mRNA_L-elsbetiae_contig7378.16251.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7378.16251.1
Unique NamemRNA_L-elsbetiae_contig7378.16251.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A6H5JEW3_9PHAE (S-formylglutathione hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEW3_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 2.220e-106
Identity = 155/173 (89.60%), Postives = 164/173 (94.80%), Query Frame = 2 
Query:  773 GWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            G K  YRMY YVTEELP+VVAA+FPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVS FSAICNPVECPWGKKAFSGYLGKDE AWKEYDATELM R+GPFPSLGKILLDQGSADNFLT GQL P++LVKACE+KGQPCEMRMQDGYDHSYFFIS+FIEDHV++HADRLLA
Sbjct:  181 GKKTRYRMYAYVTEELPAVVAASFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSAFSAICNPVECPWGKKAFSGYLGKDEAAWKEYDATELMLRDGPFPSLGKILLDQGSADNFLTAGQLLPEALVKACEDKGQPCEMRMQDGYDHSYFFISTFIEDHVSMHADRLLA 353
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A7S2UZ85_9STRA (S-formylglutathione hydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ85_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.090e-87
Identity = 122/199 (61.31%), Postives = 154/199 (77.39%), Query Frame = 2 
Query:  692 PPAVGVR-QDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRL 1285
            P   G+  +D GWDFGTGAGFY++A +PGWKD YRMY+Y+T+EL  +V +NFP VD ++ S+ GHSMGGHGAL +AF+NP  Y+SVS F+ IC+P+ CPWG KAF+GYLG D+  WKEYDAT LM+  GPFPS   IL+DQG+AD+FL   QL P++L  AC EK Q   +RMQ+GYDHSYFFI+SF+EDH+  HAD L
Sbjct:   87 PRGAGIEGEDSGWDFGTGAGFYLNALQPGWKDHYRMYDYITKELVEIVCSNFP-VDPNRKSITGHSMGGHGALTIAFKNPSAYKSVSAFAPICHPINCPWGDKAFTGYLGTDKELWKEYDATILMKEKGPFPSFSDILIDQGAADDFLAANQLQPEALQAACAEKNQKVSVRMQEGYDHSYFFIASFMEDHIQFHADAL 284
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A6P4ZVG4_BRABE (S-formylglutathione hydrolase n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZVG4_BRABE)

HSP 1 Score: 261 bits (668), Expect = 3.890e-80
Identity = 121/194 (62.37%), Postives = 151/194 (77.84%), Query Frame = 2 
Query:  713 QDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRR-NGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            +++GWDFGTGAGFYV+ATE  WK +YRMY YVTEELPSVV +NFP VD+ + SV GHSMGGHGAL+   +NP KYRSVS F+ ICNP+ CPWG+KAFSGYLG ++  WKEYDA+EL+++  GP      IL+DQG+ADNFL  GQL PD+ V AC E   P  +RMQ+GYDHSY+F++SF++DH+  HA  L A
Sbjct:  103 EEDGWDFGTGAGFYVNATEDKWKTNYRMYSYVTEELPSVVNSNFP-VDSDRQSVFGHSMGGHGALICYLKNPGKYRSVSAFAPICNPISCPWGQKAFSGYLGSNQETWKEYDASELVKKYQGPPVD---ILIDQGTADNFLPAGQLLPDNFVAACAESKVPVVLRMQEGYDHSYYFMASFMDDHIKHHAKHLKA 292
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A7J7ZH33_PIPKU (S-formylglutathione hydrolase n=11 Tax=Eutheria TaxID=9347 RepID=A0A7J7ZH33_PIPKU)

HSP 1 Score: 256 bits (653), Expect = 9.470e-79
Identity = 121/194 (62.37%), Postives = 145/194 (74.74%), Query Frame = 2 
Query:  713 QDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFP-SLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            +DE WDFGTGAGFYVDATE  WK +YRMY YVTEELP ++ ANFP VD  + S+ GHSMGGHGAL+ A +NP KY+SVS F+ ICNPV CPWGKKAFSGYLG D++ WK YDAT L++    FP S   IL+DQG  D FL+ GQL PD+ + AC EK  P   R+Q+GYDHSY+FI++FI DH+  HA  L A
Sbjct:   43 EDESWDFGTGAGFYVDATEHPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKS---FPGSQLDILIDQGKDDQFLSDGQLLPDNFIAACAEKKTPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 232
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A0P1AY94_PLAHL (S-formylglutathione hydrolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY94_PLAHL)

HSP 1 Score: 256 bits (654), Expect = 1.580e-78
Identity = 120/205 (58.54%), Postives = 149/205 (72.68%), Query Frame = 2 
Query:  677 TRKCLPPAVGVRQDE-GWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLL 1288
            T    P  V +  DE  WDFGTGAGFYVDATEP W + YRMY YV++ELP+++ ANFP V   + S+ GHSMGGHGALV+  RNP +Y+S+S F+ I +P +CPWG KAF+GYLG D+ +WK+YDAT+LM  +GP P    IL+DQG  D FL   QL P++   ACE  GQ   +RMQDGYDHSY+FI+SFIEDH+N HAD LL
Sbjct:   53 TTDTSPRDVSIPGDEDSWDFGTGAGFYVDATEPKWDEHYRMYSYVSKELPALITANFP-VQEDRQSIMGHSMGGHGALVLGIRNPTQYQSISAFAPISHPRQCPWGIKAFTGYLGVDQESWKQYDATQLMLSHGPIPQ--SILIDQGREDTFLQEKQLLPEAFAAACESVGQKVTLRMQDGYDHSYYFIASFIEDHINHHADALL 254
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: H3G9N0_PHYRM (S-formylglutathione hydrolase n=19 Tax=Phytophthora TaxID=4783 RepID=H3G9N0_PHYRM)

HSP 1 Score: 256 bits (653), Expect = 4.850e-78
Identity = 119/205 (58.05%), Postives = 149/205 (72.68%), Query Frame = 2 
Query:  677 TRKCLPPAVGVRQDE-GWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLL 1288
            T    P  V +  DE  WDFGTGAGFYVDATEP W + YRMY YVT+ELP+++ ANFP ++  K S+ GHSMGGHGALV+  RNP +Y+S+S F+ I +P +CPWG KAF+GYLG D+ +WK+YDAT+L+   GP      IL+DQG  DNFL   QL P++   AC+  GQ   +RMQDGYDHSY+FI+SF+EDHVN HAD LL
Sbjct:   80 TMDTSPRGVSIPGDEDNWDFGTGAGFYVDATEPKWDEHYRMYSYVTKELPALITANFPVLE-DKHSIMGHSMGGHGALVLGIRNPTQYKSISAFAPISHPSQCPWGIKAFTGYLGVDQESWKQYDATQLILSQGPITQ--PILIDQGREDNFLHDKQLLPEAFEAACQSVGQKLTLRMQDGYDHSYYFIASFVEDHVNYHADALL 281
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A3R7QHJ7_PENVA (S-formylglutathione hydrolase n=5 Tax=Penaeus TaxID=133894 RepID=A0A3R7QHJ7_PENVA)

HSP 1 Score: 254 bits (650), Expect = 5.480e-78
Identity = 126/206 (61.17%), Postives = 157/206 (76.21%), Query Frame = 2 
Query:  680 RKCLPPAVGVRQDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGK-DETAWKEYDATELMRR-NGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            R C  P     +D+ WDFGTGAGFYVDATE  WK +YRM+ YVT+ELP++VAANF  V++ KA + GHSMGGHGAL+ A +NP +Y+SVS F+ ICNPV CPWG KAFSGYLG+ ++ AWKEYDA EL ++ NGP P   +I++DQG ADNFLT GQL PD+LV AC E G P  MRMQ+GYDHSY+F+++F+ DH + HA  L A
Sbjct:   57 RDCKIPG----EDDSWDFGTGAGFYVDATEEKWKTNYRMFSYVTKELPALVAANFK-VESDKAGIMGHSMGGHGALICALKNPGQYKSVSAFAPICNPVNCPWGVKAFSGYLGEGNKDAWKEYDACELAKKYNGP-PL--EIMVDQGKADNFLTQGQLLPDNLVGACAEGGVPIIMRMQEGYDHSYYFMATFMADHFDHHAKFLKA 254
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: M3XQY0_MUSPF (S-formylglutathione hydrolase n=56 Tax=Boreoeutheria TaxID=1437010 RepID=M3XQY0_MUSPF)

HSP 1 Score: 256 bits (653), Expect = 6.690e-78
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 2 
Query:  713 QDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            +DE WDFGTGAGFYVDATE  WK +YRMY YVTEELP ++ ANFP VD  + S+ GHSMGGHGAL+ A +NP KY+SVS F+ ICNPV CPWGKKAFSGYLG D++ WK YDAT L++ + P   L  IL+DQG  D FLT GQL PD+ + AC EK  P   R+Q+GYDHSY+FI++FI DH+  HA  L A
Sbjct:  103 EDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPRLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVK-SYPGSQLD-ILIDQGKDDQFLTDGQLLPDNFIAACTEKKVPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 292
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BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A7J8GJL5_MOLMO (S-formylglutathione hydrolase n=2 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8GJL5_MOLMO)

HSP 1 Score: 253 bits (646), Expect = 1.050e-77
Identity = 119/194 (61.34%), Postives = 146/194 (75.26%), Query Frame = 2 
Query:  713 QDEGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFP-SLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLLA 1291
            +DE WDFGTGAGFYVDATE  W+ +YRMY YVTEELP ++ ANFP VD  + S+ GHSMGGHGAL+ A +NP KY+SVS F+ ICNPV CPWGKKAFSGYLG D++ WK YDAT L++    +P S   IL+DQG  DNFL+ GQL P++ + AC EK  P   R+Q+GYDHSY+FI++FI DH+  HA  L A
Sbjct:   43 EDENWDFGTGAGFYVDATENPWRTNYRMYSYVTEELPQLINANFP-VDPQRMSISGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATYLVKA---YPGSQLDILIDQGKDDNFLSDGQLLPENFIAACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 232
[Close]
BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Match: A0A067BHS9_SAPPC (S-formylglutathione hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BHS9_SAPPC)

HSP 1 Score: 255 bits (651), Expect = 1.100e-77
Identity = 116/200 (58.00%), Postives = 149/200 (74.50%), Query Frame = 2 
Query:  692 PPAVGVRQD-EGWDFGTGAGFYVDATEPGWKDSYRMYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRSVSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLGKILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFISSFIEDHVNLHADRLL 1288
            P  + +  D E WDFGTGAGFYVDA EP W ++Y MY YVT+ELP++V AN P +D  K S+ GHSMGGHGAL +A +NPD Y+SVS F+ IC+P +CPWG KAF+GYLG D++ WK +DAT L+   G  P+L  IL+DQG+ D FL+  QL P++   AC++ GQP  +RMQDGYDH Y+F+SSF+EDH+N HAD LL
Sbjct:   86 PRGISIEGDSENWDFGTGAGFYVDAKEPKWAENYNMYSYVTKELPALVTANLPIID-GKQSIMGHSMGGHGALTLALKNPDLYKSVSAFAPICHPTQCPWGIKAFTGYLGTDQSTWKAHDATLLVLEKGANPNLN-ILIDQGTDDQFLSDKQLLPEAFEAACQKVGQPLTLRMQDGYDHGYYFVSSFMEDHINHHADVLL 283
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7378.16251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW3_9PHAE2.220e-10689.60S-formylglutathione hydrolase n=2 Tax=Ectocarpus T... [more]
A0A7S2UZ85_9STRA1.090e-8761.31S-formylglutathione hydrolase n=1 Tax=Fibrocapsa j... [more]
A0A6P4ZVG4_BRABE3.890e-8062.37S-formylglutathione hydrolase n=5 Tax=Branchiostom... [more]
A0A7J7ZH33_PIPKU9.470e-7962.37S-formylglutathione hydrolase n=11 Tax=Eutheria Ta... [more]
A0A0P1AY94_PLAHL1.580e-7858.54S-formylglutathione hydrolase n=1 Tax=Plasmopara h... [more]
H3G9N0_PHYRM4.850e-7858.05S-formylglutathione hydrolase n=19 Tax=Phytophthor... [more]
A0A3R7QHJ7_PENVA5.480e-7861.17S-formylglutathione hydrolase n=5 Tax=Penaeus TaxI... [more]
M3XQY0_MUSPF6.690e-7862.69S-formylglutathione hydrolase n=56 Tax=Boreoeuther... [more]
A0A7J8GJL5_MOLMO1.050e-7761.34S-formylglutathione hydrolase n=2 Tax=Molossus mol... [more]
A0A067BHS9_SAPPC1.100e-7758.00S-formylglutathione hydrolase n=2 Tax=Saprolegnia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7378contigL-elsbetiae_contig7378:1319..6952 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.0
Seed ortholog evalue5.1e-87
Seed eggNOG ortholog2880.D7FI83
KEGG rclassRC00167,RC00320
KEGG koko:K01070
KEGG ReactionR00527
KEGG Pathwayko00680,ko01120,ko01200,map00680,map01120,map01200
Hectar predicted targeting categoryother localisation
EggNOG free text desc.S-formylglutathione hydrolase activity
EggNOG OGsCOG0627@1,KOG3101@2759
EC3.1.2.12
COG Functional cat.C
CAZyCE1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionNotch domain
Ec32 orthologEc-23_003750.2
Exons6
Model size1611
Cds size501
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7378.16251.1prot_L-elsbetiae_contig7378.16251.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7378 2905..6635 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816820.910827-UTR-L-elsbetiae_contig7378:1318..21051622816820.910827-UTR-L-elsbetiae_contig7378:1318..2105Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 1319..2105 +
1691683838.8118854-UTR-L-elsbetiae_contig7378:1318..21051691683838.8118854-UTR-L-elsbetiae_contig7378:1318..2105Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 1319..2105 +
1622816820.9268498-UTR-L-elsbetiae_contig7378:2898..29041622816820.9268498-UTR-L-elsbetiae_contig7378:2898..2904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 2899..2904 +
1691683838.8235-UTR-L-elsbetiae_contig7378:2898..29041691683838.8235-UTR-L-elsbetiae_contig7378:2898..2904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 2899..2904 +
1622816821.001855-UTR-L-elsbetiae_contig7378:6635..69521622816821.001855-UTR-L-elsbetiae_contig7378:6635..6952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 6636..6952 +
1691683838.8823097-UTR-L-elsbetiae_contig7378:6635..69521691683838.8823097-UTR-L-elsbetiae_contig7378:6635..6952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7378 6636..6952 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816820.939431-CDS-L-elsbetiae_contig7378:2904..30321622816820.939431-CDS-L-elsbetiae_contig7378:2904..3032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 2905..3032 +
1691683838.8325617-CDS-L-elsbetiae_contig7378:2904..30321691683838.8325617-CDS-L-elsbetiae_contig7378:2904..3032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 2905..3032 +
1622816820.9502103-CDS-L-elsbetiae_contig7378:3687..38051622816820.9502103-CDS-L-elsbetiae_contig7378:3687..3805Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 3688..3805 +
1691683838.8418121-CDS-L-elsbetiae_contig7378:3687..38051691683838.8418121-CDS-L-elsbetiae_contig7378:3687..3805Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 3688..3805 +
1622816820.9621863-CDS-L-elsbetiae_contig7378:4445..45421622816820.9621863-CDS-L-elsbetiae_contig7378:4445..4542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 4446..4542 +
1691683838.8510103-CDS-L-elsbetiae_contig7378:4445..45421691683838.8510103-CDS-L-elsbetiae_contig7378:4445..4542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 4446..4542 +
1622816820.9756503-CDS-L-elsbetiae_contig7378:5417..54911622816820.9756503-CDS-L-elsbetiae_contig7378:5417..5491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 5418..5491 +
1691683838.8602386-CDS-L-elsbetiae_contig7378:5417..54911691683838.8602386-CDS-L-elsbetiae_contig7378:5417..5491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 5418..5491 +
1622816820.9914765-CDS-L-elsbetiae_contig7378:6551..66351622816820.9914765-CDS-L-elsbetiae_contig7378:6551..6635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 6552..6635 +
1691683838.8713472-CDS-L-elsbetiae_contig7378:6551..66351691683838.8713472-CDS-L-elsbetiae_contig7378:6551..6635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7378 6552..6635 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7378.16251.1

>prot_L-elsbetiae_contig7378.16251.1 ID=prot_L-elsbetiae_contig7378.16251.1|Name=mRNA_L-elsbetiae_contig7378.16251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
MYEYVTEELPSVVAANFPAVDTSKASVCGHSMGGHGALVVAFRNPDKYRS
VSTFSAICNPVECPWGKKAFSGYLGKDETAWKEYDATELMRRNGPFPSLG
KILLDQGSADNFLTGGQLNPDSLVKACEEKGQPCEMRMQDGYDHSYFFIS
SFIEDHVNLHADRLLA*
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mRNA from alignment at L-elsbetiae_contig7378:1319..6952+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7378.16251.1 ID=mRNA_L-elsbetiae_contig7378.16251.1|Name=mRNA_L-elsbetiae_contig7378.16251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5634bp|location=Sequence derived from alignment at L-elsbetiae_contig7378:1319..6952+ (Laminarionema elsbetiae ELsaHSoW15)
GGGCGCAGCGGGTGGCGGCCCTGCGCGGGGTGGCCCTAGTGGCGCCGGAT
ACAAGCCCGAGAGGAGCAGGAGTTGCGGGGGAGGTGGGACCCCTGTGGGC
ACCTTTTTCCTCCTCCGCCTTTAGTTCTGACGACCTTCCAGATCCGATCT
CCTGGACCAGTGGATCAGGCAGCAACGGGAGTTGATTCGCTGTCGCTGCA
GCATGTTATTTATTCTCTCTCTTTCTCTCTCTGTGTGTGTGTGTGGTAGT
GTGTAGCAAATTTCAAATTTCTCCTCGCCGAGACGTGCTTCCAACCTCCG
AATAAAAGCTTGGCCGTCTGATTGCCGGCAGGCAGCCATGTTTAGCACGT
TTTGTCTAGAAATTGTAAGAAATTTGGGGGAAGTGGGTGCTCCGTGGATT
AGGTACGGCACTTCTTATTTTACGATCCTTGCTCGCGCTATCTATCGATC
TCGCACTATTTACATACACACGCTTTAGGGCGAAGGAGGGGGCTCTGGAG
TATACTTTGTACATACATACGTGCATTGGTTTATGCCTCAGCAGCATAGG
AAAAAAGCCTACTGCTGGAGATGCTTGCTTGCGCTGCTCGATCCGTGCGC
CCCCTCAAATCGCCGAGAGATGAAACACACAAACGAGGAATTTTTGTGTG
ATGTGTATGTACATACGTAACGCCACACGCGAAAATGCCTTCCACCGGCT
GTTGGCGTTCGACAGGATGAGGGCTGGGACTTCGGAACGGGGGCGGGCTT
CTACGTAGACGCCACGGAACCGGGCTGGAAAGACAGCGTGAGTGAGAAAG
CCAAACCTCTTCTACTACTGTGTCCCTACATGCGTGCGTTGTCGGTGGGC
ACTGTGCCCCCCCCTCTCATACAAGACTTTCGTAGTGTGCTACATATGAT
TCGTCTCGCGGCCTGTGAACCCCCTCCCTCGACTTGAAGCAACCACAAGA
GCTGCTGCTGGAGTAGATGCGCGATGGTACGAACAACAACCTCCTGTGGG
ACGGCGTGAACACAAGAGCCATGCACCGCTTCTTGCGAACCGACTCTGGC
CTTCTCCCCCCTCCCTCGTCCTATGTTGTGTCGATGCTGGTGGCTCCGGA
GCAAGCTTTGCGTGCCCGAGTACCGTGAAGAAATGGACCAATCTAAAACA
CGAGCGGAAAACGGGGTGGTGTGCGTCTACAGCGTTTTGTTTTGAGGCGA
TAGGACCGTCTTGGCTTTTTCCCCTTAGTTCGGTGGAAGCCCAGGGGGCC
TTTTTTCGAGCCCCCCTCGCGGGGCGTAGCGTGCGTGGTTTTTGCCCCGC
TGTCTGCGTTAACGCGTACACTCGGACAAAGGTGTGAGGTGCATCTATAC
AGTCTGAGTTGCATCTATACAATCTGAGTTGCATCTGTACACTCCGGAGT
ATACTGACTGTGTTTATCACCTCTTTGTGCCGGGTAAACAAAATACTACG
TACCTGTACCATCCCCCCCAAGATTCTGACCTGCGGGGGTTACCGCTCCG
TCCCCCGCTCCGCACCACGCCCATGTCGCCCCCCCCCCCCCACCCCCCCC
CTGTTCCTCATATATACTGCGTCTATGTAGTACCGCATGTACGAATACGT
GACCGAGGAACTGCCGTCAGTAGTGGCGGCCAACTTCCCCGCGGTCGACA
CGTCGAAAGCCTCCGTCTGTGGGCACTCCATGGGCGGCCACGGCGCGCTG
GTGGTGGCGTTCCGGTGAGACACCAATTACACGTGCGTTAGATACCATAC
CCCCCCTCCCCCCCCTCCCGAGCAAGCGCTTCAAGCAAGACCCAGAAACT
GTACGCACGAGTTGTCGTTTTTTGCCATCGCAGCCGAAGGCGGGGTGCAG
GTGGGTTAAGTGTGTCTACAACTGCGGTGGTCACCATTGAAATTATTTTT
TCGTATATTCCCTGCCCCAAACCGAAAAACAAAAATAAAATAAAACCCCC
CATATATATAATAATTGGGTCGGAAGTATGGGTTGGGCGTAGAGGCTACG
AAACGTTTAGGAGAGCAATTGAGAACAAGGCACGATCGAGGCGTTTCGTA
CCCTTTTGATCTTGCTTCGTCGTAGAGAACGAACGAACGGCAGTGGTCTG
TTTCAAACTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCCGCATGGTACCT
AGCTTTCGTCGGCCGTCCCCTTCGTCGCGTTTTACCGAAATGATCTCTTT
CAGACGTTGCTACTGTGGTACGGACGTGTCTTGCTTGTTTGGTTGGCTGA
CTCCCTTGGACGCATGTTTCATTATTGTTGGTGTTTTTGTGGTTTGCTGC
CTCACGTATTACAAAGCATCTTCGCGTGCGTGTGTTGGCGCGCTTGACTG
CTGTGCTTCTTTTTGTCAGGAATCCCGACAAGTATCGCAGCGTCTCTACC
TTTTCTGCGATCTGCAACCCGGTGGAGTGCCCATGGGGCAAGAAGGCGTT
CTCGGGATACCTCGGGAAGGACGAGACCGCATGGAAGGTGAGAAAACAGC
TCTTGTAGCTCTCTCTCTCTCTGGTTCTTTGGTTGGCCAAGTCAGAAGCC
CATGCGCACGGGCCGTGGTATCTCTTGAGTTATATTCGCTGGTGCTACTG
TACCCACTGGAAACTGAGCCTTTGGGTGTTTTTTTTCCCTCCAAACTACG
GACCTGGATCATCGAGATGTCCCCGCTTCCGTTGCCGTGTGGAAAACGCC
GCGTTCCAGTTGAGAGCGCGTATCGGCATACTATACACGCTGTCCGCAAT
GCCCTCCCGGCACAATGAAAACGATCATCAAACTCTGACCCCACAGAGTG
GCCGTGCAGAGTTGTGGGGCCTAAACCTGGAGTCCAACCGGCAGCCCCTG
CGGCATAATTTATCCTCTTGTCGGAGGCGTGCCCCCCTCGTGACTCCCGT
GTTTGGCTTTCTCCTCTTTCTCCCCTTGTCCACGAAAGCGAGCACAAAAT
GCAACAATCCCGCAAGGAGCGCAGCTAAAAAGCTTGGCAAGAAGAGGCGT
TTTGGGGAGAAGAAGAGACGGCGAGCTAAATATGCTGTATCCGATCCGAG
CCTCGTGGCCCGCGTAGAGTCCGTCTCGATAAGACTACGACAACTGAGCG
CACTCCCGCCCCTCTCGTTCCTCGCAGGAGTACGATGCGACGGAGCTAAT
GCGGCGAAATGGCCCGTTCCCGAGCCTCGGCAAGATCCTTCTCGACCAGG
GGTCGGCGGACAACTTTCTGACAGGTGGGGTGAAAATGCGTATTTGTCGT
TTTATTGGAAGTGGGTTGCGTATAGTTGCTGTTGTATTGGTGTTAACGGT
GTGGTCGTGTTGCTGTGGATATCATCTCCCTTGTCATGTTTTGGTCCACG
TTGTGCTTCAGATATTCTTTGACGCTCGCAGCACACTCTGAATAGGAAAA
TCAATAAATCAAAAATGGAACCTTTCGCCTCTAACACCGGTGTTCATAGA
AAAAAAATCCTGATGCAAATAATCAAAATCTTGCTTATTTCGACCTTTGT
GGCCACTTTTCCTCGCCGAGAGCTCCGAATTAGATTTTCGCTACTTGGAC
GTTTTCGAAGCTCTCCTCTAGAGGTTACCCATTACATAGCTGTCCAATCT
GGCACACTCCGGGTCCGGTTGTTGTCCTCGGAGCAAGATTTGGCTAGATT
TGGATTCAGCCAACATTTGCAAAACCTCGAAATCTTGGCCAAATGTAGCC
AAACCTTGCTCCGAGGACAACAACCGAACTCGGCGTGTGCCAGATTGGAC
AGCTATGTAATGGGTAGACCTCTAAAGGACAGGTTCGAAAGTGTCCAAGT
AGCAAAAATCTGGTTCGGAGCTCTCGGCGAGAAAACGTGACCACAAAAGT
CAAAGTAAGCAAGATTTTGATTATCAGGATTGTTTTTCTATAAACACCGG
TGTTAGAAGCGGGACTCTGCGAGATTAAAACGCTACTTTTTATGAATGTT
GCCTGCTGTCTACTGGTTGTTGTGAGCTGAGAAATACCGAGCGAGCGGCA
CATGGCTTTCGATCTTTCGATGGTCCAAGGTCGACCGCAATTAGCCCACC
GGCAAAGGCGTAATCGTTCCCCGTTTGTTCTGTTTTGCCCTGCGACCAGG
CGGGCAGCTGAACCCGGACTCGCTGGTCAAGGCGTGCGAAGAAAAGGGCC
AGCCGTGCGAGATGCGCATGCAGGTAAAGGTTTTATTAAAATTAATGCTT
TTGAAGCTGAAAAAGGTGGATTATTTTGTGAAAAATATTTGGATTCAAAA
CTCAAGATTGTACATACCTATGGTACACTTTTTTTAATTAGTTTCCTTGT
TACCTTCAAAACATTAAAATTCACCTTATTTAGAGCCTGTCGGGGCCGGC
CAACACAGATGTAAGTACAGCCGCCTGTTTCGCCCCAGGCCTCACTCACG
CTCGGGCGCGCCTGTCTGCCTGCCTGCTTGCCTGCTGCGCTGCGCGCCCA
AGTTTGATTGTTTTTTCGTCTCTAACTCCAGTCGTATATCTTTTGTGAGG
GTTGGGGTACACACAGTGGCATTGTAATCGAGTGGTTTGTTTCTATCCTG
GGCATTTGTGTAGTGATATATGTTTTTTTGTGTTGGGCTGCATTTGTGTG
GGTCGTCATTTCTAGACGTACATACGTACATGTGTAGCATGCCGCTCGCG
GGGCTCATCGCGACCTGCTTTTTTCCTTTTCAAGAAGCACGCCTCTCGTC
GCGTAGATAAGTAGAGCAAGGCTCGACACCTCCACCAGCCCTCACGATCT
GCCTTGCCTGAGTTCCTGCCCCTTTCGCGTTTTCCTTTTGTTTATTTTCT
TGGTGAGTCGTCCCCTTGGAGTTCTCGCCAAGCACCCCCATGACCCCAGC
ACCGCGCCCCCTATAGAGAGAAATATGGTGGCCTATCAAAACCCGCAATA
TACGAGGAGGGAGCTGAAAACAGTTACCAATGACCGGGCGTGAGTTTGGG
TTGTGTCCAGCAGCAGTGAGAAATGGTGGTTCTGAAAGACGAAAAAGGCA
ACTGCTGTACCTAGATGTCGCCGAAGATAACCCACCTACACTGAAACGCC
ATCGAGTGGAGAGAACACATCGTTGGACTGGTTGCAACCGGTTCCGCGAG
AGAGGTGCTTTCCCTGAATACGTATGGAGTCTTTACACAGCGCCCCTCAC
TCCTCGCGATCTACCTGATAAACCTCACCCCTCCCTCTCTCACCCCAAAC
TGCTCTTGACGCGTTTTTTTTCGTTTGTGCCAGGACGGGTACGATCACAG
CTACTTCTTCATCAGCAGCTTCATCGAGGACCACGTCAACCTGCACGCCG
ACCGCCTTTTGGCATGAGCGCGCACGTTGATTCTGTGGAATGTTTGCCCC
CAGTTCTTCAGCAGCCACCAGTGGAGTGGGTGGAATCATTGGGCATCTGA
GTTTGCCGGTTGGAACTTCCGTCTCGGATTACCGTACGATGTCGCCGTGT
GTATCCCCAGGATAGAAGTTGTGTGCGTTAGTGTGTGCATGGACGCTATA
GGTTCAACGTGCAGAGTTAGGGCTACGCGCTACGACTCGAGAACAATTGT
GAAATACTAAATACAATACACAGGAGCTTACAAAAGCTTCTCTGAACACA
TCGCCTCCGCCCCGACGCGCCCCGCGTGACCCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7378:1319..6952+

>mRNA_L-elsbetiae_contig7378.16251.1 ID=mRNA_L-elsbetiae_contig7378.16251.1|Name=mRNA_L-elsbetiae_contig7378.16251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig7378:1319..6952+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGAATACGTGACCGAGGAACTGCCGTCAGTAGTGGCGGCCAACTT
CCCCGCGGTCGACACGTCGAAAGCCTCCGTCTGTGGGCACTCCATGGGCG
GCCACGGCGCGCTGGTGGTGGCGTTCCGATGTACGAATACGTGACCGAGG
AACTGCCGTCAGTAGTGGCGGCCAACTTCCCCGCGGTCGACACGTCGAAA
GCCTCCGTCTGTGGGCACTCCATGGGCGGCCACGGCGCGCTGGTGGTGGC
GTTCCGGAATCCCGACAAGTATCGCAGCGTCTCTACCTTTTCTGCGATCT
GCAACCCGGTGGAGTGCCCATGGGGCAAGAAGGCGTTCTCGGGATACCTC
GGGAAGGACGAGACCGCATGGAAGGAATCCCGACAAGTATCGCAGCGTCT
CTACCTTTTCTGCGATCTGCAACCCGGTGGAGTGCCCATGGGGCAAGAAG
GCGTTCTCGGGATACCTCGGGAAGGACGAGACCGCATGGAAGGAGTACGA
TGCGACGGAGCTAATGCGGCGAAATGGCCCGTTCCCGAGCCTCGGCAAGA
TCCTTCTCGACCAGGGGTCGGCGGACAACTTTCTGACAGGAGTACGATGC
GACGGAGCTAATGCGGCGAAATGGCCCGTTCCCGAGCCTCGGCAAGATCC
TTCTCGACCAGGGGTCGGCGGACAACTTTCTGACAGGCGGGCAGCTGAAC
CCGGACTCGCTGGTCAAGGCGTGCGAAGAAAAGGGCCAGCCGTGCGAGAT
GCGCATGCAGGCGGGCAGCTGAACCCGGACTCGCTGGTCAAGGCGTGCGA
AGAAAAGGGCCAGCCGTGCGAGATGCGCATGCAGGACGGGTACGATCACA
GCTACTTCTTCATCAGCAGCTTCATCGAGGACCACGTCAACCTGCACGCC
GACCGCCTTTTGGCATGAGACGGGTACGATCACAGCTACTTCTTCATCAG
CAGCTTCATCGAGGACCACGTCAACCTGCACGCCGACCGCCTTTTGGCAT
GA
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