mRNA_L-elsbetiae_contig732.16194.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: A0A6H5K2N3_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N3_9PHAE) HSP 1 Score: 193 bits (490), Expect = 2.200e-54 Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 3 Query: 798 PDGAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLNDVADEFDCPGLVEYGRDGCGQIGPMWDLSELE 1160 PDGA DDIVKII+V G NPGG GWADSYSVG +CYM T DHGI LVDTP GEM I++LYD++++GPG G PLYNDIQCGNGP ND ADE +CPGLV G +GCGQIGP WDLSELE Sbjct: 143 PDGAMNDDIVKIIDVPGDNPGGAGWADSYSVGSKCYMSTTFDHGIGEQLVDTPIGEMKIRDLYDMLEKGPGSAGHPLYNDIQCGNGPANDAADETNCPGLVMEGPEGCGQIGPKWDLSELE 263
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D7FZB0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB0_ECTSI) HSP 1 Score: 191 bits (485), Expect = 1.470e-53 Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 3 Query: 792 GAPDGAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLNDVADEFDCPGLVEYGRDGCGQIGPMWDLSEL 1157 G P+GA DDIVKIIEV G NPGG GWADSYSVG +CYM T DHGI LVDTP GE+ I++LYD+++ GPG GRPLYNDIQCGNGP ND ADE +CPGLV G +GCGQIGP WDLSEL Sbjct: 147 GPPEGAMNDDIVKIIEVPGANPGGAGWADSYSVGSKCYMSTTFDHGIGEELVDTPIGEVKIRDLYDMLEAGPGSVGRPLYNDIQCGNGPANDAADETECPGLVMEGPEGCGQIGPKWDLSEL 268
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D8LNN0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN0_ECTSI) HSP 1 Score: 191 bits (484), Expect = 3.890e-53 Identity = 88/124 (70.97%), Postives = 95/124 (76.61%), Query Frame = 3 Query: 786 SGGAPDGAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLNDVADEFDCPGLVEYGRDGCGQIGPMWDLSEL 1157 S G PDGA DDIVKIIEV G PGG GWADSYSVG +CYM T DHGI +VDTP GEM I++LYD++ GPG GRPLYNDIQCGNGP ND ADE +CPGLV G GCGQIGP WDLSEL Sbjct: 167 SDGRPDGAMNDDIVKIIEVPGATPGGAGWADSYSVGSKCYMSTTFDHGIGEEVVDTPIGEMKIRDLYDMLQAGPGSAGRPLYNDIQCGNGPANDAADETECPGLVTEGEAGCGQIGPKWDLSEL 290
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D8LTU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU7_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.490e-50 Identity = 84/127 (66.14%), Postives = 102/127 (80.31%), Query Frame = 3 Query: 786 SGGAPDGAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLND--VADEFDCPGLVEYGRDGCGQIGPMWDLSELE 1160 S P+GAF +DIV+IIEV G +PGG WADSYSVG +CYM T DH I + VDTP+G M I++L+++++ GPG +GRPLYNDIQCGNGP+N + DEF CPGLVEYGR+GCGQIGPMWDLSELE Sbjct: 251 SAATPEGAFSEDIVQIIEVEGTDPGGAYWADSYSVGGKCYMQTTFDHDIGEVEVDTPQGTMKIEDLFNLLEPGPGSEGRPLYNDIQCGNGPVNSDSLGDEFLCPGLVEYGREGCGQIGPMWDLSELE 377
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 189 bits (479), Expect = 2.480e-50 Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 3 Query: 186 DCMVVIIEAESLESFGSWSVVQDSAASGGEYITWEG----DNNKDPDEGDIITTTFDITLPGTYTVQWLMRQPSGSRRGRANDAWLNFPDALRFGHLTSNTIYDGFVKVFGSANNGDFEYDGTAA-EDGIRSEIAVEFLEPGEFLMQIAGRSRGFQLDQIILFEHTLDV-DVAAAGC 698 DCMVVIIEAE L G W +VQD+AASGG YITWEG NN+DP +GDII+T+ I GTY+ +W MRQP G +AND+WLNFPDA RFG ++ Y FVKV+G+A +G F+Y GTA EDG ++IA+EF GE+ M+I GRS G Q+DQI+LF + + A AGC Sbjct: 311 DCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGAHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 194 bits (494), Expect = 3.720e-50 Identity = 99/176 (56.25%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 186 DCMVVIIEAESLESFGSWSVVQDSAASGGEYITWEG----DNNKDPDEGDIITTTFDITLPGTYTVQWLMRQPSGSRRGRANDAWLNFPDALRFGHLTSNTIYDGFVKVFGSANNGDFEYDGTAAED-GIRSEIAVEFLEPGEFLMQIAGRSRGFQLDQIILFEHTLDVDVAAAGC 698 DCMVVIIEAE L G W +VQD+AASGG YITWEG NN DP +GDII+T+ I GTY+ +W MRQP G +AND+WLNFPDA RFG ++ Y FVKV+G+A +G F+Y GTA E+ G ++IA+EF GE+ M+I GRS G Q+DQI+LF +L VD A AGC Sbjct: 730 DCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 185 bits (470), Expect = 2.610e-47 Identity = 92/176 (52.27%), Postives = 116/176 (65.91%), Query Frame = 3 Query: 189 CMVVIIEAESLESFGSWSVVQDSAASGGEYITWEG----DNNKDPDEGDIITTTFDITLPGTYTVQWLMRQPSGSRRGRANDAWLNFPDALRFGHLTSNTIYDGFVKVFGSANNGDFEYDGTAAEDGIRSEIAVEFLEPGEFLMQIAGRSRGFQLDQIILFEHTLDVDVAAA--GC 698 CMVV +EAE L G W VV D+ ASGG+YITWEG NN DP +GDI++ + + GTY+ +WLMRQP G + NDAWLNFPDA R+G + Y F+KV+G A NGDFEY GT + ++IAVEF E GE+ M+I+GRS G Q+DQI++F L VD A A GC Sbjct: 594 CMVVRMEAEDLPVLGDWRVVNDADASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGEDSHGHTQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVANTGC 769
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: D8LTU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU8_ECTSI) HSP 1 Score: 177 bits (450), Expect = 2.580e-44 Identity = 79/121 (65.29%), Postives = 97/121 (80.17%), Query Frame = 3 Query: 804 GAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLN--DVADEFDCPGLVEYGRDGCGQIGPMWDLSELE 1160 GAF +DIV+II+V G PGG WADSYSVG +CYM T DHGI + VDTP+G M I++L+ +++ GPG +GRPLYNDIQCGNGP+N ++ DE CPGLVEYG +GCGQIGP+WDLSELE Sbjct: 766 GAFSEDIVRIIDVEGVVPGGASWADSYSVGSKCYMQTTFDHGIGEVEVDTPQGTMKIEDLFFLLEPGPGSEGRPLYNDIQCGNGPVNSDNILDEIVCPGLVEYGIEGCGQIGPLWDLSELE 886
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: A0A6H5JZU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU9_9PHAE) HSP 1 Score: 152 bits (384), Expect = 5.970e-39 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = 3 Query: 804 GAFVDDIVKIIEVNGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLND--VADEFDCPGLVEYGRDGCGQIGPMWDLSELE 1160 GA +DIV+II+V G PGG W+DSYSVG +CYM T DH I ++VD P+G M I EL+D+++ GPG +PLYNDIQC NGP N + D+ CPGLV+YG CGQIGP+ DLSELE Sbjct: 147 GALSEDIVRIIDVEGVVPGGASWSDSYSVGSKCYMQTTFDHDIGEVVVDPPQGPMKIGELFDLLELGPGSQDQPLYNDIQCENGPTNSHQILDKILCPGLVQYGIKDCGQIGPLRDLSELE 267
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Match: B7GED4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GED4_PHATC) HSP 1 Score: 140 bits (353), Expect = 1.500e-33 Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 819 DIVKIIEV-NGRNPGGVGWADSYSVGDRCYMYTNLDHGIDSMLVDTPRGEMTIQELYDVMDRGPGIDGRPLYNDIQCGNGPLNDVADEFDCPGLVEYGRDGCGQIGPMWDLSELE 1160 DIV +I+V G P G WADSYS G++CY T DH I +LV+TP+G MTI++ +++ GPGI+GRP+YNDIQCGNGP N+ DE CPG + G +GCGQIGP W+ ++ Sbjct: 204 DIVAVIDVVGGVTPNGRSWADSYSFGNKCYCATTFDHDIADVLVETPQGWMTIRQACELLGPGPGIEGRPVYNDIQCGNGPPNNAGDEHVCPGRTDLGPEGCGQIGPRWNFDAIK 318 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig732.16194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig732.16194.1 >prot_L-elsbetiae_contig732.16194.1 ID=prot_L-elsbetiae_contig732.16194.1|Name=mRNA_L-elsbetiae_contig732.16194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=366bp MTRTTMVVAAAALLAACLASQADGRSLQTSPNSSGDDDCMVVIIEAESLEback to top mRNA from alignment at L-elsbetiae_contig732:15038..18480+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig732.16194.1 ID=mRNA_L-elsbetiae_contig732.16194.1|Name=mRNA_L-elsbetiae_contig732.16194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3443bp|location=Sequence derived from alignment at L-elsbetiae_contig732:15038..18480+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig732:15038..18480+ >mRNA_L-elsbetiae_contig732.16194.1 ID=mRNA_L-elsbetiae_contig732.16194.1|Name=mRNA_L-elsbetiae_contig732.16194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2196bp|location=Sequence derived from alignment at L-elsbetiae_contig732:15038..18480+ (Laminarionema elsbetiae ELsaHSoW15)back to top |