mRNA_L-elsbetiae_contig7367.16238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7367.16238.1
Unique NamemRNA_L-elsbetiae_contig7367.16238.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: D8LSU7_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU7_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.750e-79
Identity = 337/628 (53.66%), Postives = 360/628 (57.32%), Query Frame = 1
Query:    1 QVYRALIHLDCDWLVLSSYKIHCRWKPNAPTPLNKGSFLSSSTSCPSLKAAGGAGRLGASMYPSSXXXXXXXXXSSGLVINGSGGATPFTALLEGVPEV-DSVCSTPPIASPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGGRKT--LMEVCGGGDGSAPPAEPCGKSPEASPPSKHPGAVRNGPAVAMGAVAVAAESGTENGGIXXXXXXXXXXXXVEGLALGGGASASCGVGGREDXXXXXXDAVDGSENRDPRKIA-KGAVVGAPAAAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAFSPAV----------GNKAGGG----GPTEAVRETKGIL-APGDGGRNGSSPSNGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRGATSGGPNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQTSTAALEQSRPSHRRSASESSGGARGRSIGAIXXXXERGSPSAGRKHAAHSLMTLAQLHKRPAVSK--NGRSGGSPVPASAP-ARKETGV 1818
            +VYRALIHL CDW V+SSYKIHCRWKPN PTP NK  FLS STSCPSLK    A    AS  P            SGL++NG GG  PFTALLE VPEV DS CSTP +ASPT      XXXXXXXXXXXXX          VTG  K   L +   GG G   P+E CG     S        V NGPA    +    A  G+    +    XXXXXXXX                     XXXXXX A+DG+EN+DPR  A K A +G  AA                     XXXXXXXXXXXXXXXXXXXXXXXXXX                                             TPAFSP V          G  AGGG     PT+A   T     A GDG RNG     GP        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G  G       TS+PF +PDFVIK+CLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQ+INQLKMLSAQSKQ STAALE+SRPSHRRSASESSGGARGR     XXXX   SPSAGRKHAAHSLMTLAQLHKR AVSK   G  G S VP++AP AR+E G 
Sbjct:    3 EVYRALIHLGCDWRVISSYKIHCRWKPNTPTPPNKAPFLSVSTSCPSLKDKLSA----ASASP------------SGLLVNGGGGVNPFTALLERVPEVVDSACSTPALASPTSSVRGAXXXXXXXXXXXXX----------VTGDSKQQPLEQRGDGGRGDGSPSELCGXXXXXS--------VSNGPAATGESDGDRAAPGSTEASLETAAXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXAMDGNENQDPRAAANKAASLGRAAAE----------------DGVAXXXXXXXXXXXXXXXXXXXXXXXXXXCQARPPPRHGAAAGARCEEGWGGNRGDGDVDGDVSMPSGPAVLSFTPAFSPGVDRTNSSSTAKGVAAGGGWKAASPTDAPATTSPPSPASGDGRRNG-----GPWRSGLRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAPGSLGGA-----TSNPFLKPDFVIKVCLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQVINQLKMLSAQSKQMSTAALERSRPSHRRSASESSGGARGRPXXXXXXXX---SPSAGRKHAAHSLMTLAQLHKRAAVSKIVPGPGGSSAVPSAAPPARQEEGA 565          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A6H5J9V4_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V4_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 2.080e-52
Identity = 318/635 (50.08%), Postives = 336/635 (52.91%), Query Frame = 1
Query:    1 QVYRALIHLDCDWLVLSSYKIHCRWKPNAPTPLNKGSFLSSSTSCPSLKAAGGAGRLGASMYPSSXXXXXXXXXSSGLVINGSGGATPFTALLEGVPEV-DSVCSTPPIASPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGGRKTLMEVCGGGDGSAPPAEPCGKSPEASPPSKHPGAVRNGPAVAMGAVAVAAESGTENGGIXXXXXXXXXXXXVEGLALGGGASASCGVGGREDXXXXXXDAVDGSENRDPRKIAKGAVVGAPAAAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAFSP----------AVGNKAGGGGPTEAVRETKGIL-----APGDGGRNGSSPSNGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRGATSGGPN-----TSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQTSTAALEQSRPSHRRSASESSGGARGRSIGAIXXXXERG-----SPSAGRKHAAHSLMTLAQLHKRPAVSK--NGRSGGSPVPASA-PARKETGV 1818
            +VYRALIHL CDW V+SSYKIHCRWKPNAP P NK  FLS+STSCPSLK    A    AS  P            SG ++NG GG TPFTALLE VPEV DS CSTPP+ASPT   XXXXXXXXXXXXXXXXXXXXXXXXXX                                                                 XXXXXXXXXXXX                     XXXXXX                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               TPAFSP          + G  AGGG    +             A GDG RNG    +G                    XXXXXXXXXXXXXXXXXXXXX      ATS  P      TS+PF +PDFVIK+CLTLYKVQNQIYLLDFQKLEGDPFGFMS+CSQ+INQLKMLSAQSKQ STAALE+SRPSHRRSASESSGGARG           RG     SPSAGRKHAAHSLMTLAQLHKR AVSK   G  G S VP++A P R+E G 
Sbjct:  549 EVYRALIHLGCDWRVISSYKIHCRWKPNAPMPPNKAPFLSASTSCPSLKDKLSA----ASASP------------SGFLVNGCGGVTPFTALLERVPEVVDSACSTPPLASPTSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQCQARPPPRRGAPAGARCEEGRGGNRGDEDVDGDVSVPSGPAVLSLTPAFSPGGDRTNNSTTSKGVAAGGGWKDASYAGAPSATSAPSSASGDGRRNGGPGRSG----------------LRAGXXXXXXXXXXXXXXXXXXXXXVPATAAATSSAPGSLGGATSNPFLKPDFVIKVCLTLYKVQNQIYLLDFQKLEGDPFGFMSVCSQVINQLKMLSAQSKQMSTAALERSRPSHRRSASESSGGARG--------LPGRGXXXXXSPSAGRKHAAHSLMTLAQLHKRAAVSKIVPGSGGSSAVPSAALPGRQEGGA 1090          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S3M690_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M690_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.250e-10
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1387 PFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSK 1554
            P   PD  +KI L+LYKVQ  IYLLDFQ++EGD FGFM LC+ II +LK LSA S+
Sbjct:  121 PAHTPDANVKIALSLYKVQQNIYLLDFQRVEGDAFGFMKLCAFIITELKNLSAASR 176          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S1H032_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H032_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.280e-10
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1372 PNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQS 1551
            PN S+     D+ IKI LTLYKVQ  IYLLDFQK+ GD F FM+LC+ II +LK LSA S
Sbjct:   43 PNLSTQ----DYCIKIGLTLYKVQQSIYLLDFQKMTGDAFSFMTLCANIITELKTLSAAS 98          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S3XPF7_HETAK (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPF7_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 1.710e-10
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1366 GGPNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQTSTAAL 1575
            GG   + P +  D+ +   L+LYKVQ  IYLLDFQK EGD F FM L ++II QLK LSAQSKQ   A L
Sbjct:  120 GGGPPAGPRQAADYEVVAALSLYKVQQHIYLLDFQKAEGDAFSFMELAARIITQLKALSAQSKQLLQAQL 189          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S3XPF6_HETAK (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPF6_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 5.070e-10
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1366 GGPNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQTSTAAL 1575
            GG   + P +  D+ +   L+LYKVQ  IYLLDFQK EGD F FM L ++II QLK LSAQSKQ   A L
Sbjct:  195 GGGPPAGPRQAADYEVVAALSLYKVQQHIYLLDFQKAEGDAFSFMELAARIITQLKALSAQSKQLLQAQL 264          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A6U3RXK7_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RXK7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.180e-10
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1399 PDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSK 1554
            PD+ IKI LTLYKVQ  IYLLDFQK+ GD F FM+LC+ II +LK LSA SK
Sbjct:  641 PDYCIKIGLTLYKVQQSIYLLDFQKMTGDAFSFMTLCANIITELKTLSAASK 692          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S2WHL7_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WHL7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 8.180e-10
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 1372 PNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQ 1557
            PN S+P    ++ IKI LTLYKVQ  IYLLDFQK+ GD F FM+LC+ II +LK LSA +KQ
Sbjct:  652 PNLSTP----EYCIKIGLTLYKVQQNIYLLDFQKMTGDAFSFMTLCANIITELKTLSAANKQ 709          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S3ZZ19_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ19_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.870e-10
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1399 PDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSK 1554
            PD+V+++ LTLYKVQ  I+LLDFQ  EGD FGFMSLC++II +LK LSA S+
Sbjct:  508 PDYVVRVTLTLYKVQQNIFLLDFQNGEGDCFGFMSLCARIIKELKALSAASR 559          
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Match: A0A7S2W5U8_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5U8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.650e-9
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 1372 PNTSSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQLKMLSAQSKQ 1557
            P+  SP    +F IKI LTLYKVQ  IYLLDFQKL+G+PF FM+LC++II +LK LS  S+Q
Sbjct:  468 PSPGSPHPANEF-IKIYLTLYKVQPSIYLLDFQKLDGNPFDFMTLCARIITELKALSQASRQ 528          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7367.16238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU7_ECTSI1.750e-7953.66Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5J9V4_9PHAE2.080e-5250.08Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3M690_9STRA1.250e-1062.50Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S1H032_9STRA1.280e-1061.67Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3XPF7_HETAK1.710e-1055.71Non-specific serine/threonine protein kinase (Frag... [more]
A0A7S3XPF6_HETAK5.070e-1055.71Non-specific serine/threonine protein kinase (Frag... [more]
A0A6U3RXK7_9STRA6.180e-1069.23Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S2WHL7_9STRA8.180e-1061.29Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3ZZ19_9STRA8.870e-1065.38Non-specific serine/threonine protein kinase n=2 T... [more]
A0A7S2W5U8_9STRA1.650e-961.29Non-specific serine/threonine protein kinase n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7367contigL-elsbetiae_contig7367:730..5518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score72.8
Seed ortholog evalue6e-10
Seed eggNOG ortholog159749.K0R246
Preferred namePRKAA2
KEGG koko:K07198,ko:K12761,ko:K21989
KEGG Pathwayko04068,ko04113,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04113,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000082,GO:0000086,GO:0000166,GO:0000187,GO:0000226,GO:0000278,GO:0000302,GO:0000307,GO:0000322,GO:0000323,GO:0000324,GO:0000902,GO:0000904,GO:0001101,GO:0001302,GO:0001403,GO:0001558,GO:0001666,GO:0001678,GO:0001932,GO:0001934,GO:0002791,GO:0002792,GO:0002793,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0004690,GO:0004691,GO:0004693,GO:0004703,GO:0004712,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005654,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0005996,GO:0006006,GO:0006082,GO:0006109,GO:0006110,GO:0006111,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006259,GO:0006260,GO:0006325,GO:0006355,GO:0006417,GO:0006464,GO:0006468,GO:0006629,GO:0006631,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006950,GO:0006974,GO:0006977,GO:0006979,GO:0006986,GO:0006995,GO:0006996,GO:0007005,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007093,GO:0007098,GO:0007099,GO:0007124,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0007548,GO:0007568,GO:0007569,GO:0007584,GO:0007610,GO:0008022,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0008340,GO:0008361,GO:0008406,GO:0008610,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009272,GO:0009311,GO:0009313,GO:0009314,GO:0009409,GO:0009410,GO:0009411,GO:0009416,GO:0009453,GO:0009593,GO:0009594,GO:0009605,GO:0009628,GO:0009631,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009743,GO:0009746,GO:0009749,GO:0009755,GO:0009756,GO:0009791,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010050,GO:0010150,GO:0010182,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010389,GO:0010468,GO:0010494,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010769,GO:0010770,GO:0010821,GO:0010822,GO:0010827,GO:0010828,GO:0010829,GO:0010876,GO:0010893,GO:0010906,GO:0010907,GO:0010941,GO:0010948,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0014074,GO:0014823,GO:0014850,GO:0015030,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016052,GO:0016202,GO:0016236,GO:0016239,GO:0016241,GO:0016301,GO:0016310,GO:0016324,GO:0016358,GO:0016569,GO:0016570,GO:0016572,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0017148,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019207,GO:0019209,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019395,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019722,GO:0019725,GO:0019752,GO:0019887,GO:0019899,GO:0019900,GO:0019904,GO:0019915,GO:0019932,GO:0019954,GO:0022008,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030258,GO:0030295,GO:0030330,GO:0030332,GO:0030424,GO:0030425,GO:0030447,GO:0030554,GO:0030674,GO:0030730,GO:0030808,GO:0030810,GO:0030811,GO:0030813,GO:0031000,GO:0031023,GO:0031156,GO:0031175,GO:0031285,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031505,GO:0031570,GO:0031571,GO:0031588,GO:0031593,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033157,GO:0033500,GO:0033554,GO:0033674,GO:0033993,GO:0034248,GO:0034249,GO:0034284,GO:0034440,GO:0034599,GO:0034614,GO:0034641,GO:0034645,GO:0034654,GO:0034694,GO:0034695,GO:0034762,GO:0034763,GO:0034764,GO:0035088,GO:0035173,GO:0035174,GO:0035262,GO:0035404,GO:0035556,GO:0035639,GO:0035690,GO:0035770,GO:0035966,GO:0036094,GO:0036211,GO:0036267,GO:0036270,GO:0036279,GO:0036293,GO:0036294,GO:0036464,GO:0036477,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042149,GO:0042221,GO:0042304,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042493,GO:0042542,GO:0042546,GO:0042556,GO:0042557,GO:0042592,GO:0042593,GO:0042594,GO:0042595,GO:0042710,GO:0042752,GO:0042770,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043279,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043467,GO:0043470,GO:0043549,GO:0043562,GO:0043900,GO:0043933,GO:0044010,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044271,GO:0044275,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044839,GO:0044843,GO:0045137,GO:0045177,GO:0045178,GO:0045197,GO:0045229,GO:0045471,GO:0045540,GO:0045542,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045722,GO:0045786,GO:0045787,GO:0045792,GO:0045821,GO:0045833,GO:0045834,GO:0045844,GO:0045859,GO:0045860,GO:0045893,GO:0045913,GO:0045923,GO:0045927,GO:0045930,GO:0045935,GO:0045937,GO:0045940,GO:0045981,GO:0046015,GO:0046034,GO:0046317,GO:0046318,GO:0046320,GO:0046321,GO:0046324,GO:0046325,GO:0046326,GO:0046352,GO:0046390,GO:0046483,GO:0046677,GO:0046777,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046889,GO:0046890,GO:0046956,GO:0048364,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048827,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0048878,GO:0050708,GO:0050709,GO:0050714,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050810,GO:0050896,GO:0050920,GO:0050921,GO:0050994,GO:0050995,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051055,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051222,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051270,GO:0051272,GO:0051276,GO:0051291,GO:0051298,GO:0051321,GO:0051338,GO:0051347,GO:0051493,GO:0051592,GO:0051606,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0052128,GO:0055081,GO:0055082,GO:0055086,GO:0055088,GO:0055089,GO:0055114,GO:0060090,GO:0060176,GO:0060249,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0060627,GO:0060968,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061245,GO:0061458,GO:0061695,GO:0061744,GO:0061762,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0070201,GO:0070301,GO:0070482,GO:0070507,GO:0070542,GO:0070726,GO:0070783,GO:0070887,GO:0070925,GO:0071156,GO:0071158,GO:0071215,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071277,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071361,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071417,GO:0071453,GO:0071456,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071731,GO:0071732,GO:0071840,GO:0071852,GO:0071900,GO:0071902,GO:0071940,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072521,GO:0072522,GO:0080022,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090043,GO:0090066,GO:0090068,GO:0090087,GO:0090153,GO:0090155,GO:0090181,GO:0090205,GO:0090304,GO:0090311,GO:0090316,GO:0090407,GO:0090604,GO:0090606,GO:0090693,GO:0097009,GO:0097124,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0097366,GO:0097367,GO:0097447,GO:0097458,GO:0097472,GO:0097574,GO:0097708,GO:0098534,GO:0098590,GO:0098772,GO:0099004,GO:0099402,GO:0106118,GO:0106120,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140030,GO:0140096,GO:1900060,GO:1900076,GO:1900077,GO:1900371,GO:1900373,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901261,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901563,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901861,GO:1901863,GO:1901983,GO:1901985,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902170,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902554,GO:1902667,GO:1902669,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902911,GO:1902930,GO:1902932,GO:1903047,GO:1903108,GO:1903109,GO:1903214,GO:1903432,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903532,GO:1903533,GO:1903578,GO:1903580,GO:1903664,GO:1903665,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1903955,GO:1904262,GO:1904428,GO:1904950,GO:1904951,GO:1905038,GO:1990234,GO:1990794,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000241,GO:2000303,GO:2000756,GO:2000758,GO:2000765,GO:2000766,GO:2001141,GO:2001169,GO:2001171,GO:2001273,GO:2001274
EggNOG free text desc.serine threonine protein kinase
EggNOG OGs2XBAE@2836,KOG0583@1,KOG0583@2759
EC2.7.11.1,2.7.11.11
COG Functional cat.T
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko02000,ko03029,ko04131
Ec32 ortholog descriptionSerine/threonine protein kinase
Ec32 orthologEc-26_001490.1
Exons5
Model size2040
Cds size1737
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.9351888-UTR-L-elsbetiae_contig7367:729..8521622816819.9351888-UTR-L-elsbetiae_contig7367:729..852Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 730..852 -
1691683838.1459239-UTR-L-elsbetiae_contig7367:729..8521691683838.1459239-UTR-L-elsbetiae_contig7367:729..852Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 730..852 -
1622816819.9961572-UTR-L-elsbetiae_contig7367:4795..49151622816819.9961572-UTR-L-elsbetiae_contig7367:4795..4915Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 4796..4915 -
1691683838.2152803-UTR-L-elsbetiae_contig7367:4795..49151691683838.2152803-UTR-L-elsbetiae_contig7367:4795..4915Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 4796..4915 -
1622816820.0064075-UTR-L-elsbetiae_contig7367:5458..55181622816820.0064075-UTR-L-elsbetiae_contig7367:5458..5518Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 5459..5518 -
1691683838.2255423-UTR-L-elsbetiae_contig7367:5458..55181691683838.2255423-UTR-L-elsbetiae_contig7367:5458..5518Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7367 5459..5518 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.9478014-CDS-L-elsbetiae_contig7367:852..10141622816819.9478014-CDS-L-elsbetiae_contig7367:852..1014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 853..1014 -
1691683838.1612482-CDS-L-elsbetiae_contig7367:852..10141691683838.1612482-CDS-L-elsbetiae_contig7367:852..1014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 853..1014 -
1622816819.9610407-CDS-L-elsbetiae_contig7367:2029..22691622816819.9610407-CDS-L-elsbetiae_contig7367:2029..2269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 2030..2269 -
1691683838.1783805-CDS-L-elsbetiae_contig7367:2029..22691691683838.1783805-CDS-L-elsbetiae_contig7367:2029..2269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 2030..2269 -
1622816819.9724486-CDS-L-elsbetiae_contig7367:3022..31001622816819.9724486-CDS-L-elsbetiae_contig7367:3022..3100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 3023..3100 -
1691683838.188556-CDS-L-elsbetiae_contig7367:3022..31001691683838.188556-CDS-L-elsbetiae_contig7367:3022..3100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 3023..3100 -
1622816819.9836738-CDS-L-elsbetiae_contig7367:3538..47951622816819.9836738-CDS-L-elsbetiae_contig7367:3538..4795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 3539..4795 -
1691683838.2013369-CDS-L-elsbetiae_contig7367:3538..47951691683838.2013369-CDS-L-elsbetiae_contig7367:3538..4795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7367 3539..4795 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7367.16238.1prot_L-elsbetiae_contig7367.16238.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7367 853..4795 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7367.16238.1

>prot_L-elsbetiae_contig7367.16238.1 ID=prot_L-elsbetiae_contig7367.16238.1|Name=mRNA_L-elsbetiae_contig7367.16238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=579bp
MYPSSSSSSSSSSCSSGLVINGSGGATPFTALLEGVPEVDSVCSTPPIAS
PTCSSPAAAGAGAAAAAAAGAGAARRPGGGAVTGGRKTLMEVCGGGDGSA
PPAEPCGKSPEASPPSKHPGAVRNGPAVAMGAVAVAAESGTENGGIGGGG
GGGRGSGGVEGLALGGGASASCGVGGREDDDGDDDDAVDGSENRDPRKIA
KGAVVGAPAAAVASTATATVKSPKARRQVTPAAAAAAVAGRQCRAEPPPP
PQQQQRQGQERQQSGGADAAAAGGRGEGEVGDEDGDLPMLSLSPAPAPTL
TLTPAFSPAVGNKAGGGGPTEAVRETKGILAPGDGGRNGSSPSNGPAGKT
GDRASRDGGRGSGPGGVGAMGVVAAAAAAASAAAVAAEGGRGATSGGPNT
SSPFRQPDFVIKICLTLYKVQNQIYLLDFQKLEGDPFGFMSLCSQIINQL
KMLSAQSKQTSTAALEQSRPSHRRSASESSGGARGRSIGAIGAIGERGSP
SAGRKHAAHSLMTLAQLHKRPAVSKNGRSGGSPVPASAPARKETGVVSSS
RRSVDGHAHGRGRSHAHAHAVDGMDTSA*
back to top

mRNA from alignment at L-elsbetiae_contig7367:730..5518-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7367.16238.1 ID=mRNA_L-elsbetiae_contig7367.16238.1|Name=mRNA_L-elsbetiae_contig7367.16238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4789bp|location=Sequence derived from alignment at L-elsbetiae_contig7367:730..5518- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTCTACCGCGCTCTGATTCACCTCGACTGCGACTGGCTGGTGCTGTC CTCGTACAAGGTGGGGGGTTGTGTTGTCGTCGACTTTTTTGTGGCCACAG ACCCCATTACCTTGCGAGAAGGGCCAGTATAATTCGCTCAAACCGGAGCT TAACTCCTCAGGAATCTCGGTGTGCAGCTGGTCGCTGAGGGTGAGTCGCT CGCCGCGGTCTATCTCGTGTGGTGTGTTGGGGGGGGGTTATTTTTACATG TAAGCCGAGCCTCAATCCCTAGTGGTCGGTCAGACTCTCAAACACCCCAA GTGCAAGACTGGTTCGTTTTTTTTTTTTCTTCTTTCCCTCCCATTATTGG CTTGTTCGTCATCTGCCCCACTGGCCCCCTTCCTCCACTACGACTAGCTA GACAACCCAACCGGCATCACACGGGCAGAAGGGGCCCCGTCTAATCAGGA TGACTGCTTGCATATATGCATAGGCCGAGACACGGCATGCTACACACACA CGCGCGTTTGACTCACCTGCACAAGCATCTGTTCGCGCGTCCCGGTCCCC GTTGCGCTCACCCCACGCCACCCCCGGGTCGGTCGGCCCCGACCTTCCCT CAGATACACTGCCGGTGGAAGCCGAACGCCCCGACGCCGCTGAACAAGGG CTCGTTCCTGTCGTCATCGACCTCGTGCCCCAGCCTCAAGGCGGCGGGGG GGGCGGGGAGGCTTGGCGCCTCGATGTACCCGTCGTCGTCGTCGTCGTCG TCGTCCTCCTCCTGTTCGAGCGGGCTCGTGATCAACGGCAGCGGGGGCGC CACCCCCTTCACGGCGTTGCTGGAGGGCGTCCCCGAGGTGGACTCGGTGT GTTCCACGCCCCCCATCGCGAGCCCGACGTGTTCCTCTCCTGCTGCCGCG GGAGCAGGGGCGGCGGCGGCAGCGGCGGCGGGGGCAGGGGCGGCGCGGCG TCCCGGCGGGGGGGCCGTGACTGGAGGTAGGAAAACTCTGATGGAGGTAT GCGGGGGGGGCGATGGTTCGGCTCCACCTGCGGAGCCTTGCGGCAAGAGC CCCGAGGCATCGCCGCCATCGAAGCACCCCGGAGCCGTGAGGAATGGCCC GGCGGTGGCGATGGGGGCGGTAGCGGTGGCGGCGGAGAGTGGCACAGAGA ACGGCGGCATAGGCGGCGGCGGCGGCGGCGGCCGTGGGTCAGGGGGGGTG GAGGGGCTGGCCCTGGGGGGGGGCGCGTCAGCGAGCTGCGGGGTCGGTGG TCGAGAAGACGACGACGGTGACGACGATGACGCCGTGGACGGCAGCGAAA ATAGGGACCCGAGAAAGATTGCGAAGGGGGCGGTGGTCGGAGCGCCGGCA GCGGCGGTGGCGTCGACGGCGACGGCGACGGTGAAGAGCCCGAAAGCCCG ACGGCAGGTCACGCCCGCGGCTGCGGCTGCGGCAGTGGCAGGGCGGCAGT GCCGAGCTGAACCACCGCCGCCGCCACAGCAACAGCAGCGGCAAGGTCAG GAGCGACAGCAGTCCGGTGGTGCCGATGCTGCTGCCGCTGGCGGGCGCGG AGAGGGCGAGGTTGGCGACGAGGATGGTGATTTACCAATGCTGTCGCTGT CGCCAGCGCCAGCGCCAACGCTGACGCTGACCCCGGCGTTCTCACCGGCC GTGGGTAACAAGGCCGGCGGCGGTGGCCCCACGGAGGCGGTGAGGGAAAC CAAAGGTATTCTAGCACCCGGGGACGGCGGCAGAAACGGCAGCTCTCCGT CGAATGGCCCGGCCGGAAAAACCGGTGACCGGGCGAGTCGCGATGGCGGC AGAGGCTCAGGGCCCGGGGGCGTTGGGGCGATGGGCGTTGTGGCTGCCGC TGCCGCTGCCGCTTCTGCTGCTGCTGTTGCCGCGGAGGGTGGCCGTGGCG CGACTTCCGGCGGGCCAAACACCTCGAGCCCGTTCCGGCAGCCGGACTTC GTCATCAAGATTTGTCTGACGCTGTACAAGGTGAGGGGCGGTGGTGGTGG TGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAAAAGGAAGGATG TGTTATCGGGCCAGAAAATTGAACTCTCACTACTGCTGTTGCATCCCATC GGTACAATAGGTAGTACGTACCGTTTGTACGTATTTTTCGAGCGCGTGGT TCATGTCTTTGGGGGAGCTTTTTTTTTTTTGGCACTGCGCCGGCCTCGGG GCGTGTCTGACCTGATAGACGTGATCCAGAGCCGGAACTCCCCTTGGCGT GACCGTCCGGTTGAAAGGTTTTCTCACGTTGAGGTGGGACCCTGTGGCAC GGGGTACGGATTGCGTGTGTTGCGTGGGTCTTCTGCCCGCCGCTCCCCGA CGGCTGTGTCGTGGCGGTTTTTCACGCTCGGCCCTTTTTTGCCTGCCTCT CCCGCCTCTCCGTTTCAGGTCCAAAATCAGATCTACCTGCTGGATTTCCA GAAGCTGGAAGGCGATCCTTTCGGTTTCATGAGCCTCTGTTCGCAGGTAT TTTTGCTCGGGGGTTCGTGTCTGTTGCGGAAAAGTGGTGGTTCGCACGCG TTCTAGGCGCGGGTCCCGTGTTGCCTCTTTTGGAGCAGGAAGTTTGCTCG ATGTGTATGCTGCTTATAGATAAATGGTTTGCTGGTGTCGTTGTTTTGTA GGCAAGTGTGTGCCTGCGCATTTCTCACGAGTGTTCACGGTGCTGCTTGA CATGCGGGGGGGTTGTTTTGCGACATGGGGGCCGTGTCGCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCACCACATCACTACTGC NNNNNNNNNNGGTTGGGCCGGGTGCTTTCCCCCCAGGGTTGAGGGGGGCG CTGGCCAGGGGGGGGGGGTGGTTTTCGACGGGGGGGCCCGGTCCCCCCCC CCCCCCCCCCCCCCCTAAGCATGACACCCGCTTGACATACCTATAGCTTA TTCACGTGAGGCGTTTTTCTGCACATTTTTCAGCCAAATATTTATAATTT GATTGGATTCATTCGATTTTGCCGTACTTGGCGTGCTGCTTACACGTGCG CACCCCCTTCTCTTTTGGCATCGAAAAGCTATGTACCTAGCATTTTCGCC TCTAACCTGACTTGAAACGATACGCCTTCTAAATCTGAAGCAGAGACTTC CTCAAGTCAGATTTACCAGCATCCGCCCTCCGCCCTCTAAACGCCTCTCT CTCTCTCCTCTTTCTCCCTCCCTCTGTTGTCCCGGATACATCTCCGTAGA TCATCAACCAGCTCAAGATGCTGAGCGCGCAGAGCAAGCAGACATCCACC GCCGCGCTCGAGCAGAGCAGGCCGTCCCACCGCCGGAGCGCCAGCGAGAG CAGCGGGGGGGCGAGGGGCCGGTCCATCGGCGCTATCGGCGCTATCGGCG AACGGGGAAGCCCGTCGGCCGGCCGGAAGCACGCGGCGCACTCTCTCATG ACGCTTGCCCAGCTGCACAAGCGGCCTGCTGTGTCCAAGGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTAGTCCATTGTCGTTTTCCCGCATCTACTCGTGTGA TACATTGTGGGCTTGTGGTCGAAAGAGCGCAAGCTTGGGGGGGGGCGGGG CGGGGGGGGGGGGCGTTGCCCGTGTCGCGTTAGGTCGTGCCGTTTTTTTG CCTGCGAAATCCCCGAGGGCCGCCCCATCTGGTTCGAAACGTTCCGAAGC GGGGCACAAGTGAACGCATGCCTGCCGAGGGCGGGGTGCGCTGTGTTGCA CGGCGTCGTGTCGTGTTGCATCGATCGTAGCCGGGGCGTGGCAAAGGCGG GAGAGCACGCCGTGACCGCACCTCAGACCCTTGCACCACCGGCCAGTAGC GCGGGCGAAGGTTTTTGTGTTGCCATGGTGTACCCTTGCTAGGGAGTTAT CCTGTGACCACGGGAATCGACTGCGTCAGTGTTGGATTAGTACGGACTCA TGGACGTATTGGTTAGAGAGATCGGAATCGACTGCGTCAGTGTTGGATTA GTACGGACTCATGGAGGTACTGGATGGAGAGACCGGAACGGTTATTAATG TGAAGACAACAACAACAATGATGTGTTTGTTGTTGGTACGGGGTCTCGGA GTGTCTTTGCGCTCTCGTGTTCTGTCGTGGAGTGGCGTTGTACACAACAG CACAGCACTGCTTCGTTCGAGAGCAGCTGTATCGGGTTGGCAGGGCAAGA GGGGCGCCGCGCAGACAGAAACAAGTGCATGGCCTGTGCACCCGTTCTAA CTCTGCGCTTTTTTTGCATGGCGAATGTCATCCAACGTAGGTATGTATGT GCAAACAGGCCGCACGAAGTTATATAAATGCTGCAGGACGTGCGATGATT GTCACAATTTATCTTTGGCAGGAGTAATATCGGACTTGATCAGACCGACC CCCCCTCGTTCTCTCTTCCCCCTCTGCCGCCGTGTGTCCACGATGCCGCC CCAGAACGGACGCTCGGGAGGAAGCCCCGTGCCTGCCTCTGCACCGGCCA GAAAGGAAACAGGCGTCGTCAGCAGCAGCAGGAGGAGTGTTGACGGTCAC GCTCACGGCCGCGGTCGCAGTCACGCTCACGCTCACGCCGTTGACGGGAT GGACACGTCCGCGTGAAGAGAAGCGGGGGCGCAGGAGAAAAATATGAGGG GGGAAGAGGAGCCAACGCTACTTGGACGCGCGGGAAGGTTTTGCTCTTGT TCGACCCGGCCATTGAGAGTTTGTTGTGCTTTGTCGGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7367:730..5518-

>mRNA_L-elsbetiae_contig7367.16238.1 ID=mRNA_L-elsbetiae_contig7367.16238.1|Name=mRNA_L-elsbetiae_contig7367.16238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3474bp|location=Sequence derived from alignment at L-elsbetiae_contig7367:730..5518- (Laminarionema elsbetiae ELsaHSoW15)
ATGTACCCGTCGTCGTCGTCGTCGTCGTCGTCCTCCTCCTGTTCGAGCGG
GCTCGTGATCAACGGCAGCGGGGGCGCCACCCCCTTCACGGCGTTGCTGG
AGGGCGTCCCCGAGGTGGACTCGGTGTGTTCCACGCCCCCCATCGCGAGC
CCGACGTGTTCCTCTCCTGCTGCCGCGGGAGCAGGGGCGGCGGCGGCAGC
GGCGGCGGGGGCAGGGGCGGCGCGGCGTCCCGGCGGGGGGGCCGTGACTG
GAGGTAGGAAAACTCTGATGGAGGTATGCGGGGGGGGCGATGGTTCGGCT
CCACCTGCGGAGCCTTGCGGCAAGAGCCCCGAGGCATCGCCGCCATCGAA
GCACCCCGGAGCCGTGAGGAATGGCCCGGCGGTGGCGATGGGGGCGGTAG
CGGTGGCGGCGGAGAGTGGCACAGAGAACGGCGGCATAGGCGGCGGCGGC
GGCGGCGGCCGTGGGTCAGGGGGGGTGGAGGGGCTGGCCCTGGGGGGGGG
CGCGTCAGCGAGCTGCGGGGTCGGTGGTCGAGAAGACGACGACGGTGACG
ACGATGACGCCGTGGACGGCAGCGAAAATAGGGACCCGAGAAAGATTGCG
AAGGGGGCGGTGGTCGGAGCGCCGGCAGCGGCGGTGGCGTCGACGGCGAC
GGCGACGGTGAAGAGCCCGAAAGCCCGACGGCAGGTCACGCCCGCGGCTG
CGGCTGCGGCAGTGGCAGGGCGGCAGTGCCGAGCTGAACCACCGCCGCCG
CCACAGCAACAGCAGCGGCAAGGTCAGGAGCGACAGCAGTCCGGTGGTGC
CGATGCTGCTGCCGCTGGCGGGCGCGGAGAGGGCGAGGTTGGCGACGAGG
ATGGTGATTTACCAATGCTGTCGCTGTCGCCAGCGCCAGCGCCAACGCTG
ACGCTGACCCCGGCGTTCTCACCGGCCGTGGGTAACAAGGCCGGCGGCGG
TGGCCCCACGGAGGCGGTGAGGGAAACCAAAGGTATTCTAGCACCCGGGG
ACGGCGGCAGAAACGGCAGCTCTCCGTCGAATGGCCCGGCCGGAAAAACC
GGTGACCGGGCGAGTCGCGATGGCGGCAGAGGCTCAGGGCCCGGGGGCGT
TGGGGCGATGGGCGTTGTGGCTGCCGCTGCCGCTGCCGCTTCTGCTGCTG
CTGTTGCCGCGGAGGGTGGCCGTGGCGCGACTTCCGGCGGGCCAAACACC
TCGAGCCCGTTCCGGCAGCCGGACTTCGTCATCAAGATTTGTCTGACGCT
GTACAAGATGTACCCGTCGTCGTCGTCGTCGTCGTCGTCCTCCTCCTGTT
CGAGCGGGCTCGTGATCAACGGCAGCGGGGGCGCCACCCCCTTCACGGCG
TTGCTGGAGGGCGTCCCCGAGGTGGACTCGGTGTGTTCCACGCCCCCCAT
CGCGAGCCCGACGTGTTCCTCTCCTGCTGCCGCGGGAGCAGGGGCGGCGG
CGGCAGCGGCGGCGGGGGCAGGGGCGGCGCGGCGTCCCGGCGGGGGGGCC
GTGACTGGAGGTAGGAAAACTCTGATGGAGGTATGCGGGGGGGGCGATGG
TTCGGCTCCACCTGCGGAGCCTTGCGGCAAGAGCCCCGAGGCATCGCCGC
CATCGAAGCACCCCGGAGCCGTGAGGAATGGCCCGGCGGTGGCGATGGGG
GCGGTAGCGGTGGCGGCGGAGAGTGGCACAGAGAACGGCGGCATAGGCGG
CGGCGGCGGCGGCGGCCGTGGGTCAGGGGGGGTGGAGGGGCTGGCCCTGG
GGGGGGGCGCGTCAGCGAGCTGCGGGGTCGGTGGTCGAGAAGACGACGAC
GGTGACGACGATGACGCCGTGGACGGCAGCGAAAATAGGGACCCGAGAAA
GATTGCGAAGGGGGCGGTGGTCGGAGCGCCGGCAGCGGCGGTGGCGTCGA
CGGCGACGGCGACGGTGAAGAGCCCGAAAGCCCGACGGCAGGTCACGCCC
GCGGCTGCGGCTGCGGCAGTGGCAGGGCGGCAGTGCCGAGCTGAACCACC
GCCGCCGCCACAGCAACAGCAGCGGCAAGGTCAGGAGCGACAGCAGTCCG
GTGGTGCCGATGCTGCTGCCGCTGGCGGGCGCGGAGAGGGCGAGGTTGGC
GACGAGGATGGTGATTTACCAATGCTGTCGCTGTCGCCAGCGCCAGCGCC
AACGCTGACGCTGACCCCGGCGTTCTCACCGGCCGTGGGTAACAAGGCCG
GCGGCGGTGGCCCCACGGAGGCGGTGAGGGAAACCAAAGGTATTCTAGCA
CCCGGGGACGGCGGCAGAAACGGCAGCTCTCCGTCGAATGGCCCGGCCGG
AAAAACCGGTGACCGGGCGAGTCGCGATGGCGGCAGAGGCTCAGGGCCCG
GGGGCGTTGGGGCGATGGGCGTTGTGGCTGCCGCTGCCGCTGCCGCTTCT
GCTGCTGCTGTTGCCGCGGAGGGTGGCCGTGGCGCGACTTCCGGCGGGCC
AAACACCTCGAGCCCGTTCCGGCAGCCGGACTTCGTCATCAAGATTTGTC
TGACGCTGTACAAGGTCCAAAATCAGATCTACCTGCTGGATTTCCAGAAG
CTGGAAGGCGATCCTTTCGGTTTCATGAGCCTCTGTTCGCAGGTCCAAAA
TCAGATCTACCTGCTGGATTTCCAGAAGCTGGAAGGCGATCCTTTCGGTT
TCATGAGCCTCTGTTCGCAGATCATCAACCAGCTCAAGATGCTGAGCGCG
CAGAGCAAGCAGACATCCACCGCCGCGCTCGAGCAGAGCAGGCCGTCCCA
CCGCCGGAGCGCCAGCGAGAGCAGCGGGGGGGCGAGGGGCCGGTCCATCG
GCGCTATCGGCGCTATCGGCGAACGGGGAAGCCCGTCGGCCGGCCGGAAG
CACGCGGCGCACTCTCTCATGACGCTTGCCCAGCTGCACAAGCGGCCTGC
TGTGTCCAAGATCATCAACCAGCTCAAGATGCTGAGCGCGCAGAGCAAGC
AGACATCCACCGCCGCGCTCGAGCAGAGCAGGCCGTCCCACCGCCGGAGC
GCCAGCGAGAGCAGCGGGGGGGCGAGGGGCCGGTCCATCGGCGCTATCGG
CGCTATCGGCGAACGGGGAAGCCCGTCGGCCGGCCGGAAGCACGCGGCGC
ACTCTCTCATGACGCTTGCCCAGCTGCACAAGCGGCCTGCTGTGTCCAAG
AACGGACGCTCGGGAGGAAGCCCCGTGCCTGCCTCTGCACCGGCCAGAAA
GGAAACAGGCGTCGTCAGCAGCAGCAGGAGGAGTGTTGACGGTCACGCTC
ACGGCCGCGGTCGCAGTCACGCTCACGCTCACGCCGTTGACGGGATGGAC
ACGTCCGCGTGAAACGGACGCTCGGGAGGAAGCCCCGTGCCTGCCTCTGC
ACCGGCCAGAAAGGAAACAGGCGTCGTCAGCAGCAGCAGGAGGAGTGTTG
ACGGTCACGCTCACGGCCGCGGTCGCAGTCACGCTCACGCTCACGCCGTT
GACGGGATGGACACGTCCGCGTGA
back to top