTTCTTCACCATAGTCTTCTCCGTCATCTT
GTACGGCCACGCTATTTGCCCAGCGCAGTGGGGTGCTACGTCCTGGGGTT
CTCGCTGGCGTCCGCGGTGGGGCAAAACTTCATTTACTACACCATCACCT
GCTTTAGCCCGCTGGTCATGACCACGATCGCGACGACCCGAAAGTTCTTC
ACCATAGTCTTCTCCGTCATCTTGTACGGCCACGCTATTTGCCCAGCGCA
GTGGGGCGGTGTGGTGATGGTTTTCGCCGGCATCGGATTCGAGATGCGGG
CCAAGTACCGGCGCCATAGCGAGCTTAAGGTTCACCGGTGTGGTGATGGT
TTTCGCCGGCATCGGATTCGAGATGCGGGCCAAGTACCGGCGCCATAGCG
AGCTTAAGGTTCAC
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