mRNA_L-elsbetiae_contig7208.16057.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7208.16057.1
Unique NamemRNA_L-elsbetiae_contig7208.16057.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: D7G537_ECTSI (Glutathione S-transferase n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G537_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 2.580e-87
Identity = 148/224 (66.07%), Postives = 173/224 (77.23%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAAS-SSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYYASK 700
            MP++ TL+YFGLPGR EATRVALAYAGK+FEDN M F  YGA KWAGKG+PVLEMD AEYTQSTA+LRYAGKLGGLYP+  LAALKVDEIVMIAED+M  +F CMG++DDTVAK +L GK                        +KTL+ +L+ K+AA+ SS+F VG+S TIADLQVHA+I N EANFLTG+PTT I DTA  L+ +QAA+LEDPKVKAYYASK
Sbjct:    1 MPSTATLNYFGLPGRGEATRVALAYAGKDFEDNRMGFPEYGACKWAGKGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCMGQEDDTVAKEVLEGK------------------------IKTLVGMLVAKLAANPSSKFFVGNSPTIADLQVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPKVKAYYASK 200          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: D7G5G1_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G1_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.010e-77
Identity = 139/218 (63.76%), Postives = 163/218 (74.77%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAAS-SSEFCVGDSLTIADLQ--VHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPK 676
            MP++ TLHYF  PGRAEATRVALAYAGK+FEDNIM F  YGASKWAG G+PVLEMD AEYTQSTA+LRYAGKLGGLYP+  LAALKVDEIVMIAED+M  +F C+ +KDDT+A GLL GK                        +KTL+E+L +++AA+ SS+F VG   TIADLQ  VHA+I N EANFLTG+PTT I DTA  L+ +QAA+LEDPK
Sbjct:    1 MPSTATLHYFDDPGRAEATRVALAYAGKDFEDNIMGFPEYGASKWAGIGLPVLEMDDAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIAEDVMANMFKCVDQKDDTMANGLLEGK------------------------IKTLVEMLTSRLAANASSKFFVGHPPTIADLQARVHAVIKNFEANFLTGLPTTHIADTAPTLMEMQAALLEDPK 194          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: A0A6H5JNS9_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS9_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.750e-67
Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 2
Query:   68 PGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAAS-SSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKA 685
            PGR EAT VALAY GK+F DN M F+ +GA KWAGKG+PVLEMD AEY QSTA+LRYAGK+GGLYP+  LAAL+VDEIVMIAED++  +F CMG+ DDTVAKG+L GK                        +KTL+E+L+ K+A + SS+F VG+S TIA+LQVHA+I N EANFLT +PTTLI DTA  ++ ++ A+L+DPK KA
Sbjct:   55 PGRGEATGVALAYGGKDFVDNTMGFSEHGACKWAGKGLPVLEMDDAEYFQSTALLRYAGKMGGLYPDDALAALEVDEIVMIAEDVLTNMFKCMGQTDDTVAKGVLEGK------------------------IKTLVEMLVAKLATNQSSKFFVGNSPTIANLQVHAVIKNFEANFLTDLPTTLIADTAPTVMEMEVALLQDPKEKA 237          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: B1N8E9_9PHAE (Glutathione S-transferase 4 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E9_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 8.930e-64
Identity = 125/228 (54.82%), Postives = 153/228 (67.11%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTV----AKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAASS-SEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYYASK 700
            MPA    +YFG+P R EATRVALA AG ++ED  M F  +GA ++  K +PV +MDG +YTQSTA+LRYAGKLGG YPECPLA+LKVDEIVMIAED+   LFS MGEKD+       + L+AGK                        +K LLE +  K+ A+  S FCVG SLTIAD+QVHA+IA V+A FLTGIPTT+++D    L A+  AV+E PKVKAYYASK
Sbjct:    1 MPA--VFNYFGIPARGEATRVALAVAGVDYEDKRMSFEEFGACEF--KTLPVYQMDGTDYTQSTALLRYAGKLGGQYPECPLASLKVDEIVMIAEDVFINLFSTMGEKDEAKKLEKCQTLMAGK------------------------IKDLLEDIARKVEANKCSTFCVGASLTIADIQVHAVIATVQAGFLTGIPTTMVEDICPSLKALDHAVMEHPKVKAYYASK 200          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: D7G5G0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G0_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.170e-58
Identity = 110/176 (62.50%), Postives = 130/176 (73.86%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAAS-SSEFCVGDSLTIADLQ 556
            M ++ TL+YF LPGRAEATRVALAYAGKEF+D  + F  YGA KWAGKG+PVL+MDGAEYTQSTA+LRYAGKLGGLYP+  LAALKVDEIVMI EDI+  +F CMG +DDTVAKG+L GK                        VK L+E+L++K+AA+ SS+F VG S TIADLQ
Sbjct:    1 MSSTPTLNYFELPGRAEATRVALAYAGKEFDDKRLTFPEYGACKWAGKGLPVLQMDGAEYTQSTALLRYAGKLGGLYPDDALAALKVDEIVMIGEDILANMFKCMGAEDDTVAKGVLEGK------------------------VKGLVELLVSKLAANPSSKFFVGTSPTIADLQ 152          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: D7G536_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G536_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.440e-55
Identity = 94/120 (78.33%), Postives = 103/120 (85.83%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGK 391
            MP++ TL+YFGLPGR EATRVAL YAGK+FEDN M F  YGA KWAGKG+PVLEM+G EYTQSTA+LRYAGKLGGLYPE  LAALKVDEIVMI EDIM  +F CMGEK DTVAKG+L GK
Sbjct:    1 MPSTATLNYFGLPGRGEATRVALVYAGKDFEDNRMGFPEYGACKWAGKGLPVLEMNGFEYTQSTALLRYAGKLGGLYPEDALAALKVDEIVMIGEDIMANMFKCMGEKGDTVAKGVLDGK 120          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: A0A6H5JE39_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE39_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 4.790e-41
Identity = 105/234 (44.87%), Postives = 137/234 (58.55%), Query Frame = 2
Query:   89 RVALAYAGKEFEDNIMDFAGYGASKWAGKGVP----VLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAAS-SSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYYASKE---A*SSRSWQRFVDNSKAHTRWL 766
            R      G    D +++  G   +K   K +P       M+ AEY QST +LRYAGKLGGLYP+  LAALKVDEIVMIAED++  +  C G+KDDTVAKG+L GK                        +KTL+++L+ K+AA+ SS F VG+S  IADLQVHA+I N +ANFLTG+PTT I DTA  L+ ++AA++EDPKV     + E   +  S SW   V +      WL
Sbjct:  265 RTTAKQQGTTMVDELLECLGCSTAKGLSKPIPNKTSTRAMNDAEYFQSTTLLRYAGKLGGLYPDDALAALKVDEIVMIAEDVLTNMSKCTGQKDDTVAKGVLVGK------------------------IKTLVDMLVAKLAANPSSMFFVGNSPNIADLQVHAVIKNSQANFLTGLPTTHIVDTAPTLMEMEAALVEDPKVVGNGDTDELVPSVGSGSWCGVVRDKGPGDSWL 474          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.340e-22
Identity = 79/224 (35.27%), Postives = 112/224 (50.00%), Query Frame = 2
Query:   32 MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWA--GKGVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAASSSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYYAS 697
            M  ++ L YF LPGRA  TR+A    G +FED I+    + A K +  GK +PVLE++G  Y +S A+LRYAGKL GLYP  P+ ALK D ++ + +    K+ + + E D        A K+    + L   +L             TL   L  ++      FC+GD LTIADL++   +  +    L GIP + I D    + A+  A     KV  YYAS
Sbjct:    8 MATTIKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDSLPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPD--------AEKKMKMREELASQTL------------PTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWI-DPFTKVKAIVEATKNHEKVAEYYAS 210          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: A0A7Y3G0D8_9GAMM (Glutathione S-transferase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3G0D8_9GAMM)

HSP 1 Score: 103 bits (258), Expect = 4.360e-22
Identity = 75/221 (33.94%), Postives = 113/221 (51.13%), Query Frame = 2
Query:   50 LHYFGLPG-RAEATRVALAYAGKEFEDNIMDFAGYGASKWAGK--GVPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKLFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAASSSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYYASKE 703
            L YF   G RAE  R+A   AG +FEDN + FA +G  +   +   VPVLE+DGA  TQS AM RY GK+ GLYP+  L AL  DE +   ED++  + +  G + D +       KR+    A  W S+ +             L+ L+T+       F   + +T+ADL+V     ++ A  L  +P  +++  A  L+  +  +  DP+V AYYAS++
Sbjct:    6 LTYFDFDGGRAEPVRIAFHAAGIKFEDNRISFAEFGKMRKTTRFNSVPVLEIDGAAVTQSNAMCRYIGKMAGLYPDDDLQALYCDEAMDAIEDLLHDIVATFGLQGDEL-------KRAREKLADGWLSVYLRG-----------LDELLTR---GGGNFFADNRMTVADLKVFMQTRSLLAGTLDHVPADIVERLAPGLVGHKKRIESDPRVVAYYASRQ 205          
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Match: A0A6T6V779_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6V779_9EUKA)

HSP 1 Score: 102 bits (254), Expect = 3.540e-21
Identity = 81/224 (36.16%), Postives = 112/224 (50.00%), Query Frame = 2
Query:   50 LHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKG----VPVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGKL-FSCMG-----EKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLEVLITKIAASSSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTAAPLLAVQAAVLEDPKVKAYY 691
            L YF + GRA   R+A      +F+DN + F  +G +K AG+     VPVL +DG +  +S A+LRY G+L  LYPE P+ A +VDEIV + E+    + F+ +      EK D   K  + G  +      +   L    A++E                  +  FCVG SL+IADL+V   I N++A FL GI  TL  D A   LAV   V E P V AY+
Sbjct:   35 LTYFPIGGRALEIRLAFNIGKIDFKDNRLTFPEFGKAKAAGEFKYGVVPVLSVDGVQMGESLAILRYVGQLAKLYPEDPMEAFRVDEIVNVMENPSSAITFTLVPQRFGLEKFDEKEKMRIRGFINEKVLPPFIAGLEKTLAKNE------------------TKGFCVGSSLSIADLKVFGSIRNIKAGFLDGISDTLY-DKAPCCLAVYKTVSEHPSVVAYF 239          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7208.16057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G537_ECTSI2.580e-8766.07Glutathione S-transferase n=4 Tax=Ectocarpus silic... [more]
D7G5G1_ECTSI2.010e-7763.76Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JNS9_9PHAE1.750e-6758.94GST C-terminal domain-containing protein n=1 Tax=E... [more]
B1N8E9_9PHAE8.930e-6454.82Glutathione S-transferase 4 n=1 Tax=Laminaria digi... [more]
D7G5G0_ECTSI1.170e-5862.50Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D7G536_ECTSI1.440e-5578.33Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JE39_9PHAE4.790e-4144.87DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2V6C7_9STRA1.340e-2235.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7Y3G0D8_9GAMM4.360e-2233.94Glutathione S-transferase n=1 Tax=Woeseiaceae bact... [more]
A0A6T6V779_9EUKA3.540e-2136.16Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7208contigL-elsbetiae_contig7208:193..3367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.0
Seed ortholog evalue9.4e-20
Seed eggNOG ortholog529818.AMSG_06014T0
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
EggNOG free text desc.glutathione transferase activity
EggNOG OGsKOG1695@1,KOG1695@2759,KOG3417@1,KOG3417@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Exons7
Model size1389
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7208.16057.1prot_L-elsbetiae_contig7208.16057.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7208 873..3336 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.644884-UTR-L-elsbetiae_contig7208:192..8721622816802.644884-UTR-L-elsbetiae_contig7208:192..872Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7208 193..872 -
1691683824.9507673-UTR-L-elsbetiae_contig7208:192..8721691683824.9507673-UTR-L-elsbetiae_contig7208:192..872Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7208 193..872 -
1622816802.7447557-UTR-L-elsbetiae_contig7208:3336..33671622816802.7447557-UTR-L-elsbetiae_contig7208:3336..3367Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7208 3337..3367 -
1691683825.0340228-UTR-L-elsbetiae_contig7208:3336..33671691683825.0340228-UTR-L-elsbetiae_contig7208:3336..3367Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7208 3337..3367 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.656096-CDS-L-elsbetiae_contig7208:872..9051622816802.656096-CDS-L-elsbetiae_contig7208:872..905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 873..905 -
1691683824.9644177-CDS-L-elsbetiae_contig7208:872..9051691683824.9644177-CDS-L-elsbetiae_contig7208:872..905Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 873..905 -
1622816802.6754222-CDS-L-elsbetiae_contig7208:1477..15971622816802.6754222-CDS-L-elsbetiae_contig7208:1477..1597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 1478..1597 -
1691683824.9747624-CDS-L-elsbetiae_contig7208:1477..15971691683824.9747624-CDS-L-elsbetiae_contig7208:1477..1597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 1478..1597 -
1622816802.688303-CDS-L-elsbetiae_contig7208:2046..21391622816802.688303-CDS-L-elsbetiae_contig7208:2046..2139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2047..2139 -
1691683824.984-CDS-L-elsbetiae_contig7208:2046..21391691683824.984-CDS-L-elsbetiae_contig7208:2046..2139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2047..2139 -
1622816802.6989825-CDS-L-elsbetiae_contig7208:2261..23331622816802.6989825-CDS-L-elsbetiae_contig7208:2261..2333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2262..2333 -
1691683824.9935021-CDS-L-elsbetiae_contig7208:2261..23331691683824.9935021-CDS-L-elsbetiae_contig7208:2261..2333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2262..2333 -
1622816802.7109077-CDS-L-elsbetiae_contig7208:2447..25491622816802.7109077-CDS-L-elsbetiae_contig7208:2447..2549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2448..2549 -
1691683825.002573-CDS-L-elsbetiae_contig7208:2447..25491691683825.002573-CDS-L-elsbetiae_contig7208:2447..2549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2448..2549 -
1622816802.7227764-CDS-L-elsbetiae_contig7208:2883..29791622816802.7227764-CDS-L-elsbetiae_contig7208:2883..2979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2884..2979 -
1691683825.0124342-CDS-L-elsbetiae_contig7208:2883..29791691683825.0124342-CDS-L-elsbetiae_contig7208:2883..2979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 2884..2979 -
1622816802.7341833-CDS-L-elsbetiae_contig7208:3174..33361622816802.7341833-CDS-L-elsbetiae_contig7208:3174..3336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 3175..3336 -
1691683825.0230176-CDS-L-elsbetiae_contig7208:3174..33361691683825.0230176-CDS-L-elsbetiae_contig7208:3174..3336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7208 3175..3336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7208.16057.1

>prot_L-elsbetiae_contig7208.16057.1 ID=prot_L-elsbetiae_contig7208.16057.1|Name=mRNA_L-elsbetiae_contig7208.16057.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MPASMTLHYFGLPGRAEATRVALAYAGKEFEDNIMDFAGYGASKWAGKGV
PVLEMDGAEYTQSTAMLRYAGKLGGLYPECPLAALKVDEIVMIAEDIMGK
LFSCMGEKDDTVAKGLLAGKRSNTTKALYWTSLLVPAARSEREIVKTLLE
VLITKIAASSSEFCVGDSLTIADLQVHALIANVEANFLTGIPTTLIKDTA
APLLAVQAAVLEDPKVKAYYASKEA*
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mRNA from alignment at L-elsbetiae_contig7208:193..3367-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7208.16057.1 ID=mRNA_L-elsbetiae_contig7208.16057.1|Name=mRNA_L-elsbetiae_contig7208.16057.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3175bp|location=Sequence derived from alignment at L-elsbetiae_contig7208:193..3367- (Laminarionema elsbetiae ELsaHSoW15)
CAGCATCAGCAAGATCAACACAAACCTCAACATGCCTGCTTCCATGACCC TCCACTACTTCGGACTCCCCGGCCGCGCCGAGGCTACCCGGGTGGCCCTC GCCTACGCCGGAAAGGAATTCGAGGACAACATCATGGACTTCGCGGGGTA CGGCGCCTCCAAGTGGGCTGGGAAGGGCGTCCCCGTTCTCGAGGTGAGCA CACGAGAGGGAGAGAGAGAGAGAGAGAGAGAAAGAGAGCTACAGGAGGTT TGGTCTGGAGCTTTAGAGATATGAGTAGATTCGAGAGAGATTTAAGATAT CGCTACTATATTCTAGAGGTGCCATTCATACCTGTTTGACGCTTCAACCT CGGTCTCCCCCCTTTGTTTGGTTGGGCTCTTGATTCAGATGGACGGCGCG GAGTACACCCAGTCGACGGCCATGCTTCGATACGCCGGCAAGTTGGGGGG CCTCTACCCCGAATGCCCGCTCGCCGCTCTCAAGGTACACATACATACAT ACATACTGGTGCTGTGGTGTCGATGGGTGTTTTAACGTTGAGGCTGCTGC TGCTGCTGCTGCGTCTGTTTAACCCGCGTCCTCGCCGCTGATGGAGTTGG ATGTTCGCCTCGGTGAAGTGCTACTTGCGCGTCTACTCTATAAAACCCGC CTATTGCGTGTTCCAGTTACCAACTATGTGCTAAAAGTGCTGTGTGCTTC GGGTGTTAGATCTATATCCTTTTTTGTGTTGGTTTTTTCAAAACAAAATT CGTGTTCTTCTCCCGCCAGCATCTGACTATTTTTACCGAACTATTCTCGC CGAAACCTGATGAACCAGGTCGACGAGATCGTGATGATCGCGGAGGACAT CATGGGAAAGCTCTTCTCTTGCATGGGGGAGAAGGATGACACCGTCGCCA AGGGCTTGCTGGCGGGAAAGGTATGCACGCACGTAGATCTGTTTGCATGC ACCAGAGCGCCTCTCTCCTACGGCGAGAGAGGCACACAATTTAAGAAGTC AACGAATGGCACGACAGAGAGAGCCAGGATCAAGCGGTCAAATACCACGA AAGCGTTGTACTGGACAAGCCTCTTGGTTCCTGCAGCTCGGTCGGAAAGA GAGATCGTTTGAGGTTTTTAGCGTGAGCGTGAGAGTGGGACCCCCGACTT GACCTGTTTCCGATCTTCCCTCCCCGTCATTGCTGGCGTGTCTTTTTTTG TTTCATGCCCTCGCGGCTAAATGCACAGGTCAAGACGCTCCTCGAGGTGC TGATCACCAAGATCGCGGCTTCGTCTTCCGAGTTCTGCGTGGGCGACTCC CTCACGATCGCCGACCTCCAGGTGCGTTGCTGTTGTTGTTGTCGTCGTCG TCGTTGTTGCCATCGGTGTTAATGGCGTGTTCTTGCTCTCTCCGCATCGC TTTTATCTATCGCATTTCAAGTGGGAGCGAGGTTACTATCCGTTGCCGTC TTCGGTCGGCGGCACGTTTTATGGCAGCAGCATCTGGGGCCGGTGCTCCT TGTCGGAGGGGGATGCGTGGTCGATAATAACGTGTTTCGCCAGCAACAGT TCACGACATACCGTAGGTGACACAGTATACCACACCCCCTGGACCGACTT TTAGAGCTACATTGCTCCCAAACGAGGAGGGCGCCAGCACCAAACGACAC GTTTTCGCGCAGCCCTCGACTAGATCTTCCCAACGCCACCCACCCCCTTT CGGCACGCCAGCCCCCCCACCCCACACCTGACCCGAGCTATATGGAAATT ATGCCTTTGGTACTACACAGGTGCACGCGCTCATCGCGAACGTGGAGGCG AACTTCCTGACTGGCATCCCCACCACCCTCATAAAGGATACCGCGGCGCC CCTGCTGGCGGTGCAGGCTGCCGTTCTGGAGGACCCGAAGGTGACTTGGT GTGCCCTTTGAGTCGGTTGTTGTTGCTGCTGCTGCTGTGTGCTGAAAAGT GTTGGCCTGATGCTGCTGCTCCGTGTCGCATATTTCGCCGGCAACATGGG TTGCCATTGTTCGGGTCGCGATGTAGACCTTACACCTGACTCTGTACTAT GGTACACATCGTTCCGCTTGGCTCAGAGGATTTTATAAGAAAGCGTTTCA GGGTGTCTGCAAAATGTGTGTACCTTTTTTCAGCCAAAGTGAAACAAGCC TGTTTCTGTAGTCTAGGCGTTATCTGTCGATCTGCCACATCTGTATTATT GTACAATCGTGCTAAATGGCGATCTATCTGACCTTGGAAGAATATCGTCG AGATCTTCCCAAATTTAACATGTTTTGTTAGTCGTACCCTCGCGGTTGTG GAGCAAATTGGCTTCGAAAAATGTTTACACCCCTGGGGCGTTCTCAAGGG ATATTACGGTATCTACCAATAACACATCTTTCTTTCACAATCAATCACTC ATCTTCCCTTCCCTTGTTTTTTCTCAAATCCCATGGTTGAATATCACCGC TCACGAATACAGGTGAAGGCATACTACGCATCCAAGGAGGCATAATCCAG TCGGTCTTGGCAACGTTTTGTGGACAACAGTAAAGCGCACACCAGGTGGC TGGGATAGACGAAGAGGCCGGTGCGCAGCAAAGCCCACCCATGCAGGCGA GGATATCGTCGGCGTTCCTCTCCCGTGTCCGCGTTTCAAGCACAAGCAAT AACGAAGCTCTTGCATATACATAGGAAGAGGAGGATTTGTGAGGCTGTTG GCGTGCTGCCGGGTCTGGAAAAACGGTATGTAGTGTTGTAGCAGCCGCAA GAGGACGTTGGAAGTGAATGTTGTCTGTTGGATTGGAGGCAGACACGGCG CTGTGTGGTCACCTTGCTGCTTGTTTGGGCGGGCTGATCTTCTTGCGTTC GGTGTACGTGTTTTTGTGTGTACATAGTATCTACAAGTGCATCATGTTTT GTCGAGTTTCTCCGCGCGGTTGGTCGACGCGGGTTCAGATCGATTTTTGC GGGGGCCCCGAGGGCGTCCCATCTCCGGAGACGGCGTACGTACGTACGTA CGTGTCTGTTGCTAATAATCGCGGTCAGTGGGGTGGAGAGACCAGCATTC GGGCTGCTGGTGTTGTTTATTGTCGGGAGGGGGCACGCTAGTGTGTGGTG TTGTCAGGGGGGGCTGAGCTGGTGTCAGAAGTATAGTAGTCCTGTGTGGC CATTGTTGTAGTAGCGTCAGTCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7208:193..3367-

>mRNA_L-elsbetiae_contig7208.16057.1 ID=mRNA_L-elsbetiae_contig7208.16057.1|Name=mRNA_L-elsbetiae_contig7208.16057.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig7208:193..3367- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTGCTTCCATGACCCTCCACTACTTCGGACTCCCCGGCCGCGCCGA
GGCTACCCGGGTGGCCCTCGCCTACGCCGGAAAGGAATTCGAGGACAACA
TCATGGACTTCGCGGGGTACGGCGCCTCCAAGTGGGCTGGGAAGGGCGTC
CCCGTTCTCGAGATGCCTGCTTCCATGACCCTCCACTACTTCGGACTCCC
CGGCCGCGCCGAGGCTACCCGGGTGGCCCTCGCCTACGCCGGAAAGGAAT
TCGAGGACAACATCATGGACTTCGCGGGGTACGGCGCCTCCAAGTGGGCT
GGGAAGGGCGTCCCCGTTCTCGAGATGGACGGCGCGGAGTACACCCAGTC
GACGGCCATGCTTCGATACGCCGGCAAGTTGGGGGGCCTCTACCCCGAAT
GCCCGCTCGCCGCTCTCAAGATGGACGGCGCGGAGTACACCCAGTCGACG
GCCATGCTTCGATACGCCGGCAAGTTGGGGGGCCTCTACCCCGAATGCCC
GCTCGCCGCTCTCAAGGTCGACGAGATCGTGATGATCGCGGAGGACATCA
TGGGAAAGCTCTTCTCTTGCATGGGGGAGAAGGATGACACCGTCGCCAAG
GGCTTGCTGGCGGGAAAGGTCGACGAGATCGTGATGATCGCGGAGGACAT
CATGGGAAAGCTCTTCTCTTGCATGGGGGAGAAGGATGACACCGTCGCCA
AGGGCTTGCTGGCGGGAAAGCGGTCAAATACCACGAAAGCGTTGTACTGG
ACAAGCCTCTTGGTTCCTGCAGCTCGGTCGGAAAGAGAGATCCGGTCAAA
TACCACGAAAGCGTTGTACTGGACAAGCCTCTTGGTTCCTGCAGCTCGGT
CGGAAAGAGAGATCGTCAAGACGCTCCTCGAGGTGCTGATCACCAAGATC
GCGGCTTCGTCTTCCGAGTTCTGCGTGGGCGACTCCCTCACGATCGCCGA
CCTCCAGGTCAAGACGCTCCTCGAGGTGCTGATCACCAAGATCGCGGCTT
CGTCTTCCGAGTTCTGCGTGGGCGACTCCCTCACGATCGCCGACCTCCAG
GTGCACGCGCTCATCGCGAACGTGGAGGCGAACTTCCTGACTGGCATCCC
CACCACCCTCATAAAGGATACCGCGGCGCCCCTGCTGGCGGTGCAGGCTG
CCGTTCTGGAGGACCCGAAGGTGCACGCGCTCATCGCGAACGTGGAGGCG
AACTTCCTGACTGGCATCCCCACCACCCTCATAAAGGATACCGCGGCGCC
CCTGCTGGCGGTGCAGGCTGCCGTTCTGGAGGACCCGAAGGTGAAGGCAT
ACTACGCATCCAAGGAGGCATAAGTGAAGGCATACTACGCATCCAAGGAG
GCATAA
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